                         SEQUENCE LISTING

<110>  Merial Limited
       Audonnet, Jean-Christophe
       Seetha, Jaganathan
 
<120>  High Resolution Melt Genotyping of IBV, CSFV and NDV

<130>  MER 12-208

<150>  61/738,688
<151>  2012-12-18

<160>  46    

<170>  PatentIn version 3.5

<210>  1
<211>  19
<212>  DNA
<213>  artificial sequence

<220>
<223>  XCE2-a primer

<400>  1
ctctataaac acccttaca                                                    19


<210>  2
<211>  21
<212>  DNA
<213>  artificial sequence

<220>
<223>  XCE2-b primer

<400>  2
cactggtaat ttttcagatg g                                                 21


<210>  3
<211>  19
<212>  DNA
<213>  artificial sequence

<220>
<223>  XCE3 primer

<400>  3
cagattgctt acaaccacc                                                    19


<210>  4
<211>  21
<212>  DNA
<213>  artificial sequence

<220>
<223>  BCE1 primer

<400>  4
agtagttttg tgtataaacc a                                                 21


<210>  5
<211>  21
<212>  DNA
<213>  artificial sequence

<220>
<223>  DCE1 primer

<400>  5
atacaattat atcaaaccag c                                                 21


<210>  6
<211>  21
<212>  DNA
<213>  artificial sequence

<220>
<223>  MCE1 primer

<400>  6
aatactactt ttacgttaca c                                                 21


<210>  7
<211>  180
<212>  DNA
<213>  artificial sequence

<220>
<223>  S1 DNA of IB-QX strain

<400>  7
gttctgcaca agggtgcact gttggtgtta ttaaggatgt ttataatcaa agtgtggctt       60

ccatagctat gacagcacct cttcagggta tggcttggtc taaggcacaa ttctgtagtg      120

cacactgtaa cttttctgaa attacagttt ttgtcacaca ttgttatagt agtggtagtg      180


<210>  8
<211>  22
<212>  DNA
<213>  artificial sequence

<220>
<223>  forward primer for CSFV


<220>
<221>  misc_feature
<222>  (14)..(14)
<223>  r is A or G

<220>
<221>  misc_feature
<222>  (17)..(17)
<223>  Y is C or T

<400>  8
gtagcaagac tggraayagg ta                                                22


<210>  9
<211>  22
<212>  DNA
<213>  artificial sequence

<220>
<223>  reverse primer for CSFV

<400>  9
aaagtgctgt taaaaatgag tg                                                22


<210>  10
<211>  367
<212>  DNA
<213>  artificial sequence

<220>
<223>  DNA of CSFV of LBK

<400>  10
tagcaagact gggaataggt acatacctgg agagggccac accctgcaag gaagacacta       60

tgaagaactg gtgctagcaa gaaagcaggt caacaacttt caagggacag acaggtataa      120

tctaggtcca atagtcaata tggtgctaag gaggctgaga gtcatgatga tgaccttgat      180

tgggagaggg gtatgagcgt ggttaacccg cgatctggac ccgctattag gactctattg      240

tagataacac tatttatttt tatttattta gatattacta tttgtttatt tatttattta      300

ttgaatgagt aagaactggt acaaactacc tcgtgttacc acactacact catttttaac      360

agcactt                                                                367


<210>  11
<211>  367
<212>  DNA
<213>  artificial sequence

<220>
<223>  PCR product of CSFV of VRI

<400>  11
tagcaagact gggaacaggt acaccccggg ggaaggccac accctgcaag gaagacacta       60

tgaagaactg gtgctagcaa gaaagcaggt caacaacttt caagggacag acaggtataa      120

tctaggtcca atagtcaata tggtgctaag gaggctgaga gtcatgatga tgaccttgat      180

tgggagaggg gtatgagcgt ggttaacccg cgatctggac ccgctattag gactctattg      240

tagataacac tatttatttt tatttattta gatattacta tttgtttatt tatttattta      300

ttgaatgagt aagaactggt acaaactacc tcgtgttacc acactacact catttttaac      360

agcactt                                                                367


<210>  12
<211>  379
<212>  DNA
<213>  artificial sequence

<220>
<223>  PCR product of CSFV of Pestiffa

<400>  12
gtagcagggg ggggaaggga gacatacccg gggggggaaa cagcttgcac ggaagacatt       60

atgaagaact ggtgttggca agaaaacaga tcaacaactt tcaagggaca gacaggtaca      120

acctaggccc aatagtcaac atggtgttaa ggaggctgag agtcatgatg atgacgctga      180

tagggagagg ggcatgagcg cgggtaaccc gggatctgaa cccgccagta ggaccctatt      240

gtagataaca ctaatttttt tttttttttt tttttttttt ttagatatta ttatttattt      300

tttttttttt ttttaaaaaa aaaaaaaatt tttttaaact acctcaagtt accacactac      360

actcattttt agggggggg                                                   379


<210>  13
<211>  379
<212>  DNA
<213>  artificial sequence

<220>
<223>  PCR product of CSFV of MVP

<400>  13
tagttagtag aaagacggga aaagggtaca ccccgggagg ggcccacccc ctgcagggga       60

gacattatga agaactggtg ttggcaagaa aacagatcaa aaactttcaa gggacagaca      120

ggtacaatct aggcccaata gtcaacatgg tgttaaggag gctgagagtc atattattgc      180

ccttattggg gaggggggta tgagcgcggg caacccggga tctggacccg ccagtaggac      240

cctattgtag ataacactaa ttttttattt atttagatat tattatttat ttatttattt      300

atttattgaa tgagtaagaa ctggcacaaa ctacctcaag ttaccacacc tccctccttt      360

tttacagccc ttttaatgg                                                   379


<210>  14
<211>  379
<212>  DNA
<213>  artificial sequence

<220>
<223>  PCR product of CSFV of QYHC

<400>  14
tgtagcaaga ctgggaatag gtacataccc ggagagggtc acaccctgca aggaagacat       60

tatgaagaac tggtgttggc aagaaaacag atcaacaact ttcaagggac agacaggtac      120

aacctaggcc caatagtcaa catggtgtta aggaggctga gagtcatgat gatgacgctg      180

atagggagag gggcatgagc gcgggtaacc cgggatctga acccgccagt aggaccctat      240

tgtagataac actaattttc ttttttcttt tttatttatt tagatattat tatttattta      300

tttatttatt tatgaatgag taagaactgg tataaacacc tcaagtcacc acactacact      360

catttttaac agcacttta                                                   379


<210>  15
<211>  379
<212>  DNA
<213>  artificial sequence

<220>
<223>  PCR product of CSFV of ZBC

<400>  15
tgtagcaaga ctgggaatag gtacatcccc ggggaaggtc acaacatgca aggaagacat       60

tatgaagaac tggtgttggc aagaaaacag atcaacaact ttcaagggac agacaggtac      120

aacctaggcc caatagtcaa catggtgtta aggaggctga gagtcatgat gatgacgctg      180

atagggagag gggcatgagc gcgggtaacc cgggatctga acccgccagt aggaccctat      240

tgtagataac actaattttc ttttttcttt tttatttatt tagatattat tatttattta      300

tttatttatt tattgaatga gtaagaactg gtataaacac ctcaagacca cactacactc      360

atttttaaca gcactttaa                                                   379


<210>  16
<211>  379
<212>  DNA
<213>  artificial sequence

<220>
<223>  PCR product of CSFV of YSC

<400>  16
gggggccccc cggaaaagtt aaaccctgca cgagacattc aatgaagaac tggtgttggc       60

aagaaaacag atcaacaact ttcaagggac agacaggtac aacctaggcc caatagtcaa      120

catggtgtta aggaggctga gagtcatgat gatgacgctg atagggagag gggcatgagc      180

gcgggtaacc cgggatctga acccgccagt aggaccctat tgtagacaac actaatcttt      240

tttttttttt tttttttttt tttttttttt tttttttaga tatttttttt tttttttttt      300

tttttttttt aaaaaagcaa aaactggtat aaaccccccc cccccccccc cccccttttt      360

tttttaaaaa aactttagc                                                   379


<210>  17
<211>  20
<212>  DNA
<213>  artificial sequence

<220>
<223>  forward primer 1 for NDV

<400>  17
atgggcycca gaycttctac                                                   20


<210>  18
<211>  25
<212>  DNA
<213>  artificial sequence

<220>
<223>  reverse primer 1 for NDV

<400>  18
ctgccactgc tagttgtgat aatcc                                             25


<210>  19
<211>  534
<212>  DNA
<213>  artificial sequence

<220>
<223>  DNA of NDV strain clone30

<400>  19
ataagctgcg tctctgagat tgcgctccgc ccactcaccc agatcatcat gacacaaaaa       60

actaacctgt cttgattatt tacagttagt ttacctgtct atcaagttag aaaaaacacg      120

ggtagaagat tctggatccc ggttggcgcc ctccaggtgc aagatgggct ccagaccttc      180

taccaagaac ccagcaccta tgatgctgac tatccgggtt gcgctggtac tgagttgcat      240

ctgtccggca aactccattg atggcaggcc tcttgcagct gcaggaattg tggttacagg      300

agacaaagcc gtcaacatat acacctcatc ccagacagga tcaatcatag ttaagctcct      360

cccgaatctg cccaaggata aggaggcatg tgcgaaagcc cccttggatg catacaacag      420

gacattgacc actttgctca ccccccttgg tgactctatc cgtaggatac aagagtctgt      480

gactacatct ggagggggga gacaggggcg ccttataggc gccattattg gcgg            534


<210>  20
<211>  534
<212>  DNA
<213>  artificial sequence

<220>
<223>  DNA of NDV strain Mukteswar

<400>  20
ataggccgta tccctgagac tgcaattcac ccgccttccc aaaacaccat gacaccagat       60

aatgatctgt cttgattact tacagttagt ttccctgtct atcaaattag aaaaaacacg      120

ggtagaagag ttcggatccc ggccggcgca ccaaaagcgc aagatgggcc ccagatcttc      180

taccaggatc ccagtacctc taatgctgac catacggatc acgctggcac tgagttatgt      240

ccgtctgaca agttctcttg atggcaggcc tcttgcagcc gcagggatcg tggtaacagg      300

ggataaagca gttaacatat acacctcatc ccagacaggg tcaatcatag tcaagttact      360

cccaaatatg cccaaggaca aagaggcatg tgcaaaagcc ccattggagg cttacaacag      420

gacactgact actttgctta ccccccttgg tgattctatc cgcaggatac aagagtctgt      480

gactacatcc ggaggaagga gacagagacg ctttataggt gccattattg gcag            534


<210>  21
<211>  534
<212>  DNA
<213>  artificial sequence

<220>
<223>  DNA of NDV strain B1

<400>  21
ataagctgcg tctctgagat tgcgctccgc ccactcaccc agatcatcat gacacaaaaa       60

actaatctgt cttgattatt tacagttagt ttacctgtcc atcaagttag aaaaaacacg      120

ggtagaagac tctggatccc ggttggcgcc ctccaggtgc aggatgggct ccagaccttt      180

taccaagaac ccagcaccta tgatgctgac tatccgggtc gcgctggtat tgagttgcat      240

ctgtccggca aactccattg atggcaggcc ttttgcagct gcaggaattg tggttacagg      300

agacaaagca gtcaacatat acacctcatc ccagacagga tcaatcatag ttaagctcct      360

cccgaatctg cccaaggata aggaggcatg tgcgaaagcc cccttggatg catacaacag      420

gacattgacc actttgctca ccccccttgg tgactctatc cgtaggatac aagagtctgt      480

gactacatct ggagggggga gacaggggcg ccttataggc gccattattg gcgg            534


<210>  22
<211>  534
<212>  DNA
<213>  artificial sequence

<220>
<223>  DNA of NDV strain VG/GA

<400>  22
ataagctgcg tctctgagat tgcgctccgc ccactcaccc agatcatcat gacacaaaaa       60

actaatctgt cttgattatt tacagttagt ttacctgtcc atcaagttag aaaaaacacg      120

ggtagaagat tctggatccc ggttggcgcc ctccaggtgc aggatgggct ccagaccttc      180

taccaagaac ccagcaccta tgatgctgac tatccgggtc gcgctggtac tgagttgcat      240

ctgtccggca aactccattg atggcaggcc tcttgcagct gcaggaattg tggttacagg      300

agacaaagca gtcaacatat acacctcatc ccagacagga tcaatcatag ttaagctcct      360

cccgaatctg cccaaggata aggaggcatg tgcgaaagcc cccttggatg catataacag      420

gacattgacc actttgctca ccccccttgg tgactctatc cgtagaatac aagagtctat      480

gactacatct ggagggggga gacaggggcg ccttataggc gccattattg gcgg            534


<210>  23
<211>  540
<212>  DNA
<213>  artificial sequence

<220>
<223>  DNA of NDV strain KBNP-C4152R2L

<400>  23
ataagctgcg tctctgagat tgcgctccgc ccactcaccc agatcatcat gacacaaaaa       60

actaatctgt cttgattatt tacagttagt ttacctgtct atcaagttag aaaaaacacg      120

cgtacgggta gaagagtctg gatcccgacc ggcacattca ggacgcaata tgggctccaa      180

actttctacc aggattccag cacctctgat gctgaccacc cggattacgc tgatattgag      240

ctgtatccgt ccgacaagct ctcttgacgg caggcctctt gcagctgcag gaattgtagt      300

aacaggagat aaggcagtca atgtatacac ctcgtctcag acagggtcaa tcatagtcaa      360

gttgctcccg aatatgccca gggataaaga ggcgtgtgca aaagccccat tagaggcata      420

taacagaaca ctgactactt tgctaactcc tcttggcgac tccatccgca agatccaagg      480

gtctgtgtcc acgtctggag gaggcagaca agcacgcctg ataggtgctg ttattggcag      540


<210>  24
<211>  553
<212>  PRT
<213>  artificial sequence

<220>
<223>  protein of NDV strain clone30

<400>  24

Met Gly Ser Arg Pro Ser Thr Lys Asn Pro Ala Pro Met Met Leu Thr 
1               5                   10                  15      


Ile Arg Val Ala Leu Val Leu Ser Cys Ile Cys Pro Ala Asn Ser Ile 
            20                  25                  30          


Asp Gly Arg Pro Leu Ala Ala Ala Gly Ile Val Val Thr Gly Asp Lys 
        35                  40                  45              


Ala Val Asn Ile Tyr Thr Ser Ser Gln Thr Gly Ser Ile Ile Val Lys 
    50                  55                  60                  


Leu Leu Pro Asn Leu Pro Lys Asp Lys Glu Ala Cys Ala Lys Ala Pro 
65                  70                  75                  80  


Leu Asp Ala Tyr Asn Arg Thr Leu Thr Thr Leu Leu Thr Pro Leu Gly 
                85                  90                  95      


Asp Ser Ile Arg Arg Ile Gln Glu Ser Val Thr Thr Ser Gly Gly Gly 
            100                 105                 110         


Arg Gln Gly Arg Leu Ile Gly Ala Ile Ile Gly Gly Val Ala Leu Gly 
        115                 120                 125             


Val Ala Thr Ala Ala Gln Ile Thr Ala Ala Ala Ala Leu Ile Gln Ala 
    130                 135                 140                 


Lys Gln Asn Ala Ala Asn Ile Leu Arg Leu Lys Glu Ser Ile Ala Ala 
145                 150                 155                 160 


Thr Asn Glu Ala Val His Glu Val Thr Asp Gly Leu Ser Gln Leu Ala 
                165                 170                 175     


Val Ala Val Gly Lys Met Gln Gln Phe Val Asn Asp Gln Phe Asn Lys 
            180                 185                 190         


Thr Ala Gln Glu Leu Asp Cys Ile Lys Ile Ala Gln Gln Val Gly Val 
        195                 200                 205             


Glu Leu Asn Leu Tyr Leu Thr Glu Leu Thr Thr Val Phe Gly Pro Gln 
    210                 215                 220                 


Ile Thr Ser Pro Ala Leu Asn Lys Leu Thr Ile Gln Ala Leu Tyr Asn 
225                 230                 235                 240 


Leu Ala Gly Gly Asn Met Asp Tyr Leu Leu Thr Lys Leu Gly Val Gly 
                245                 250                 255     


Asn Asn Gln Leu Ser Ser Leu Ile Gly Ser Gly Leu Ile Thr Gly Asn 
            260                 265                 270         


Pro Ile Leu Tyr Asp Ser Gln Thr Gln Leu Leu Gly Ile Gln Val Thr 
        275                 280                 285             


Leu Pro Ser Val Gly Asn Leu Asn Asn Met Arg Ala Thr Tyr Leu Glu 
    290                 295                 300                 


Thr Leu Ser Val Ser Thr Thr Lys Gly Phe Ala Ser Ala Leu Val Pro 
305                 310                 315                 320 


Lys Val Val Thr Gln Val Gly Ser Val Ile Glu Glu Leu Asp Thr Ser 
                325                 330                 335     


Tyr Cys Ile Glu Thr Asp Leu Asp Leu Tyr Cys Thr Arg Ile Val Thr 
            340                 345                 350         


Phe Pro Met Ser Pro Gly Ile Tyr Ser Cys Leu Ser Gly Asn Thr Ser 
        355                 360                 365             


Ala Cys Met Tyr Ser Lys Thr Glu Gly Ala Leu Thr Thr Pro Tyr Met 
    370                 375                 380                 


Thr Ile Lys Gly Ser Val Ile Ala Asn Cys Lys Met Thr Thr Cys Arg 
385                 390                 395                 400 


Cys Val Asn Pro Pro Gly Ile Ile Ser Gln Asn Tyr Gly Glu Ala Val 
                405                 410                 415     


Ser Leu Ile Asp Lys Gln Ser Cys Asn Val Leu Ser Leu Gly Gly Ile 
            420                 425                 430         


Thr Leu Arg Leu Ser Gly Glu Phe Asp Val Thr Tyr Gln Lys Asn Ile 
        435                 440                 445             


Ser Ile Gln Asp Ser Gln Val Ile Ile Thr Gly Asn Leu Asp Ile Ser 
    450                 455                 460                 


Thr Glu Leu Gly Asn Val Asn Asn Ser Ile Ser Asn Ala Leu Asn Lys 
465                 470                 475                 480 


Leu Glu Glu Ser Asn Arg Lys Leu Asp Lys Val Asn Val Lys Leu Thr 
                485                 490                 495     


Ser Thr Ser Ala Leu Ile Thr Tyr Ile Val Leu Thr Ile Ile Ser Leu 
            500                 505                 510         


Val Phe Gly Ile Leu Ser Leu Ile Leu Ala Cys Tyr Leu Met Tyr Lys 
        515                 520                 525             


Gln Lys Ala Gln Gln Lys Thr Leu Leu Trp Leu Gly Asn Asn Thr Leu 
    530                 535                 540                 


Asp Gln Met Arg Ala Thr Thr Lys Met 
545                 550             


<210>  25
<211>  553
<212>  PRT
<213>  artificial sequence

<220>
<223>  protein of NDV strain Mukteswar

<400>  25

Met Gly Pro Arg Ser Ser Thr Arg Ile Pro Val Pro Leu Met Leu Thr 
1               5                   10                  15      


Ile Arg Ile Thr Leu Ala Leu Ser Tyr Val Arg Leu Thr Ser Ser Leu 
            20                  25                  30          


Asp Gly Arg Pro Leu Ala Ala Ala Gly Ile Val Val Thr Gly Asp Lys 
        35                  40                  45              


Ala Val Asn Ile Tyr Thr Ser Ser Gln Thr Gly Ser Ile Ile Val Lys 
    50                  55                  60                  


Leu Leu Pro Asn Met Pro Lys Asp Lys Glu Ala Cys Ala Lys Ala Pro 
65                  70                  75                  80  


Leu Glu Ala Tyr Asn Arg Thr Leu Thr Thr Leu Leu Thr Pro Leu Gly 
                85                  90                  95      


Asp Ser Ile Arg Arg Ile Gln Glu Ser Val Thr Thr Ser Gly Gly Arg 
            100                 105                 110         


Arg Gln Arg Arg Phe Ile Gly Ala Ile Ile Gly Ser Val Ala Leu Gly 
        115                 120                 125             


Val Ala Thr Ala Ala Gln Ile Thr Ala Ala Ser Ala Leu Ile Gln Ala 
    130                 135                 140                 


Asn Gln Asn Ala Ala Asn Ile Leu Arg Leu Lys Glu Ser Ile Ala Ala 
145                 150                 155                 160 


Thr Asn Glu Ala Val His Glu Val Thr Gly Gly Leu Ser Gln Leu Ala 
                165                 170                 175     


Val Ala Val Gly Lys Met Gln Gln Phe Val Asn Asp Gln Phe Asn Asn 
            180                 185                 190         


Thr Ala Gln Glu Leu Asp Cys Ile Lys Ile Thr Gln Gln Val Gly Val 
        195                 200                 205             


Glu Leu Asn Leu Tyr Leu Thr Glu Leu Thr Thr Val Phe Gly Pro Gln 
    210                 215                 220                 


Ile Thr Ser Pro Ala Leu Thr Gln Leu Thr Val Gln Ala Leu Tyr Asn 
225                 230                 235                 240 


Leu Ala Gly Gly Asn Val Asp Tyr Leu Leu Thr Lys Leu Gly Val Gly 
                245                 250                 255     


Asn Asn Gln Leu Ser Ser Leu Ile Gly Ser Gly Leu Ile Thr Gly Asn 
            260                 265                 270         


Pro Ile Phe Tyr Asp Ser Gln Thr Gln Leu Leu Gly Ile Gln Val Thr 
        275                 280                 285             


Leu Pro Ser Val Gly Asn Leu Asn Asn Met Arg Ala Thr Tyr Leu Glu 
    290                 295                 300                 


Thr Leu Ser Val Ser Thr Thr Lys Gly Phe Ala Ser Ala Leu Val Pro 
305                 310                 315                 320 


Lys Val Ala Thr Gln Val Gly Ser Val Ile Glu Glu Leu Asp Thr Ser 
                325                 330                 335     


Tyr Cys Ile Glu Ala Asp Leu Asp Leu Tyr Cys Thr Arg Ile Val Thr 
            340                 345                 350         


Phe Pro Met Ser Pro Gly Ile Tyr Ser Cys Leu Ser Gly Asn Thr Ser 
        355                 360                 365             


Ala Cys Met Tyr Ser Lys Thr Glu Gly Ala Leu Thr Thr Pro Tyr Met 
    370                 375                 380                 


Thr Leu Lys Gly Ser Val Val Ala Asn Cys Gln Met Thr Thr Cys Arg 
385                 390                 395                 400 


Cys Ala Asp Pro Pro Gly Ile Ile Ser Gln Asn Tyr Gly Glu Ala Val 
                405                 410                 415     


Ser Leu Ile Asp Lys His Ser Cys Asn Val Val Ser Leu Asp Gly Ile 
            420                 425                 430         


Thr Leu Arg Leu Ser Gly Glu Phe Asp Ala Thr Tyr Gln Lys Asn Ile 
        435                 440                 445             


Ser Ile Leu Asp Ser Gln Val Leu Val Thr Gly Asn Leu Asp Ile Ser 
    450                 455                 460                 


Thr Glu Leu Gly Asn Val Asn His Ser Ile Ser Asn Ala Leu Asp Lys 
465                 470                 475                 480 


Leu Glu Glu Ser Asn Ser Lys Leu Asp Glu Val Asn Val Arg Leu Thr 
                485                 490                 495     


Ser Thr Ser Ala Leu Ile Thr Tyr Ile Val Leu Thr Val Ile Ser Leu 
            500                 505                 510         


Val Leu Gly Met Leu Ser Leu Val Leu Ala Cys Tyr Leu Met Tyr Lys 
        515                 520                 525             


Gln Lys Ala Gln Arg Lys Thr Leu Leu Trp Leu Gly Asn Asn Thr Leu 
    530                 535                 540                 


Asp Gln Met Arg Ala Thr Thr Lys Met 
545                 550             


<210>  26
<211>  553
<212>  PRT
<213>  artificial sequence

<220>
<223>  protein of NDV strain B1

<400>  26

Met Gly Ser Arg Pro Phe Thr Lys Asn Pro Ala Pro Met Met Leu Thr 
1               5                   10                  15      


Ile Arg Val Ala Leu Val Leu Ser Cys Ile Cys Pro Ala Asn Ser Ile 
            20                  25                  30          


Asp Gly Arg Pro Phe Ala Ala Ala Gly Ile Val Val Thr Gly Asp Lys 
        35                  40                  45              


Ala Val Asn Ile Tyr Thr Ser Ser Gln Thr Gly Ser Ile Ile Val Lys 
    50                  55                  60                  


Leu Leu Pro Asn Leu Pro Lys Asp Lys Glu Ala Cys Ala Lys Ala Pro 
65                  70                  75                  80  


Leu Asp Ala Tyr Asn Arg Thr Leu Thr Thr Leu Leu Thr Pro Leu Gly 
                85                  90                  95      


Asp Ser Ile Arg Arg Ile Gln Glu Ser Val Thr Thr Ser Gly Gly Gly 
            100                 105                 110         


Arg Gln Gly Arg Leu Ile Gly Ala Ile Ile Gly Gly Val Ala Leu Gly 
        115                 120                 125             


Val Ala Thr Ala Ala Gln Ile Thr Ala Ala Ala Ala Leu Ile Gln Ala 
    130                 135                 140                 


Lys Gln Asn Ala Ala Asn Ile Leu Arg Leu Lys Glu Ser Ile Ala Ala 
145                 150                 155                 160 


Thr Asn Glu Ala Val His Glu Val Thr Asp Gly Leu Ser Gln Leu Ala 
                165                 170                 175     


Val Ala Val Gly Lys Met Gln Gln Phe Val Asn Asp Gln Phe Asn Lys 
            180                 185                 190         


Thr Ala Gln Glu Leu Asp Cys Ile Lys Ile Ala Gln Gln Val Gly Val 
        195                 200                 205             


Glu Leu Asn Leu Tyr Leu Thr Glu Leu Thr Thr Val Phe Gly Pro Gln 
    210                 215                 220                 


Ile Thr Ser Pro Ala Leu Asn Lys Leu Thr Ile Gln Ala Leu Tyr Asn 
225                 230                 235                 240 


Leu Ala Gly Gly Asn Met Asp Tyr Leu Leu Thr Lys Leu Gly Ile Gly 
                245                 250                 255     


Asn Asn Gln Leu Ser Ser Leu Ile Gly Ser Gly Leu Ile Thr Gly Asn 
            260                 265                 270         


Pro Ile Leu Tyr Asp Ser Gln Thr Gln Leu Leu Gly Ile Gln Val Thr 
        275                 280                 285             


Leu Pro Ser Val Gly Asn Leu Asn Asn Met Arg Ala Thr Tyr Leu Glu 
    290                 295                 300                 


Thr Leu Ser Val Ser Thr Thr Arg Gly Phe Ala Ser Ala Leu Val Pro 
305                 310                 315                 320 


Lys Val Val Thr Gln Val Gly Ser Val Ile Glu Glu Leu Asp Thr Ser 
                325                 330                 335     


Tyr Cys Ile Glu Thr Asp Leu Asp Leu Tyr Cys Thr Arg Ile Val Thr 
            340                 345                 350         


Phe Pro Met Ser Pro Gly Ile Tyr Ser Cys Leu Ser Gly Asn Thr Ser 
        355                 360                 365             


Ala Cys Met Tyr Ser Lys Thr Glu Gly Ala Leu Thr Thr Pro Tyr Met 
    370                 375                 380                 


Thr Ile Lys Gly Ser Val Ile Ala Asn Cys Lys Met Thr Thr Cys Arg 
385                 390                 395                 400 


Cys Val Asn Pro Pro Gly Ile Ile Ser Gln Asn Tyr Gly Glu Ala Val 
                405                 410                 415     


Ser Leu Ile Asp Lys Gln Ser Cys Asn Val Leu Ser Leu Gly Gly Ile 
            420                 425                 430         


Thr Leu Arg Leu Ser Gly Glu Phe Asp Val Thr Tyr Gln Lys Asn Ile 
        435                 440                 445             


Ser Ile Gln Asp Ser Gln Val Ile Ile Thr Gly Asn Leu Asp Ile Ser 
    450                 455                 460                 


Thr Glu Leu Gly Asn Val Asn Asn Ser Ile Ser Asn Ala Leu Asn Lys 
465                 470                 475                 480 


Leu Glu Glu Ser Asn Arg Lys Leu Asp Lys Val Asn Val Lys Leu Thr 
                485                 490                 495     


Ser Thr Ser Ala Leu Ile Thr Tyr Ile Val Leu Thr Ile Ile Ser Leu 
            500                 505                 510         


Val Phe Gly Ile Leu Ser Leu Ile Leu Ala Cys Tyr Leu Met Tyr Lys 
        515                 520                 525             


Gln Lys Ala Gln Gln Lys Thr Leu Leu Trp Leu Gly Asn Asn Thr Leu 
    530                 535                 540                 


Asp Gln Met Arg Ala Thr Thr Lys Met 
545                 550             


<210>  27
<211>  553
<212>  PRT
<213>  artificial sequence

<220>
<223>  protein of NDV strain VG/GA

<400>  27

Met Gly Ser Arg Pro Ser Thr Lys Asn Pro Ala Pro Met Met Leu Thr 
1               5                   10                  15      


Ile Arg Val Ala Leu Val Leu Ser Cys Ile Cys Pro Ala Asn Ser Ile 
            20                  25                  30          


Asp Gly Arg Pro Leu Ala Ala Ala Gly Ile Val Val Thr Gly Asp Lys 
        35                  40                  45              


Ala Val Asn Ile Tyr Thr Ser Ser Gln Thr Gly Ser Ile Ile Val Lys 
    50                  55                  60                  


Leu Leu Pro Asn Leu Pro Lys Asp Lys Glu Ala Cys Ala Lys Ala Pro 
65                  70                  75                  80  


Leu Asp Ala Tyr Asn Arg Thr Leu Thr Thr Leu Leu Thr Pro Leu Gly 
                85                  90                  95      


Asp Ser Ile Arg Arg Ile Gln Glu Ser Met Thr Thr Ser Gly Gly Gly 
            100                 105                 110         


Arg Gln Gly Arg Leu Ile Gly Ala Ile Ile Gly Gly Val Ala Leu Gly 
        115                 120                 125             


Val Ala Thr Ala Ala Gln Met Ala Ala Ala Ala Ala Leu Ile Gln Ala 
    130                 135                 140                 


Lys Gln Asn Ala Ala Asn Ile Leu Arg Leu Lys Glu Ser Ile Ala Ala 
145                 150                 155                 160 


Thr Asn Glu Ala Val His Glu Val Thr Asp Gly Leu Ser Gln Leu Ala 
                165                 170                 175     


Val Ala Val Gly Lys Met Gln Gln Phe Val Asn Asp Gln Phe Asn Lys 
            180                 185                 190         


Thr Ala Gln Glu Leu Asp Cys Ile Lys Ile Ala Gln Gln Val Gly Val 
        195                 200                 205             


Glu Leu Asn Leu Tyr Leu Thr Glu Leu Thr Thr Val Phe Gly Pro Gln 
    210                 215                 220                 


Ile Thr Ser Pro Ala Leu Asn Lys Leu Thr Ile Gln Ala Leu Tyr Asn 
225                 230                 235                 240 


Leu Ala Gly Gly Asn Met Asp Tyr Leu Leu Thr Lys Leu Gly Ile Gly 
                245                 250                 255     


Asn Asn Gln Leu Ser Ser Leu Ile Gly Ser Gly Leu Ile Thr Gly Asn 
            260                 265                 270         


Pro Ile Leu Tyr Asp Ser Gln Thr Gln Leu Leu Gly Ile Gln Val Thr 
        275                 280                 285             


Leu Pro Ser Val Gly Asn Leu Asn Asn Met Arg Ala Thr Tyr Leu Glu 
    290                 295                 300                 


Thr Leu Ser Val Ser Thr Thr Arg Gly Phe Ala Ser Ala Leu Val Pro 
305                 310                 315                 320 


Lys Val Val Thr Gln Val Gly Ser Val Ile Glu Glu Leu Asp Thr Ser 
                325                 330                 335     


Tyr Cys Ile Glu Thr Asp Leu Asp Leu Tyr Cys Thr Arg Ile Val Thr 
            340                 345                 350         


Phe Pro Met Ser Pro Gly Ile Tyr Ser Cys Leu Ser Gly Asn Thr Ser 
        355                 360                 365             


Ala Cys Met Tyr Ser Lys Thr Glu Gly Ala Leu Thr Thr Pro Tyr Met 
    370                 375                 380                 


Thr Ile Lys Gly Ser Val Ile Ala Asn Cys Lys Met Thr Thr Cys Arg 
385                 390                 395                 400 


Cys Val Asn Pro Pro Gly Ile Ile Ser Gln Asn Tyr Gly Glu Ala Val 
                405                 410                 415     


Ser Leu Ile Asp Lys Gln Ser Cys Asn Val Leu Ser Leu Gly Gly Ile 
            420                 425                 430         


Thr Leu Arg Leu Ser Gly Glu Phe Asp Val Thr Tyr Gln Lys Asn Ile 
        435                 440                 445             


Ser Ile Gln Asp Ser Gln Val Ile Ile Thr Gly Asn Leu Asp Ile Ser 
    450                 455                 460                 


Thr Glu Leu Gly Asn Val Asn Asn Ser Ile Ser Asn Ala Leu Asn Lys 
465                 470                 475                 480 


Leu Glu Glu Ser Asn Arg Lys Leu Asp Lys Val Asn Val Lys Leu Thr 
                485                 490                 495     


Ser Thr Ser Ala Leu Ile Thr Tyr Ile Val Leu Thr Ile Ile Ser Leu 
            500                 505                 510         


Val Phe Gly Ile Leu Ser Leu Ile Leu Ala Cys Tyr Leu Met Tyr Lys 
        515                 520                 525             


Gln Lys Ala Gln Gln Lys Thr Leu Leu Trp Leu Gly Asn Asn Thr Leu 
    530                 535                 540                 


Asp Gln Met Arg Ala Thr Thr Lys Met 
545                 550             


<210>  28
<211>  553
<212>  PRT
<213>  artificial sequence

<220>
<223>  protein of NDV strain KBNP

<400>  28

Met Gly Ser Lys Leu Ser Thr Arg Ile Pro Ala Pro Leu Met Leu Thr 
1               5                   10                  15      


Thr Arg Ile Thr Leu Ile Leu Ser Cys Ile Arg Pro Thr Ser Ser Leu 
            20                  25                  30          


Asp Gly Arg Pro Leu Ala Ala Ala Gly Ile Val Val Thr Gly Asp Lys 
        35                  40                  45              


Ala Val Asn Val Tyr Thr Ser Ser Gln Thr Gly Ser Ile Ile Val Lys 
    50                  55                  60                  


Leu Leu Pro Asn Met Pro Arg Asp Lys Glu Ala Cys Ala Lys Ala Pro 
65                  70                  75                  80  


Leu Glu Ala Tyr Asn Arg Thr Leu Thr Thr Leu Leu Thr Pro Leu Gly 
                85                  90                  95      


Asp Ser Ile Arg Lys Ile Gln Gly Ser Val Ser Thr Ser Gly Gly Gly 
            100                 105                 110         


Arg Gln Ala Arg Leu Ile Gly Ala Val Ile Gly Ser Val Ala Leu Gly 
        115                 120                 125             


Val Ala Thr Ala Ala Gln Ile Thr Ala Ala Ala Ala Leu Ile Gln Ala 
    130                 135                 140                 


Asn Gln Asn Ala Ala Asn Ile Leu Arg Leu Lys Glu Ser Ile Ala Ala 
145                 150                 155                 160 


Thr Asn Glu Ala Val His Glu Val Thr Asp Gly Leu Ser Gln Leu Ser 
                165                 170                 175     


Val Ala Val Gly Lys Met Gln Gln Phe Val Asn Asp Gln Phe Asn Asn 
            180                 185                 190         


Thr Ala Arg Glu Leu Asp Cys Ile Lys Ile Thr Gln Gln Val Gly Val 
        195                 200                 205             


Glu Leu Asn Leu Tyr Leu Thr Glu Leu Thr Thr Val Phe Gly Pro Gln 
    210                 215                 220                 


Ile Thr Ser Pro Ala Leu Thr Gln Leu Thr Ile Gln Ala Leu Tyr Asn 
225                 230                 235                 240 


Leu Ala Gly Gly Asn Met Asn Tyr Leu Leu Thr Lys Leu Gly Ile Gly 
                245                 250                 255     


Asn Asn Gln Leu Ser Ser Leu Ile Gly Ser Gly Leu Ile Thr Gly Tyr 
            260                 265                 270         


Pro Ile Leu Tyr Asp Ser Gln Thr Gln Leu Leu Gly Ile Gln Val Asn 
        275                 280                 285             


Leu Pro Ser Val Gly Asn Leu Asn Asn Met Arg Ala Thr Tyr Leu Glu 
    290                 295                 300                 


Thr Leu Ser Val Ser Thr Thr Lys Gly Tyr Ala Ser Ala Leu Val Pro 
305                 310                 315                 320 


Lys Val Val Thr Gln Val Gly Ser Val Ile Glu Glu Leu Asp Thr Ser 
                325                 330                 335     


Tyr Cys Ile Glu Ser Asp Leu Asp Leu Tyr Cys Thr Arg Ile Val Thr 
            340                 345                 350         


Phe Pro Met Ser Pro Gly Ile Tyr Ser Cys Leu Ser Gly Asn Thr Ser 
        355                 360                 365             


Ala Cys Met Tyr Ser Lys Thr Glu Gly Ala Leu Thr Thr Pro Tyr Met 
    370                 375                 380                 


Ala Leu Lys Gly Ser Val Ile Ala Asn Cys Lys Ile Thr Thr Cys Arg 
385                 390                 395                 400 


Cys Thr Asp Pro Pro Gly Ile Ile Ser Gln Asn Tyr Gly Glu Ala Val 
                405                 410                 415     


Ser Leu Ile Asp Arg His Ser Cys Asn Val Leu Ser Leu Asp Gly Ile 
            420                 425                 430         


Thr Leu Arg Leu Ser Gly Glu Phe Asp Ala Thr Tyr Gln Lys Asn Ile 
        435                 440                 445             


Ser Ile Leu Asp Ser Gln Val Ile Val Thr Gly Asn Leu Asp Ile Ser 
    450                 455                 460                 


Thr Glu Leu Gly Asn Val Asn Asn Ser Ile Ser Asn Ala Leu Asp Ser 
465                 470                 475                 480 


Leu Ala Glu Ser Asn Ser Lys Leu Glu Lys Ile Asn Val Arg Leu Thr 
                485                 490                 495     


Ser Thr Ser Ala Leu Ile Thr Tyr Ile Val Leu Thr Val Ile Ser Leu 
            500                 505                 510         


Val Phe Gly Ala Phe Ser Leu Gly Leu Ala Cys Tyr Leu Met Tyr Lys 
        515                 520                 525             


Gln Lys Ala Gln Gln Lys Thr Leu Leu Trp Leu Gly Asn Asn Thr Leu 
    530                 535                 540                 


Asp Gln Met Arg Ala Thr Thr Arg Ala 
545                 550             


<210>  29
<211>  16
<212>  DNA
<213>  artificial sequence

<220>
<223>  forward primer for IB-QX for IBV

<400>  29
cttatgcagt agtcaa                                                       16


<210>  30
<211>  22
<212>  DNA
<213>  artificial sequence

<220>
<223>  reverse primer for IB-QX for IBV

<400>  30
cacgtggaat catgcctgtt at                                                22


<210>  31
<211>  25
<212>  DNA
<213>  artificial sequence

<220>
<223>  forward primer 2 for NDV


<220>
<221>  misc_feature
<222>  (17)..(17)
<223>  N is inosine

<400>  31
ctgccactgc tagttgngat aatcc                                             25


<210>  32
<211>  22
<212>  DNA
<213>  artificial sequence

<220>
<223>  reverse primer 2 for NDV


<220>
<221>  misc_feature
<222>  (10)..(10)
<223>  N is inosine

<220>
<221>  misc_feature
<222>  (19)..(19)
<223>  N is inosine

<400>  32
ccttggtgan tctatccgna gg                                                22


<210>  33
<211>  6
<212>  PRT
<213>  artificial sequence

<220>
<223>  F fusion of NDV clearage site motif 1

<400>  33

Arg Arg Arg Lys Arg Phe 
1               5       


<210>  34
<211>  6
<212>  PRT
<213>  artificial sequence

<220>
<223>  F fusion of NDV cleavage site motif 2

<400>  34

Gly Arg Gln Gly Arg Leu 
1               5       


<210>  35
<211>  6
<212>  PRT
<213>  artificial sequence

<220>
<223>  F fusion of NDV clearage site motif 3

<400>  35

Gly Lys Gln Gly Arg Leu 
1               5       


<210>  36
<211>  1611
<212>  DNA
<213>  artificial sequence

<220>
<223>  DNA of M5365

<400>  36
atgttggtga agtcactgtt cttagtgact ctttcgtttg cactatgtag tgctaatttg       60

tataataatg atagttatgt ttactactac cagagtgcat ttagaccccc taatggttgg      120

catttacaag gaggtgctta tgcaatagtt aacagttctt catattataa taacgcaggt      180

ggttcctctg aatgcactgc tggtattatt aaggatgttt ataatcttag cgcagcttct      240

atatctatga cagcaccacc tacgggtatg tcatggtctg tttcacaatt ttgtacagca      300

cactgtaact tctctgactt tacagtgttt gtcacacatt gttttaaaag tggtcgcgga      360

cagtgtcctt taacaggcct aataccacag aattacattc gcatctctgc tatgagaaat      420

ggttctctct tttataattt aacagttagt gcgtctaaat accctaattt taaatctttt      480

caatgtgtta ataatgccac atctgtgtat ttaaatggtg accttgtttt ctcttctaac      540

atgactactg atgttacagc agcgggtgtg tattttaaag caggtggacc tgttacttac      600

agtgttatga agcagtttca ggtcttagct tattttgtta atggcactgt acaagaagtt      660

attttgtgcg atgacacacc tagaggtttg ctagcatgtc aatataatac tggcaatttt      720

tcagaaggct tctacctttt tactaattat agtttagtta aggaaaagtt attgtttatc      780

cgaaggagtg taaatcactc gggcgttaac caattcactt ttactaatgt aagtaaagcc      840

cagcctaata gggggggtgt tcaacttttc catttatatc aaacgcaacc agctcagagg      900

ggtaatataa ttttaattgg ccatttctca gtcagtctgt gtataaagca agtgatttta      960

tgtatgggtc ttatcccccc tagttgttct tttagaccag aaaccattac cagtggtttg     1020

tggtttaatt ccttgtcagt ttctcttact tatggacccc tacagggagg gtgcaagcaa     1080

tctgtcttca gtagtaaggc aacgtgttgt tatgcctact cttataatgg cccaagggca     1140

tgtaaaggtg tttattcagg tgaattaagt acgagttttg aatgtggatt gctggtttat     1200

gttactaaga gtgatggctc tcgtatacag actagaacgg agcccttagt attaacgcaa     1260

ctcaattata ataatattac tttagataag tgtgttgcct ataatatata tggcagagta     1320

ggccaaggtt ttattactaa tgtgactgat tctgctgcta attttagtta tttagcagat     1380

ggtgggttag ctattttaga tacttcgggc gccatagatg tttttgttgt acagggcagc     1440

tatggtctta attattacaa ggttaatcct tgtgaagatg ttaaccaaca gtttgtagtg     1500

tctggtggca atatagttgg tattcttact tctagaaatg aaacaggttc tgaacaggtt     1560

gagaaccagt tttatgttaa gttaaccaat agctcacatc gtcgcaggcg t              1611


<210>  37
<211>  1593
<212>  DNA
<213>  artificial sequence

<220>
<223>  DNA of V9/04

<400>  37
atgttggtga agtcactgtt cttagtgact cttttgtttg cactatgtag tgctaatttg       60

tataataatg atagttatgt ttactactac cagagtgcat tgagaccccc taatggctgg      120

cacttacaag gaggcgctta tgcagtagtt aacagttctg tacgttataa taatgcaggt      180

tcattatcag catgcactgt tggtattatt aaggatgtgt ttaattctac agcggcttct      240

atttctatga tagcaccgca attaggtatg tcgtggtcca aggcacaaat ttgtacggca      300

cactgtaatt tctcggatgt tacagttttt gtcacacatt gttatagtag tggtagtggg      360

tcttgtccta taacaggcat gattccacag aatcatattc gtatttctgc catgaaaaat      420

ggttatttat tttataattt aacagttagt gtatctaagt accctacttt taaatccttt      480

caatgtgtta ataatcaaac atccgtctac cttaatggag accttgttta cacttctaac      540

acgaccactg ctgttacatc aacgggtggg gattttaaag caagtggacc tggtacttac      600

agtggtatga agcagtttca ggccttaact tatttgttaa tggcactgta ccagaggtat      660

tttggcgatg accccctaga ggttgctagc atgtcatata atactggcaa ttttcagaag      720

gctttacctt ttactaataa aagttattta ggaaagttat gttttctgag agagggtaaa      780

tcactttggt ttaacaaatt tccccgttta aaggaaataa tgccccacct atacgggagg      840

tgtggtagtt ttatttgttc caaactcaaa ctgcgaaatg ggttattaca ctttaaattt      900

ctcgtttctc agcgggtttc ggtatgtggc aagggtttta atgtatgggt cttaccgccc      960

caaagtgtat ttttagtcca gaaaccatta ataatgggtt tatggtttaa ttcactttct     1020

atttcatttg cttatggtcc tcttcagggt ggatgcaagc aatctgtttt tcaaggtaga     1080

gcaacgtgtt gttttgctta ttcatataat ggccctcacg catgtaaagg tgtttacagt     1140

ggtgagttat ctaagttttt tgaatgtgga ttgttggttt atgttactaa gagtgatggc     1200

tcgcgtatac aaacagccac tgaaccacca gtcataactc aacacaacta taataatatt     1260

acattggata agtgtgttga gtataacata tatggcaaaa caggccaagg ttttattact     1320

aatgtaacta actctgctgc tagttataat tatttagcag attcaggatt ggctatctta     1380

gatacatctg gtgccataga catctttgtt gtacaaggtg ctcatggtct taattattat     1440

aaagttaacc cctgtgaaga tgttaaccaa caatttgtag tgtctggtgg tagtatagtt     1500

ggtattctca cctcacgtaa tgaaagtggc tctcagtcta ttgaggatca attttatatc     1560

aaacttgtta atggaacacg gcgtgttaga cgt                                  1593


<210>  38
<211>  1710
<212>  DNA
<213>  artificial sequence

<220>
<223>  DNA of THA50151

<400>  38
atgttggtga attcactgtt cctagtgacg tttttgtttg cactatgtag tgctaatttg       60

tatattaata atagttatgt ttactactac cagagtgcat ttagaccccc tactggttgg      120

catttacaag gaggtgctta tgcagtagtt aatagttctg tatattataa taacgcaggt      180

ggttcctctg aatgcactgc tggtattatt aaggatgttt ataatcttag cgcagctgct      240

atatctatga cagcaccacc tacaggtatg tcatggtctg cttcacaatt ttgtacagca      300

cactgtaact tttctgattt tacagtgttt gttacacatt gttttaaaag tggtcatgga      360

cattgtcctt taacaggtct aataccaagg aattacattc gcatctctgc tatgagaaat      420

ggtcttcttt tttataattt aacagttagt gtatctaaat accctaattt taaatctctt      480

caatgtgtta ataatgccac atctgtgtat ttaaatggtg accttgtttt ctcttctaac      540

atgactactg atgttacatc agcgggtgtg tattttaaag caggtggacc tgttatttat      600

agtgttatga aacagtttaa ggttctggct tactttgtta atggtactgt gcaagatgta      660

atcctgtgcg atgacacacc tagaggtttg ctagcctgtc aatataacac tggcaatttt      720

tcagatggct tttatccttt tactaatagt actttagtta gggaaaagtt cattgtctat      780

cgcgaaagta gtgttaatac tactctggcg ttaactaatt tcacttttac taatgtaagt      840

aatgcacagc ctaatagtgg tggtgttcat acttttcatt tatatcaaac gcaaacagct      900

cagagtggtt attataattt taatttgtca tttctgagtc agtttgtgta taaagcaagt      960

gattttatgt atgggtctta tcaccctagt tgttctttta gaccggaaac cattaacagt     1020

ggtttgtggt ttaattcctt gtcagtttct cttacttatg gacccctaca gggagggtgt     1080

aagcaatctg tctttagtgg tagggcaacg tgttgttatg cctactctta taatggccca     1140

agggcatgta aaggtgttta ttcaggtgaa ttaagcacga gttttgaatg tggattgctg     1200

gtttatgtta ctatgagtgc tggctctcgt atacagacta gaacggagcc cttagtatta     1260

acgcaacaca attataataa tattacttta gataagtgtg ttgactataa tatatatggc     1320

agagtaggcc aaggttttat tactaatgtg actgattctg ctgctaattt tagttattta     1380

gcagatggtg ggttagctat tttagatact tcgggtgcca tagatgtttt tgttgtacag     1440

ggcatctatg gtcttaatta ttacaaggtt aatccttgtg aagatgttaa ccaacagttt     1500

gtagtgtctg gtggtaatat agttggcttt ctcacttctc gtaatgaaac tggttctcag     1560

cctattgaga accaatttta tgttaaactc actaatgtaa gtcgtcgtca cagacgttcc     1620

attagtgaaa atgttacaag ctgtccatac gtaagttatg gcaggttttg tatacaacct     1680

gatggtctta ttaagcaaat agtaccgcaa                                      1710


<210>  39
<211>  1710
<212>  DNA
<213>  artificial sequence

<220>
<223>  DNA of THA40151

<400>  39
atgttggtga attcactgtt cctagtgacg tttttgtttg cactatgtag tgctaatttg       60

tatattaata atagttatgt ttactactac cagagtgcat ttagaccccc tactggttgg      120

catttacaag gaggtgctta tgcagtagtt aatagttctg tatattataa taacgcaggt      180

ggttcctctg aatgcactgc tggtattatt aaggatgttt ataatcttag cgcagctgct      240

atatctatga cagcaccacc tacaggtatg tcatggtctg tttcacaatt ttgtacagca      300

cactgtaact tttctgattt tacagtgttt gttacacatt gttttaaaag tggtcatgga      360

cattgtcctt taacaggtct aataccaaag aattacattc gcatctctgc tatgagaaat      420

ggtcttcttt tttataattt aacagttagt gtatctaaat accctaattt taaatctctt      480

caatgtgtta ataatgccac atctgtgtat ttaaatggtg accttgtttt ctcttctaac      540

atgactactg atgttacatc agcgggtgtg tattttaaag caggtggacc tgttatttat      600

agtgttatga aacagtttaa ggttctggct tactttgtta atggtactgt gcaagatgta      660

atcctgtgtg atgacacacc tagaggtttg ctagcctgtc aatataacac tggcagtttt      720

tcagatggct tttatccttt tactaatagt actttagtta gggaaaagtt cattgtctat      780

cgcgaaagta gtgttaatac tactctggcg ttaactaatt tcacttttac taatgtaagt      840

aatgcacagc ctaatagtgg tggtgttcat acttttcatt tatatcaaac gcaaacagct      900

cagagtggtt attataattt taatttgtca tttctgagtc agtttgtgta taaagcaagt      960

gattttatgt atgggtctta tcaccctagt tgttctttta gaccggaaac cattaacagt     1020

ggtttgtggt ttaattcctt gtcagtttct cttacttatg gacccctaca gggagggtgt     1080

aagcaatctg tctttagtgg tagggcaacg tgttgttatg cctactctta taatggccca     1140

agggcatgta aaggtgttta ttcaggtgaa ttaagcacga gttttgaatg tggattgctg     1200

gtttatgtta ctatgagtgc tggctctcgt atacagacta gaacggagcc cttagtatta     1260

acgcaacaca attataataa tattacttta gataagtgtg ttgactataa tatatatggc     1320

agagtaggcc aaggttttat tactaatgtg actgattctg ctgctaattt tagttattta     1380

gcagatggtg ggttagctat tttagatact tcgggtgcca tagatgtttt tgttgtacag     1440

ggcatctatg gtcttaatta ttacaaggtt aatccttgtg aagatgttaa ccaacagttt     1500

gtagtgtctg gtggtaatat agttggcttt ctcacttctc gtaatgaaac tggttctcag     1560

cctattgaga accaatttta tgttaaactc actaatgtaa gtcgtcgtca cagacgttcc     1620

attagtgaaa atgttacaag ctgtccatac gtaagttatg gcaggttttg tatacaacct     1680

gatggtctta ttaagcaaat agtaccgcaa                                      1710


<210>  40
<211>  1710
<212>  DNA
<213>  artificial sequence

<220>
<223>  DNA of THA20151

<400>  40
atgttggtga attcactgtt cctagtgacg tttttgtttg cactatgtag tgctaatttg       60

tatattaata atagttatgt ttactactac cagagtgcat ttagaccccc tactggttgg      120

catttacaag gaggtgctta tgcagtagtt aatagttctg tatattataa taacgcaggt      180

ggttcctctg aatgcactgc tggtattatt aaggatgttt ataatcttag cgcagctgct      240

atatctatga cagcaccacc tacaggtatg tcatggtctg cttcacaatt ttgtacagca      300

cactgtaact tttctgattt tacagtgttt gttacacatt gttttaaaag tggtcatgga      360

cattgtcctt taacaggtct aataccaaag aattacattc gcatctctgc tatgagaaat      420

ggtcttcttt tttataattt aacagttagt gtatctaaat accctaattt taaatctctt      480

caatgtgtta ataatgccac atctgtgtat ttaaatggtg accttgtttt ctcttctaac      540

atgactactg atgttacatc agcgggtgtg tattttaaag caggtggacc tgttatttat      600

agtgttatga aacagtttaa ggttctggct tactttgtta atggtactgt gcaagatgta      660

atcctgtgtg atgacacacc tagaggtttg ctagcctgtc aatataacac tggcaatttt      720

tcagatggct tttatccttt tactaatagt actttagtta gggaaaagtt cattgtctat      780

cgcgaaagta gtgttaatac tactctggcg ttaactaatt tcacttttac taatgtaagt      840

aatgcacagc ctaatagtgg tggtgttcat acttttcatt tatatcaaac gcaaacagct      900

cagagtggtt attataattt taatttgtca tttctgagtc agtttgtgta taaagcaagt      960

gattttatgt atgggtctta tcaccctagt tgttctttta gaccggaaac cattaacagt     1020

ggtttgtggt ttaattcctt gtcagtttct cttacttatg gacccctaca gggagggtgt     1080

aagcaatctg tctttagtgg tagggcaacg tgttgttatg cctactctta taatggccca     1140

agggcatgta aaggtgttta ttcaggtgaa ttaagcacga gttttgaatg tggattgctg     1200

gtttatgtta ctatgagtgc tggctctcgt atacagacta gaacggagcc cttagtatta     1260

acgcaacaca attataataa tattacttta gataagtgtg ttgactataa tatatatggc     1320

agagtaggcc aaggttttat tactaatgtg actgattctg ctgctaattt tagttattta     1380

gcagatggtg ggttagctat tttagatact tcgggtgcca tagatgtttt tgttgtacag     1440

ggcatctatg gtcttaatta ttacaaggtt aatccttgtg aagatgttaa ccaacagttt     1500

gtagtgtctg gtggtaatat agttggcttt ctcacttctc gtaatgaaac tggttctcag     1560

cctattgaga accaatttta tgttaaactc actaatgtaa gtcgtcgtca cagacgttcc     1620

attagtgaaa atgttacaag ctgtccatac gtaagttatg gcaggttttg tatacaacct     1680

gatggtctta ttaagcaaat agtaccgcaa                                      1710


<210>  41
<211>  1710
<212>  DNA
<213>  artificial sequence

<220>
<223>  DNA of THA90151

<400>  41
atgttggtga attcactgtt cctagtgacg tttttgtttg cactatgtag tgctaatttg       60

tatattaata atagttatgt ttactactac cagagtgcat ttagaccccc tactggttgg      120

catttacaag gaggtgctta tgcagtagtt aatagttctg tatattataa taacgcaggt      180

ggttcctctg aatgcactgc tggtattatt aaggatgttt ataatcttag cgcagctgct      240

atatctatga cagcaccacc tataggtatg tcatggtctg cttcacaatt ttgtacagca      300

cactgtaact tttctgattt tacagtgttt gttacacatt gttttaaaag tggtcatgga      360

cattgtcctt taacaggtct aataccaaag aattacattc gcatctctgc tatgagaaat      420

ggtcttcttt tttataattt aacagttagt gtatctaaat accctaattt taaatctctt      480

caatgtgtta ataatgccac atctgtgtat ttaaatggtg accttgtttt ctcttctaac      540

atgactactg atgttacatc agcgggtgtg tattttaaag caggtggacc tgttatttat      600

agtgttatga aacagtttaa ggttctggct tactttgtta atggtactgt gcaagatgta      660

atcctgtgtg atgacacacc tagaggtttg ctagcctgtc aatataacac tggcaatttt      720

tcagatggct tttatccttt tactaatagt actttagtta gggaaaagtt cattgtctat      780

cgcgaaagta gtgttaatac tactctggcg ttaactaatt tcacttttac taatgtaagt      840

aatgcacagc ctaatagtgg tggtgttcat acttttcatt tatatcaaac gcaaacagct      900

cagagtggtt attataattt taatttgtca tttctgagtc agtttgtgta taaagcaagt      960

gattttatgt atgggtctta tcaccctagt tgttctttta gaccggaaac cattaacagt     1020

ggtttgtggt ttaattcctt gtcagtttct cttacttatg gacccctaca gggagggtgt     1080

aagcaatctg tctttagtgg tagggcaacg tgttgttatg cctactctta taatggccca     1140

agggcatgta aaggtgttta ttcaggtgaa ttaagcacga gttttgaatg tggattgctg     1200

gtttatgtta ctatgagtgc tggctctcgt atacagacta gaacggagcc cttagtatta     1260

acgcaacaca attataataa tattacttta gataagtgtg ttgactataa tatatatggc     1320

agagtaggcc aaggttttat tactaatgtg actgattctg ctgctaattt tagttattta     1380

gcagatggtg ggttagctat tttagatact tcgggtgcca tagatgtttt tgttgtacag     1440

ggcatctatg gtcttaatta ttacaaggtt aatccttgtg aagatgttaa ccaacagttt     1500

gtagtgtctg gtggtaatat agttggcttt ctcacttctc gtaatgaaac tggttctcag     1560

cctattgaga accaatttta tgttaaactc actaatgtaa gtcgtcgtca cagacgttcc     1620

attagtgaaa atgttacaag ctgtccatac gtaagttatg gcaggttttg tatacaacct     1680

gatggtctta ttaagcaaat agtaccgcaa                                      1710


<210>  42
<211>  1710
<212>  DNA
<213>  artificial sequence

<220>
<223>  DNA of THA60151

<400>  42
atgttggtga attcactgtt cctagtgacg tttttgtttg cactatgtag tgctaatttg       60

tatattaata atagttatgt ttactactac cagagtgcat ttagaccccc tactggttgg      120

catttacaag gaggtgctta tgcagtagtt aatagttctg tatattataa taacgcaggt      180

ggttcctctg aatgcactgc tggtattatt aaggatgttt ataatcttag cgcagctgct      240

atatctatga cagcaccacc tataggtatg tcatggtctg cttcacaatt ttgtacagca      300

cactgtaact tttctgattt tacagtgttt gttacacatt gttttaaaag tggtcatgga      360

cattgtcctt taacaggtct aataccaaag aattacattc gcatctctgc tatgagaaat      420

ggtcttcttt tttataattt aacagttagt gtatctaaat accctaattt taaatctctt      480

caatgtgtta ataatgccac atctgtgtat ttaaatggtg accttgtttt ctcttctaac      540

atgactactg atgttacatc agcgggtgtg tattttaaag caggtggacc tgttatttat      600

agtgttatga aacagtttaa ggttctggct tactttgtta atggtactgt gcaagatgta      660

atcctgtgtg atgacacacc tagaggtttg ctagcctgtc aatataacac tggcaatttt      720

tcagatggct tttatccttt tactaatagt actttagtta gggaaaagtt cattgtctat      780

cgcgaaagta gtgttaatac tactctggcg ttaactaatt tcacttttac taatgtaagt      840

aatgcacagc ctaatagtgg tggtgttcat acttttcatt tatatcaaac gcaaacagct      900

cagagtggtt attataattt taatttgtca tttctgagtc agtttgtgta taaagcaagt      960

gattttatgt atgggtctta tcaccctagt tgttctttta gaccggaaac cattaacagt     1020

ggtttgtggt ttaattcctt gtcagtttct cttacttatg gacccctaca gggagggtgt     1080

aagcaatctg tctttagtgg tagggcaacg tgttgttatg cctactctta taatggccca     1140

agggcatgta aaggtgttta ttcaggtgaa ttaagcacga gttttgaatg tggattgctg     1200

gtttatgtta ctatgagtgc tggctctcgt atacagacta gaacggagcc cttagtatta     1260

acgcaacaca attataataa tattacttta gataagtgtg ttgactataa tatatatggc     1320

agagtaggcc aaggttttat tactaatgtg actgattctg ctgctaattt tagttattta     1380

gcagatggtg ggttagctat tttagatact tcgggtgcca tagatgtttt tgttgtacag     1440

ggcatctatg gtcttaatta ttacaaggtt aatccttgtg aagatgttaa ccaacagttt     1500

gtagtgtctg gtggtaatat agttggcttt ctcacttctc gtaatgaaac tggttctcag     1560

cctattgaga accaatttta tgttaaactc actaatgtaa gtcgtcgtca cagacgttcc     1620

attagtgaaa atgttacaag ctgtccatac gtaagttatg gcaggttttg tatacaacct     1680

gatggtctta ttaagcaaat agtaccgcaa                                      1710


<210>  43
<211>  1657
<212>  DNA
<213>  artificial sequence

<220>
<223>  DNA of AF193423

<400>  43
atgttgggga agtcactgtt tttagtgacc attttgtgtg cactatgtag tgcaaatttg       60

ttcgattctg ctaataatta tgtgtactac taccaaagtg cctttaggcc tccaaatgga      120

tggcatttgc aagggggtgc ttatgcagta gtgaattcca ctaattatag taataatgca      180

ggttctgcac ctcagtgcac tgttggtgtt attaaggacg tctataatca aagtgcggct      240

tctatagcta tgacagcacc tcttcagggt atggcttggt ctaagtcaca attttgtagt      300

gcacactgta acttttctga aattacagtt tttgtcacac attgttatag tagtggtagc      360

gggtcttgtc ctataacagg catgattcca cgtgatcata ttcgtatttc tgcaatgaaa      420

aatggttctt tattttataa tttaacagtt agcgtatcta aataccctaa ttttaaatct      480

tttcaatgtg ttaacaactt cacatctgtt tatttaaatg gtgatcttgt ttttacttcc      540

aacaaaacta ctgatgttac gtcagcaggt gtgtatttta aagcaggtgg acctgtaaat      600

tataatatta tgaaagaatt taaggttctt gcttactttg ttaatggtac agcacaagat      660

gtaattttgt gcgataattc ccccaagggt ttgctagcct gtcaatataa cactggcaat      720

ttttcagatg gcttttatcc ttttactaat agtactttag ttagggaaaa gttcattgtc      780

tatcgcgaaa gtagtgttaa tactactctg gcgttaacta atttcacttt tactaatgta      840

agtaatgcac agcctaatag tggtggtgtt aatacttttc atttatatca aacacaaaca      900

gctcagagtg gttattataa ttttaatttg tcatttctga gtcagtttgt gtataaggca      960

agtgatttta tgtatgggtc ttaccaccct agttgttctt ttagaccaga aaccattaat     1020

agtggtttgt ggtttaattc cttgtcagtt tctcttactt atggacccct acagggaggg     1080

tgtaagcaat ctgtttttag tggtaaggca acgtgttgtt atgcctactc ttataatggc     1140

ccaagggcat gtaaaggtgt ttattcaggt gaattaagca tgaattttga atgtggattg     1200

ctggtttatg ttactaagag tcatggctct cgtatacaga ctagaacgga gcccttagta     1260

ttaacgcaac acaattataa taatattact ttagataagt gtgttgctta taatatatat     1320

ggcagagtag gccaaggttt tattactaat gtgactgatt ctgctgctaa ttttagttat     1380

ttagcagatg gtgggttagc tattttagat acgtcgggtg ccatagatgt ttttgttgta     1440

aagggcagct atggtcttaa ttattacaag gttaatcctt gtgaagatgt taaccaacag     1500

tttgtagtgt ctggtggcaa tatagttggc attcttactt ctagaaatga aacaggttct     1560

gaacaggttg agaaccagtt ttatgttaag ttaaccaata gctcacatcg tcgcaggcgt     1620

tctattggcc aaaacgtaac aacttgccct tatgtta                              1657


<210>  44
<211>  1643
<212>  DNA
<213>  artificial sequence

<220>
<223>  DNA of AY043312

<400>  44
atgttgggga agtcactgtt tttagtgacc attttgtgtg cactatgtag tgcaaatttg       60

tttgattctg ccaataatta tgtgtactac taccaaagtg cctttaggcc tccaaatgga      120

tggcatctgc aagggggtgc ttatgcagta gtgaattcta ctaatcatac taataatgcc      180

ggttctgcaa gtgggtgcac tgttggtgtt attaaggacg tctataatca aagtgcggct      240

tccatagcta tgacagcacc tcttcagggt atggcttggt ctaagtcaca attttgtagt      300

gcacactgta acttttctga aattacagtt tttgtcacac attgttatag tagtggtaca      360

gggtcttgtc ctataacagg catgattgca cgtgatcata ttcgtatttc tgcaatgaaa      420

aatggttctt tattttataa tttaacagtt agcgtatcta aataccctaa ttttaagtct      480

tttcaatgtg ttaacaactt cacatctgtt tatttaaatg gtgatcttgt ttttacttcc      540

aacaaaacta ctgatgttac gtcagcaggt gtgtatttta aagcaggtgg acctgtaaat      600

tatagtatta tgaaagaatt taaggttctt gcttactttg ttaatggtac agcacaagat      660

gtaattttgt gtgacaattc ccccaagggt ttgctagcct gtcaatataa cactggcaat      720

ttttcggatg gcttttatcc ttttactaat agtactttag ttagggaaaa gttcattgtc      780

tatcgcgaaa gtagtgttaa tactactctg gcgttaacta atttcacttt tactaatgta      840

agtaatgcac agcctaatag tggtggtgtt catacttttc atttatatca aacacaaaca      900

gctcagagtg gttattataa ttttaatttg tcatttctga gtcagtttgt gtataaggca      960

agtgatttta tgtatgggtc ttaccaccct agttgttctt ttagaccaga aaccattaat     1020

agtggtttgt ggtttaattc cttgtcagtt tctcttactt acggacccct acagggaggg     1080

tgtaagcaat ctgtctttag tggtaaggca acgtgttgtt atgcctactc ttataatggc     1140

ccaagggcat gtaaaggtgt ttatttaggt gaattaagca cgagttttga atgtggattg     1200

ctggtttatg ttactaagag tgatggctct cgtatacaga ctagaacgga gcccttagta     1260

ttaacgcaac acaattataa taatattact ttagataagt gtgttgccta taatatatat     1320

ggcagagtag gccaaggttt tattactaat gtgactgatt ctgctgctaa ttttagttat     1380

ttagcagatg gtgggttagc tattttagat acttcgggtg ccatagatgt ttttgttgta     1440

cagggcagct atggtcttaa ttattacaag gttaatcctt gtgaagatgt taaccaacag     1500

tttgtagtgt ctggtggcaa tatagttggc attcttactt ctagaaatga aacaggttct     1560

gaacaggttg agaaccagtt ttatgttaag ttagccaata gctcacatcg tcgcaggcgt     1620

tctattggcc aaaatgtaac aag                                             1643


<210>  45
<211>  5
<212>  PRT
<213>  artificial sequence

<220>
<223>  F fusion cleavage motif 4

<400>  45

Arg Arg Gln Lys Arg 
1               5   


<210>  46
<211>  5
<212>  PRT
<213>  artificial sequence

<220>
<223>  F fusion cleavage motif 5

<400>  46

Gly Arg Gln Ala Arg 
1               5   


