                         SEQUENCE LISTING

<110>  The Government of the United States of America as 
       Represented by the Secretary of the Department of Health and 
       Human Services
       Winchell, Jonas M
       Benitez, Alvaro J
 
<120>  METHODS AND COMPOSITIONS FOR DETECTION OF LEGIONELLA

<130>  6395-89127-02

<150>  US 61/658,627
<151>  2012-06-12

<160>  34    

<170>  PatentIn version 3.5

<210>  1
<211>  708
<212>  DNA
<213>  Legionella pneumophila

<400>  1
ttgtttatga agatgaaatt ggtgactgcg gctgttatgg ggcttgcaat gtcaacagca       60

atggctgcaa ccgatgccac atcattagct acagacaagg ataagttgtc ttatagcatt      120

ggtgccgatt tggggaagaa ttttaaaaat caaggcatag atgttaatcc ggaagcaatg      180

gctaaaggca tgcaagacgc tatgagtggc gctcaattgg ctttaaccga acagcaaatg      240

aaagacgttc ttaacaagtt tcagaaagat ttgatggcaa agcgtactgc tgaattcaat      300

aagaaagcgg atgaaaataa agtaaaaggg gaagcctttt taactgaaaa caaaaacaag      360

ccaggcgttg ttgtattgcc aagtggtttg caatacaaag taatcaatgc tggaaatggt      420

gttaaacccg gtaaatcgga tacagtcact gtcgaataca ctggtcgtct gattgatggt      480

accgtttttg acagtaccga aaaaactggt aagccagcaa cttttcaggt ttcacaagtt      540

atcccaggat ggacagaagc tttgcaattg atgccagctg gatcaacttg ggaaatttat      600

gttccctcag gtcttgcata tggcccacgt agcgttggcg gacctattgg cccaaatgaa      660

actttaatat ttaaaattca cttaatttca gtgaaaaaat catcttaa                   708


<210>  2
<211>  637
<212>  DNA
<213>  Legionella pneumophila

<400>  2
aaacaggact tgcgcccccc aatcctctcg gtaaaacatt ttttgccttg accttggggt       60

tttccgtaag tcctgaaaat atattcggta tgctggcggg attttgctta catgccggca      120

ttttatgtta taattaaagt gtacagaatg gggggcgacc tggcttcgac gtgggttgca      180

aaaccggaag tgcatgccga gaaggagatc tctcgtaaat aagactcaat taaatataaa      240

tgcaaacgat gaaaactttg ctggtgggga agctatcgct gcctaataag cactttagtt      300

aaaccatcac tgtgtactgg ccaataaacc cagtatcccg ttcgaccgag cccgcttatc      360

ggtatcgaat caacggtcat aagagataag ctagcgtcct aatctatccc gggttatggc      420

gcgaaactca gggaatcgct gtgtatcatc ctgcccgtcg gaggagccac agttaaattc      480

aaaagacaag gctatgcatg tagagctaaa ggcagaggac ttgcggacgc gggttcgatt      540

cccgccgcct ccaccaattc attatccgat acagtccaat accgggtctt tcccaaatac      600

ctgaatcttc tacacatctt gtttattcca aacaaac                               637


<210>  3
<211>  852
<212>  DNA
<213>  Legionella pneumophila

<400>  3
atgacctcaa tatcctcaaa aactcagacg tttaaagaaa cagtagtcta tggagttgat       60

aagtttaggc ttttagctgt tttaagaaat atatgggatt accgcttgct tttatggatt      120

ttttgtaaac gagatctcaa agggcgttac agtcaaacca tcttgggatt gggttgggtt      180

attttaactc ctttgattac ggttggggtg tttgtcattg tttttggcat catgataaag      240

gtacctaccg atgggctgcc tactgtcatg ttctatttgg ttgcggttat accttggtat      300

tcctttttaa atgttctcaa cccttccata caaatgattg agggaaatgc ttcgttaata      360

acaaaggtct attttccaag agcgttgata ggcggtgcct atgctatggg agctgcggtt      420

gattttctga tggcttatgt gtttttgata accccctttg caatttatta tggcctttgg      480

tctatcaagt tattaattat tatgccattc ctgctgatat ctaccttaat gattggatta      540

ggtattggtt tggttttagc acctatcaat gcaaaatata gggatattaa acattttatg      600

cctctggctt tgcagttatt ttattactcc actccagcga tttaccctgt ttctgctgtg      660

cctgtgtggg ctaaaccatg gtatgctgtt aatccattat ctcttgttat caccagttat      720

cgagaggtgt taatggggca ttggccatca cctactataa taatgacatt atctggtatg      780

gcaattataa ctttccttgt ggggcttgtt gcatttcatc acatggagca taaggtagtt      840

gatattttat ga                                                          852


<210>  4
<211>  14
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide primer

<400>  4
ggcgacctgg cttc                                                         14


<210>  5
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide primer

<400>  5
ggtcatcgtt tgcatttata ttta                                              24


<210>  6
<211>  12
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide probe

<400>  6
cgtgggttgc aa                                                           12


<210>  7
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide primer

<400>  7
ttgtcttata gcattggtgc cg                                                22


<210>  8
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide primer

<400>  8
ccaattgagc gccactcata g                                                 21


<210>  9
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide probe

<400>  9
cggaagcaat ggctaaaggc atgca                                             25


<210>  10
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide primer

<400>  10
tgcctctggc tttgcagtta                                                   20


<210>  11
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide primer

<400>  11
cacacaggca cagcagaaac a                                                 21


<210>  12
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide probe

<400>  12
tttattactc cactccagcg at                                                22


<210>  13
<211>  625
<212>  DNA
<213>  Legionella bozemanii

<400>  13
ggacgaggga tacccgtcga tattcataaa gaagaaggac gatccgctgc tgaagtgatt       60

atgacagtgc ttcacgccgg tggtaaattt gatgataatt cttataaagt atcgggtggt      120

ttgcatggag tgggtgtttc tgtagttaat gccttatccg aggaattaca tttaaccgta      180

cgtcgtcatg gtaaaatcca tgagcaacat taccgtaatg gagttccaga tgcgccaatg      240

gcagaaacag gagatgcatc gacaaccgga actcaaattt ggtttaaacc aagtgccgaa      300

acgttttcta atattgagtt tcactatgat attttagcaa aacggctaag agaattatct      360

tatttaaatt caggtgtttg catccattta ttcgatgagc gatcccaaag gcaagacact      420

tttcattatg aaggtggaat cacggcattt gtggagcatc tcaataaaaa taaaaatact      480

attatgccca ctgttttttc tatgaccgct gaaaaagata acattgttgt tgaactgtct      540

atgcagtgga atgattctta tcaagaaaca ctttattgct ttacaaataa tatccctcag      600

cgtgacggtg gaacacatat ggctg                                            625


<210>  14
<211>  1794
<212>  DNA
<213>  Legionella dumoffii

<400>  14
atgtttactt tcattaccgg actcctaaat agtggacttg aagcattcga tgaaacattt       60

aaagataccc cagcccataa gatcgttttt gcgacagcag cactttattt tatttggcaa      120

cagtacccta caataacgca ggcctatcgt tcccgaaaca acaccacttt gaaacagcgt      180

ttaattgaca tagcctacag tttgggcaaa aatttaccac cagtaaaatc ctacttggat      240

aaggaactga ataaagatct gcagaacact aaagacaaat taaaggaatt acgtgcacaa      300

atgaccctcc aagataaaat tcctgaaaaa aagacacccg caattttcct tttaaaagaa      360

tttggtatag ctccggaaga atgtcttttt aattttgctg gtataaaaga gggagacgag      420

gccaggcgat ttactgttaa ggaaggagat gggaaggatt caggtgcgct ttatgcagtt      480

catccccggg aacttaccga attacttaaa gaggtctatg caaaaagttc tttaatcaat      540

cccctgcacg ataaatggcc acggattgtt gccatgcagg ctgagattat tcgctggtgc      600

caggatttat ttggcggctc taaagaagct tatggactta tcacccatgg aggtacgaca      660

agtattattg aagccatggc tgcttatgtc actcatgcac gggcgaaagg aattaaaaat      720

cctgaaattg tggtaccgga aacagcacac gcagcattta aaaaagcagc tgatttgacc      780

ggtgcccgat tgattaccgt tccagttgat ccaaaatccg gtgctgttaa cgcacatgta      840

atgagaaaat acatttcggg caatactgcc gtaattgtgg gatcagctcc ctctttcatg      900

tatggtgtaa atgatccaat ccctgagtta gggaaggtag ctcaggaatt gggtgtccca      960

ttgcatgtag atgcatgctt gggtggattt ttaactgcat ttctggagac ttctaaaact     1020

cctatggatt ttcgcgtgaa aggggttact tccatatcag cagatttgca caaatacggt     1080

aattgcccta aaggcacttc tgtttgcctt tttagtgaag actcccctgt tttatcagta     1140

tatgctgcgc taaactggtc aggcgggctt tatactactc ccggtatttt agacggttca     1200

accagcgggg cacgggttgc agaaatatat accactctct cctattacgg acgtaaacaa     1260

tatcaggaaa tctccaggag tattataaca atgcgccaac gtctgcaaga caaggttgcc     1320

gaactctata aacctgatgc atcaggaaag cgcgacatct atatttttgg aaaccctcaa     1380

tggtccgttc tgggtttccg gagtgatact ttgaaccctc attttattgc gaacgagctg     1440

gataagcgcg gttggaaact gaattcacta caaaaacctg atggattcca tttgtgcttg     1500

actcatgtgc atactttagt tgatcgcttt gaagataaat ttattaaaga cctgcaagag     1560

tcgatagagg ccgtgaagca atatcccgct gacaaaaaac ctgagggtaa cgttaaagtc     1620

tatggaacca taggaatact gcctacccaa gtacaagaag taatatgccg acaataccaa     1680

agagcccgcc tatattatga agcgacatgt acccaattag gatttttctc aaccccagac     1740

agacaagaga ataaaatgga tatttccgaa gaaaagaaag aactcacctt ataa           1794


<210>  15
<211>  216
<212>  DNA
<213>  Legionella feeleii

<400>  15
atgggccttg gcttttttga taataaaaaa ccgactatca atgcagatga agtaagggct       60

aacattgctc ttataaaccg gtttatcggt cttttagata aagcgagtga taatccatca      120

aattctcaag ctcgagacaa gctggttgat ctcggcaaca aacttgggga agcactcgag      180

caacctgaaa taacggaatc taaaaaatta acataa                                216


<210>  16
<211>  267
<212>  DNA
<213>  Legionella longbeachae

<400>  16
atggcatatg cgaaaggttt ttttagcgtg tcttcaagtt ctgcgaatga aacaagtgat       60

gagaaggcca ctaccgaaga tgccgcattt ttggccaata ctcttgaagc attggaaaag      120

cgaatcactc aaataatgaa agtgaaaata caaacccaaa atactgcaga agttgctgat      180

tgtgagagcg caattcaaca attagaaaag tgtcgccaag aagttgtatc tcatgctcag      240

ataagtcatt cgccacgtcc ttggtag                                          267


<210>  17
<211>  363
<212>  DNA
<213>  Legionella micdadei

<400>  17
atgttgcgca atccgtatac gcattttaaa ttgacaagtg agagcaagag ttcagcgaca       60

gatttgcttt ccagttcttc cccgacagaa ggagaacctt ccggtgtgcc tatcgctgtc      120

ggaatagata cattacatag tttgcaaagg ttaaatagtc agaccgataa aatgatggcg      180

attagtaaga ctccagggaa tatgactgca tctgcaacgt taggtaaagc acttaaaagg      240

actggaagcg ctatcaataa tgaatttcct aaagagattc aagaagttca aatggctcaa      300

gcagaatcaa gtcatgattc gtcccccgaa gaaactacat ctgtaagctt ttcaaggccc      360

taa                                                                    363


<210>  18
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide primer

<400>  18
tccgctgctg aagtgattat g                                                 21


<210>  19
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide primer

<400>  19
catgcaaacc acccgatact                                                   20


<210>  20
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide probe

<400>  20
gtgcttcacg ccggtggtaa attt                                              24


<210>  21
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide primer

<400>  21
caggaaagcg cgacatctat                                                   20


<210>  22
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide primer

<400>  22
atccagctcg ttcgcaataa                                                   20


<210>  23
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide probe

<400>  23
tggaaaccct caatggtccg ttct                                              24


<210>  24
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide primer

<400>  24
aaccggttta tcggtcttt                                                    19


<210>  25
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide primer

<400>  25
atcaaccagc ttgtctcg                                                     18


<210>  26
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide probe

<400>  26
gcgagtgata atccatcaaa ttctcaagct                                        30


<210>  27
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide primer

<400>  27
ctgcagaagt tgctgattgt g                                                 21


<210>  28
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide primer

<400>  28
gacgtggcga atgacttatc t                                                 21


<210>  29
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide probe

<400>  29
tgtcgccaag aagttgtatc tcatgct                                           27


<210>  30
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide primer

<400>  30
tgacaagtga gagcaagagt t                                                 21


<210>  31
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide primer

<400>  31
gtatctattc cgacagcgat agg                                               23


<210>  32
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide probe

<400>  32
acagaaggag aaccttccgg tgtg                                              24


<210>  33
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide probe

<400>  33
tgcttcacgc cggtggtaaa tttg                                              24


<210>  34
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide probe.

<400>  34
agcgagtgat aatccatcaa attctcaagc                                        30


