                         SEQUENCE LISTING

<110>  Walker, Stephen
       Krigsman, Arthur
 
<120>  IDENTIFICATION OF UNIQUE GENE EXPRESSION PROFILES IN CHILDREN 
       WITH REGRESSIVE AUTISM SPECTRUM DISORDER (ASD) AND ILEOCOLITIS

<130>  205286-0008WO1 (00023)

<150>  US 61/761,510
<151>  2013-02-06

<160>  3     

<170>  PatentIn version 3.5

<210>  1
<211>  8769
<212>  DNA
<213>  Homo sapiens

<400>  1
atttagaggc ggcgccaggg cggccgcgga gaaacgtgac acaccagccc tctcggaggg       60

gtttcggacc gaagggaaga agctgcgccg tgtcgtccgt ctccctgcgc gccgcgggca      120

cttctcctgg gctctccccg aactctcccg cgacctctgc gcgccctcag gccgccttcc      180

ccgccctggg ctcgggacaa cttctggggt ggggtgcaaa gaaagtttgc ggctcctgcc      240

gccggcctct ccgcctcttg gcctaggagg ctcgccgccc gcgcccgctc gttcggcctt      300

gcccgggacc gcgtcctgcc ccgagaccgc caccatgaac aagctttaca tcggcaacct      360

caacgagagc gtgacccccg cggacttgga gaaagtgttt gcggagcaca agatctccta      420

cagcggccag ttcttggtca aatccggcta cgccttcgtg gactgcccgg acgagcactg      480

ggcgatgaag gccatcgaaa ctttctccgg gaaagtagaa ttacaaggaa aacgcttaga      540

gattgaacat tcggtgccca aaaaacaaag gagccggaaa attcaaatcc gaaatattcc      600

accccagctc cgatgggaag tactggacag cctgctggct cagtatggta cagtagagaa      660

ctgtgagcaa gtgaacaccg agagtgagac ggcagtggtg aatgtcacct attccaaccg      720

ggagcagacc aggcaagcca tcatgaagct gaatggccac cagttggaga accatgccct      780

gaaggtctcc tacatccccg atgagcagat agcacaggga cctgagaatg ggcgccgagg      840

gggctttggc tctcggggtc agccccgcca gggctcacct gtggcagcgg gggccccagc      900

caagcagcag caagtggaca tcccccttcg gctcctggtg cccacccagt atgtgggtgc      960

cattattggc aaggaggggg ccaccatccg caacatcaca aaacagaccc agtccaagat     1020

agacgtgcat aggaaggaga acgcaggtgc agctgaaaaa gccatcagtg tgcactccac     1080

ccctgagggc tgctcctccg cttgtaagat gatcttggag attatgcata aagaggctaa     1140

ggacaccaaa acggctgacg aggttcccct gaagatcctg gcccataata actttgtagg     1200

gcgtctcatt ggcaaggaag gacggaacct gaagaaggta gagcaagata ccgagacaaa     1260

aatcaccatc tcctcgttgc aagaccttac cctttacaac cctgagagga ccatcactgt     1320

gaagggggcc atcgagaatt gttgcagggc cgagcaggaa ataatgaaga aagttcggga     1380

ggcctatgag aatgatgtgg ctgccatgag cctgcagtct cacctgatcc ctggcctgaa     1440

cctggctgct gtaggtcttt tcccagcttc atccagcgca gtcccgccgc ctcccagcag     1500

cgttactggg gctgctccct atagctcctt tatgcaggct cccgagcagg agatggtgca     1560

ggtgtttatc cccgcccagg cagtgggcgc catcatcggc aagaaggggc agcacatcaa     1620

acagctctcc cggtttgcca gcgcctccat caagattgca ccacccgaaa cacctgactc     1680

caaagttcgt atggttatca tcactggacc gccagaggcc caattcaagg ctcagggaag     1740

aatctatggc aaactcaagg aggagaactt ctttggtccc aaggaggaag tgaagctgga     1800

gacccacata cgtgtgccag catcagcagc tggccgggtc attggcaaag gtggaaaaac     1860

ggtgaacgag ttgcagaatt tgacggcagc tgaggtggta gtaccaagag accagacccc     1920

tgatgagaac gaccaggtca tcgtgaaaat catcggacat ttctatgcca gtcagatggc     1980

tcaacggaag atccgagaca tcctggccca ggttaagcag cagcatcaga agggacagag     2040

taaccaggcc caggcacgga ggaagtgacc agcccctccc tgtcccttcg agtccaggac     2100

aacaacgggc agaaatcgag agtgtgctct ccccggcagg cctgagaatg agtgggaatc     2160

cgggacacct gggccgggct gtagatcagg tttgcccact tgattgagaa agatgttcca     2220

gtgaggaacc ctgatctctc agccccaaac acccacccaa ttggcccaac actgtctgcc     2280

cctcggggtg tcagaaattc tagcgcaagg cacttttaaa cgtggattgt ttaaagaagc     2340

tctccaggcc ccaccaagag ggtggatcac acctcagtgg gaagaaaaat aaaatttcct     2400

tcaggtttta aaaacatgca gagaggtgtt ttaatcagcc ttaaaggatg gttcatttct     2460

tgaccttaat gtttttccaa tcttcttccc cctacttggg taattgatta aaatacctcc     2520

atttacggcc tctttctata tttacactaa tttttttatc tttattgcta ccagaaaaaa     2580

atgcgaacga atgcattgct ttgcttacag tattgactca agggaaaaga actgtcagta     2640

tctgtagatt aattccaatc actccctaac caataggtac aatacggaat gaagaagagg     2700

ggaaaatggg gagaaagatg gttaaaatac ataataatcc acgtttaaaa ggagcgcact     2760

tgtggctgat ctatgccaga tcaccatctt caaattggca caactgaaat ttccccactc     2820

tgttggggct tccccaccac attcatgtcc ctctcccgtg taggtttcac attatgtcca     2880

ggtgcacata ggtggtattg aatgctcagc agggtagggg ctgaccactg tccctgattc     2940

ccatcgttct caggcggatt ttatattttt ttaaagtcta ttttaatgat tggatatgag     3000

cactgggaag gggacgctaa ctccccttga taaagtctcg gttccatgga ggacttgagt     3060

ggccccaaag gctgccacgg tgccctcacc ccagcccatg tgctcccata agggctggtt     3120

cctagaggca ggggttgtgg ggcactccca gccacggcac tgttaccttg gtggtgggac     3180

ttggaaccca accctgagct cccgataaag ctaaagtcca tcatctggca aattcagtaa     3240

attggagagt acttgcttct gtttgtatct gagaggaatt tttaactgac ggcttctgtc     3300

tccatgaatc attatcagca tgatgaaagg tgtgtctaaa aaacaattca gaataccagc     3360

agcattgtac agcaaggggt aaataagctt aatttattaa tttaccaggc ttaattaaga     3420

tcccatggag tgtttagccc ttgtgggaga cagaagccat cagttaaatg aggttaggcc     3480

tctcctccta atatactgat tgacaatgca tattagccag gtaatgcact ttagctaccc     3540

tggacaatgc tatcaagtgt gctgggaagg gaggaaggcc tctctacata tggaaaagcc     3600

catgcgtgga gttcccctcc tttcaacatt gcaacaacag taacaacaag acaaccgcaa     3660

catgtgggcg tagtcaggca atgctgtgtg cgaagtaaac tacctcaagg tatgaagtta     3720

cctcagcaat tattttcctt tttgttcccc ccaaccccat taaaaaaatt tttttttgat     3780

ttttgttttt ttgcagcttg ctgatatttt atataaaaaa gaaaagcaaa gcaaaagaga     3840

agctgatagt cttgaatatt ttattttttt aatgaaaaga aaaaacaaga aagttatgtt     3900

tcataatttc ttacaacatg agccagtaac cctttaggaa ctctctatgg agaacaggcc     3960

tggtgggaaa ggctttgggg gctgccccct taggaggagg ctagtgctaa gagggaaggc     4020

ccaggtttga gagagcccag aggggcagag cccagagcct tgtttggccc tgatctctga     4080

cttctagagc cccagctgct ggcggctgct ggaatatcct acctgatagg attaaaaggc     4140

ctagtggagc tgggggctct cagtggttaa acaatgccca acaaccaacc agctggccct     4200

tggtctcctc tctttcctcc tttggttaaa gagcatctca gccagctttt cccaccagtg     4260

gtgctgttga gatattttaa aatattgcct ccgttttatc gaggagagaa ataataacta     4320

aaaaatatac cctttaaaaa aacctatatt tctctgtcta aaaatatggg agctgagatt     4380

ccgttcgtgg aaaaaagaca aggccaccct ctcgccctca gagaggtcca cctggtttgt     4440

cattgcaatg cttttcattt tttttttttg ttattgtttc atttcagttc cgtcttgcta     4500

ttcttcctaa tctatatcca tagatctaag gggcaaacag atactagtta actgccccca     4560

cctctgtctc cctgtcttct ttagatcggt ctgattgatt ttaaaagtgg acccaaactt     4620

agggaattct tgatttaggg tggctggtgg caaggagggg caggggatat ggggacgtga     4680

ctgggacagg ttcctgcctt atcattttct ccctaggaca ttcccttgta gcccccagaa     4740

ttgtctggcc caaattgaat agaagcagaa aaacatttag ggataacatc aggccagtag     4800

aattaagcct ctccacctgt cccaaccata aaaagggtct cccagctttc catctctggc     4860

tctatatgct ttatcccaaa acaaagcaga taacgttcag acgtcggcca tttagtaatt     4920

taaagcgaat ttccagcagc aagcatgctt tgatatctgg ttcagactat catcaggaag     4980

aaaaaaaaat cccacagtac ctgaaatgtg attgttgcag tgttcagttt ccttgggggc     5040

ctgctccctt cacaccttga gcccaagtcc ttttccgttg gctgattcag ctcccagaag     5100

agacgaggaa gtgtgtggca agggactgga aaacttcact tgcttggatt aggcaaggct     5160

ccactcattg ttgatatttg cccagcagga aaatcatgta agttatacca ccagaaagca     5220

aaaggagcat ggtttggtgg ttaaggttta gtgggatgaa ggacctgtct tggtgggccg     5280

ggccctcttg tgccccgtag gctaggtctt agggcaactc cttgccctcc tgctcagcac     5340

ctccatttcc ccatccttgg tgagataaca agctatcgcg aaaagcactt gggagatttg     5400

gatgatttga gaagagtgac ttaaaaaaaa tgcttctgtg ctctaagata tatatgtgtg     5460

tgtgtgtgct acatatatat ttttaagaaa ggaccatctc tttaggatat atttttaaat     5520

tctttgaaac acataaccaa aatggtttga ttcactgact gactttgaag ctgcatctgc     5580

cagttacacc ccaaatggct ttaatcccct ctcgggtctg gttgcctttt gcagtttggg     5640

ttgtggactc agctcctgtg aggggtctgg ttaggagaga gccattttta aggacaggga     5700

gttttatagc ccttttctac tttcctcccc tcctcccagt ccttatcaat cttttttcct     5760

ttttcctgac cccctccttc tggaggcagt tgggagctat ccttgtttat gcctcactat     5820

tggcagaaaa gaccccattt aaaacccaga gaacactgga gggggatgct ctagttggtt     5880

ctgtgtccat tttcctctgt gccaaagaca gacagacaga ggctgagaga ggctgttcct     5940

gaatcaaagc aatagccagc tttcgacaca tacctggctg tctgaggagg aaggcctcct     6000

ggaaactggg agctaagggc gaggcccttc ccttcagagg ctcctggggg attagggtgt     6060

ggtgtttgcc aagccaaggg gtagggagcc gagaaattgg tctgtcggct cctggttgca     6120

ctttggggaa ggagaggaag tttggggctc caggtagctc cctgttgtgg gactgctctg     6180

tcccctgccc ctactgcaga gatagcactg ccgagttccc ttcaggcctg gcagacgggc     6240

agtgaggagg ggcctcagtt agctctcaag ggtgccttcc cctcctccca acccagacat     6300

accctctgcc aaactgggaa ccagcagtgc tagtaactac ctcacagagc cccagagggc     6360

ctgcttgagc cttcttgctc cacaggagaa gctggtgcct ctaggcaacc ccttcctccc     6420

acctctcatc aggggtgggg gttctccttt ctttcccctg aagtgtttat ggggagatcc     6480

tagtggcttt gccattcaaa ccactcgact gtttgcctgt ttcttgaaaa ccagtagaag     6540

ggaaacagca cagcctgtca cagtaattgc aggaagattg aagaaaaatc ctcatcaatg     6600

ccaggggaca taaaagccat ttcccttcca aatactcgac aatttagatg cagaacattt     6660

ctctgtattc agacttagag taacaccagc tgaaaactgc agtttctttc ctttggatac     6720

ataaggcttc tctatcgggg tacgggacag ggaggaggcc tcatgtctga agggggattt     6780

aggggcgaga gccccagccc tgaccctcgg tcctgtgcac cgctttgggg cacagtctga     6840

tggcgccttt gctggcgcct tagtatggtt gactccggat ggacaaaaga aaaaaaattt     6900

tttttcttga atgaaatagc aggaagctcc tcgggagcat gtgttttgat taaccgcagg     6960

tgatggatgc tacgagtata aatggattaa ctacctcaat ccttacagta agattggaac     7020

taagggcagg gactcatgca taagggtatg aatcccagcc aggacaagtg agttgaggct     7080

tgtgccacaa aaggtttgtc cttggggaac aggcaggcct gccaggatcc cccccatatc     7140

gattgggctg ggagggctgg ccatgaggtc cccactttct gctttccttg cccatgtgtc     7200

acccctttgg cctccagctt gtccctctct cactttctat agctttgttg gaccagatgg     7260

tgaggaaagg aatggcctct tcccttctag agggggctgg ctggagtgag acctggggct     7320

tggcctggaa cccaccacac agccccaaag tcaggaagcc tggggaaacc agagctgaga     7380

cctcttcaac agggtttctt tgagatccta cacctccatt gggccctttt tcagtcttca     7440

atgggggccc agttggctct agaaggagaa gaggtgaagc aggatccttt gccctggggg     7500

agtctgaggg cgcggtcctt ggactcattc aggccgtctt tgtagttggg ggagttccac     7560

tgggcgatcc cagcccctcc ccacccaccc tctaatggac ctcctcatag aagccccatt     7620

tcacttttgt tttatctacc tcttagcaaa acaatagata aattaggtag tggcagctcc     7680

acttgcttag gttagggggg gaaaaagatt tctttttcca aaggaaaaaa atattacctt     7740

gagaatactt tccaaaaaat aaaattaaaa aaaaaaaaac caaaaaaaaa aatttttttt     7800

taaaagggag acattttcca gtgaccactg gattgtttta atttcccaag cttttttttc     7860

ccccataaat aagtttcact ctttggcgat tttcttcact tgtttaagat aacgtgctag     7920

ctattccaac aggtaacagc tttcacagtc tgcccctggc ctgtctcacc ccatccccca     7980

ccctattcct gccagtgagt ccttcctgtg cttctctccc ttctcccctc ccagccagct     8040

gacttcagtc acccctgtcc cccctcccct gccaataagc tcccccagga ataaaggctt     8100

tgttttgggg atgcttaaat cttgactggc acttcccggc tgtgggggct ggggagccac     8160

ttgtaacatt tctgtgcaga ttttatgtta gccactgcta tgtaaaagca cgttcaaaat     8220

gaatttcagc agattatgtg ttaccataat gaataaacgt cctctatcac catttggagt     8280

ctcccttttc tccaggatct tgatcctggt ccccaaaacc agagtgaatc aaaagagctt     8340

cctcccctga ggcaaagtgg atttgtaagc agttctgaaa catcacttac tcagaagagg     8400

gaacgatgta ttttgatgag tgcaaattgg gaagagctgg aggcctactg cttgggacag     8460

tttttttttt tttttttttt ttaaatatga gtgctagctt attctgtaat tgcggcaact     8520

ttgaaaattg tattttactg gaaatctgcc agccatcacc acccgatttt gattgtatcc     8580

ttcctcccat cctttaatct gttcattgct ttgggggagg tggggcagct ggctcacacg     8640

ttggagtttg ttctttgatg gatgaacgaa cactccagtt ttctttcccg tgaaggttgt     8700

ttcagccaca aaccacttca ttttgctgtt tcaatttcaa aataaaagga aacttatatt     8760

gaaagacaa                                                             8769


<210>  2
<211>  3216
<212>  DNA
<213>  Homo sapiens

<400>  2
ggcagtttcc tggctgaaca cgccagccca atacttaaag agagcaactc ctgactccga       60

tagagactgg atggacccac aagggtgaca gcccaggcgg accgatcttc ccatcccaca      120

tcctccggcg cgatgccaaa aagaggctga cggcaactgg gccttctgca gagaaagacc      180

tccgcttcac tgccccggct ggtcccaagg gtcaggaaga tggattcata cctgctgatg      240

tggggactgc tcacgttcat catggtgcct ggctgccagg cagagctctg tgacgatgac      300

ccgccagaga tcccacacgc cacattcaaa gccatggcct acaaggaagg aaccatgttg      360

aactgtgaat gcaagagagg tttccgcaga ataaaaagcg ggtcactcta tatgctctgt      420

acaggaaact ctagccactc gtcctgggac aaccaatgtc aatgcacaag ctctgccact      480

cggaacacaa cgaaacaagt gacacctcaa cctgaagaac agaaagaaag gaaaaccaca      540

gaaatgcaaa gtccaatgca gccagtggac caagcgagcc ttccaggtca ctgcagggaa      600

cctccaccat gggaaaatga agccacagag agaatttatc atttcgtggt ggggcagatg      660

gtttattatc agtgcgtcca gggatacagg gctctacaca gaggtcctgc tgagagcgtc      720

tgcaaaatga cccacgggaa gacaaggtgg acccagcccc agctcatatg cacaggtgaa      780

atggagacca gtcagtttcc aggtgaagag aagcctcagg caagccccga aggccgtcct      840

gagagtgaga cttcctgcct cgtcacaaca acagattttc aaatacagac agaaatggct      900

gcaaccatgg agacgtccat atttacaaca gagtaccagg tagcagtggc cggctgtgtt      960

ttcctgctga tcagcgtcct cctcctgagt gggctcacct ggcagcggag acagaggaag     1020

agtagaagaa caatctagaa aaccaaaaga acaagaattt cttggtaaga agccgggaac     1080

agacaacaga agtcatgaag cccaagtgaa atcaaaggtg ctaaatggtc gcccaggaga     1140

catccgttgt gcttgcctgc gttttggaag ctctgaagtc acatcacagg acacggggca     1200

gtggcaacct tgtctctatg ccagctcagt cccatcagag agcgagcgct acccacttct     1260

aaatagcaat ttcgccgttg aagaggaagg gcaaaaccac tagaactctc catcttattt     1320

tcatgtatat gtgttcatta aagcatgaat ggtatggaac tctctccacc ctatatgtag     1380

tataaagaaa agtaggttta cattcatctc attccaactt cccagttcag gagtcccaag     1440

gaaagcccca gcactaacgt aaatacacaa cacacacact ctaccctata caactggaca     1500

ttgtctgcgt ggttcctttc tcagccgctt ctgactgctg attctcccgt tcacgttgcc     1560

taataaacat ccttcaagaa ctctgggctg ctacccagaa atcattttac ccttggctca     1620

atcctctaag ctaaccccct tctactgagc cttcagtctt gaatttctaa aaaacagagg     1680

ccatggcaga ataatctttg ggtaacttca aaacggggca gccaaaccca tgaggcaatg     1740

tcaggaacag aaggatgaat gaggtcccag gcagagaatc atacttagca aagttttacc     1800

tgtgcgttac taattggcct ctttaagagt tagtttcttt gggattgcta tgaatgatac     1860

cctgaatttg gcctgcacta atttgatgtt tacaggtgga cacacaaggt gcaaatcaat     1920

gcgtacgttt cctgagaagt gtctaaaaac accaaaaagg gatccgtaca ttcaatgttt     1980

atgcaaggaa ggaaagaaag aaggaagtga agagggagaa gggatggagg tcacactggt     2040

agaacgtaac cacggaaaag agcgcatcag gcctggcacg gtggctcagg cctataaccc     2100

cagctcccta ggagaccaag gcgggagcat ctcttgaggc caggagtttg agaccagcct     2160

gggcagcata gcaagacaca tccctacaaa aaattagaaa ttggctggat gtggtggcat     2220

acgcctgtag tcctagccac tcaggaggct gaggcaggag gattgcttga gcccaggagt     2280

tcgaggctgc agtcagtcat gatggcacca ctgcactcca gcctgggcaa cagagcaaga     2340

tcctgtcttt aaggaaaaaa agacaagatg agcataccag cagtccttga acattatcaa     2400

aaagttcagc atattagaat caccgggagg ccttgttaaa agagttcgct gggcccatct     2460

tcagagtctc tgagttgttg gtctggaata gagccaaatg ttttgtgtgt ctaacaattc     2520

ccaggtgctg ttgctgctgc tactattcca ggaacacact ttgagaacca ttgtgttatt     2580

gctctgcacg cccacccact ctcaactccc acgaaaaaaa tcaacttcca gagctaagat     2640

ttcggtggaa gtcctggttc catatctggt gcaagatctc ccctcacgaa tcagttgagt     2700

caacattcta gctcaacaac atcacacgat taacattaac gaaaattatt catttgggaa     2760

actatcagcc agttttcact tctgaagggg caggagagtg ttatgagaaa tcacggcagt     2820

tttcagcagg gtccagattc agattaaata actattttct gtcatttctg tgaccaacca     2880

catacaaaca gactcatctg tgcactctcc ccctccccct tcaggtatat gttttctgag     2940

taaagttgaa aagaatctca gaccagaaaa tatagatata tatttaaatc ttacttgagt     3000

agaactgatt acgacttttg ggtgttgagg ggtctataag atcaaaactt ttccatgata     3060

atactaagat gttatcgacc atttatctgt ccttctctca aaagtgtatg gtggaatttt     3120

ccagaagcta tgtgatacgt gatgatgtca tcactctgct gttaacatat aataaattta     3180

ttgctattgt ttataaaaga ataaatgata tttttt                               3216


<210>  3
<211>  1048
<212>  DNA
<213>  Homo sapiens

<400>  3
aaggcggggg cgggggcggg gcggcggccg tgggtccctg ccggccggcg gcgggcgcag       60

acagcggcgg gcgcaggacg tgcactatgg ctcggggctc gctgcgccgg ttgctgcggc      120

tcctcgtgct ggggctctgg ctggcgttgc tgcgctccgt ggccggggag caagcgccag      180

gcaccgcccc ctgctcccgc ggcagctcct ggagcgcgga cctggacaag tgcatggact      240

gcgcgtcttg cagggcgcga ccgcacagcg acttctgcct gggctgcgct gcagcacctc      300

ctgccccctt ccggctgctt tggcccatcc ttgggggcgc tctgagcctg accttcgtgc      360

tggggctgct ttctggcttt ttggtctgga gacgatgccg caggagagag aagttcacca      420

cccccataga ggagaccggc ggagagggct gcccagctgt ggcgctgatc cagtgacaat      480

gtgccccctg ccagccgggg ctcgcccact catcattcat tcatccattc tagagccagt      540

ctctgcctcc cagacgcggc gggagccaag ctcctccaac cacaaggggg gtggggggcg      600

gtgaatcacc tctgaggcct gggcccaggg ttcaggggaa ccttccaagg tgtctggttg      660

ccctgcctct ggctccagaa cagaaaggga gcctcacgct ggctcacaca aaacagctga      720

cactgactaa ggaactgcag catttgcaca ggggaggggg gtgccctcct tcctagaggc      780

cctgggggcc aggctgactt ggggggcaga cttgacacta ggccccactc actcagatgt      840

cctgaaattc caccacgggg gtcaccctgg ggggttaggg acctattttt aacactaggg      900

ggctggccca ctaggagggc tggccctaag atacagaccc ccccaactcc ccaaagcggg      960

gaggagatat ttattttggg gagagtttgg aggggaggga gaatttatta ataaaagaat     1020

ctttaacttt aaaaaaaaaa aaaaaaaa                                        1048


