                         SEQUENCE LISTING

<110>  Boehringer Ingelheim Vetmedica GmbH
 
<120>  Schmallenberg virus (SBV) vaccine, methods of production and uses
        thereof

<130>  P01-2825

<160>  8     

<170>  PatentIn version 3.3

<210>  1
<211>  839
<212>  DNA
<213>  Schmallenberg virus

<400>  1
agtagtgagc tccactatta actacagaaa tatgtcaagc caattcattt ttgaagatgt     60

accacaacgg aatgcagcta catttaaccc ggaggtcggg tatgtggcat ttattggtaa    120

gtatgggcaa caactcaact tcggtgttgc tagagtcttc ttcctcaacc agaagaaggc    180

caagatggtc ctacataaga cggcacaacc aagtgtcgat cttacttttg gtggggtcaa    240

atttacagtg gttaataacc attttcccca atatgtctca aatcctgtgc cagacaatgc    300

cattacactt cacaggatgt caggatatct agcacgttgg attgctgata catgcaaggc    360

tagtgtcctc aaactagctg aagctagtgc tcagattgtc atgccccttg ctgaggttaa    420

gggatgcacc tgggccgatg gttatacaat gtatcttgga tttgcacctg gggccgaaat    480

gttccttgat gcttttgact tctatccact agttattgaa atgcataggg tcctcaagga    540

caatatggat gtaaatttta tgaaaaaagt cctccgccaa cgctatggaa caatgactgc    600

tgaagaatgg atgactcaga aaataacaga aataaaagct gcttttaatt ctgttggaca    660

gcttgcctgg gccaaatctg gattctctcc tgctgctaga accttcttgc agcaattcgg    720

tatcaacatc taaacctctt catcacagat cttcaatttc cgtgcaatat gtctatgtat    780

tgcacaccat tatactgcaa ggcttctgtt aagatagtta ataagtggag aacactact     839


<210>  2
<211>  4373
<212>  DNA
<213>  Schmallenberg virus

<400>  2
agtagtgaac taccacaatc aaaatgcttc tcaacattgt cttgatatct aacttagcct     60

gtttagcttt tgcactccca cttaaggaag gcactagagg gtctaggtgc ttcctgaatg    120

gcgaactggt taaaactgtt aacacatcaa aggtcgtttc agaatgctgt gtgaaagacg    180

acatatctat cattaaatca aatgctgaac attataaatc aggagatcgg ttggctgctg    240

taataaaata ttatcgttta tatcaggtga aggattggca ttcttgcaat ccaatttatg    300

atgaccacgg ttcctttatg atattagata tagataatac tggcacatta atccctaaaa    360

tgcatacatg cagagttgaa tgcgaaatag cactgaataa agatactggc gaagttatat    420

tgaattcata tcgaattaac cactaccgaa tctcgggcac aatgcatgta tcaggttggt    480

ttaaaaacaa aattgagatt cctttggaaa acacatgcga atccattgag gtaacatgtg    540

gattaaaaac acttaatttt catgcatgtt tccataccca taagtcatgc acccgctatt    600

ttaaaggatc aatcctgccg gaattgatga tcgaatcatt ttgtacgaat cttgaattaa    660

tactgctagt aactttcata ttagttgggt ctgtcatgat gatgatattg acgaaaacat    720

atatagtata tgtgttcatt cctatatttt atccatttgt gaaattatat gcttatatgt    780

acaacaaata ttttaaattg tgtaaaaatt gcctgttagc agtacatccc tttacaaatt    840

gcccatcgac atgcatctgt ggaatgattt acactaccac tgaatcactc aaattgcatc    900

gcatgtgtaa caattgttct ggctataaag cattgccgaa aacaaggaaa ttgtgtaaaa    960

gtaaaatatc caatatagtg ctatgtgtga taacatcact gatatttttc tcatttatca   1020

cacctatatc gagtcaatgt atcgatatag aaaaactgcc agacgagtat attacatgta   1080

aaagagagct agctaatatc aaaagcttga caattgatga cacatatagc tttatatatt   1140

cctgtacatg cataattgtg ttaatattac ttaaaaaggc agcaaagtat atcttgtact   1200

gcaactgcag cttttgtggt atggtacatg aacgacgtgg attgaagata atggacaact   1260

ttacaaacaa gtgcctaagt tgtgtatgcg cagaaaacaa gggcttaaca attcacagag   1320

cctctgagaa atgtctgttc aaatttgaat caagttataa taggaccggg ttgataatct   1380

ttatgcttct gttagtccca acaattgtaa tgacgcaaga aactagtatt aactgcaaaa   1440

acattcaatc aactcagctt acaatagagc acctgagtaa gtgcatggca ttttatcaaa   1500

ataaaacaag ctcaccagtt gtaatcaatg aaataatttc agatgcttca gtagacgaac   1560

aagaattaat aaaaagttta aacttgaact gtaatgtcat agataggttt atttccgaat   1620

ctagtgttat tgagactcaa gtttattatg agtatataaa atcacagttg tgccctctcc   1680

aagtgcatga tattttcact atcaattcag caagtaacat acaatggaaa gcactggccc   1740

gaagtttcac cttaggagtg tgcaatacga atcctcataa acatatatgt agatgcttgg   1800

agtctatgca aatgtgcaca tcaaccaaga cagaccacgc tagggaaatg tcaatatatt   1860

atgatggtca tccagatcgc tttgagcatg acatgaaaat aatattgaat ataatgagat   1920

atatagtccc tggattaggt cgagtcttgc ttgatcaaat caaacaaaca aaagactacc   1980

aagctttacg ccacatacaa ggtaagcttt ctcctaaatc gcagtcaaat ttacaactta   2040

aaggatttct ggaatttgtt gattttatcc ttggtgcaaa cgtgacaata gaaaaaaccc   2100

ctcaaacatt aactacatta tctttgataa aaggagccca cagaaacttg gatcaaaaag   2160

atccaggtcc aacaccaata ctggtatgca aatcaccaca aaaagtggta tgctactcac   2220

cacgtggtgt cacacaccca ggagattata tatcatgcaa atctaagatg tataagtggc   2280

catctttagg ggtatacaaa cataatagag accagcaaca agcctgcagc agtgacacac   2340

attgcctaga gatgtttgaa ccagcagaaa gaacaataac tacaaaaata tgcaaagtaa   2400

gtgatatgac ttattcagaa tcgccatata gtactggaat accatcatgc aacgtgaaga   2460

gatttggatc atgtaatgta aggggtcatc aatggcaaat tgcagaatgc tcaaatggct   2520

tattttacta tgtttcagct aaagcccatt cgaaaactaa cgatataaca ctgtactgtt   2580

tatcagcaaa ttgcctggac ttgcgttatg cattcagatc cagtagttgt tcagatatag   2640

tatgggatac aagttatcga aataaattaa cacctaaatc tattaatcat ccagatattg   2700

aaaactacat agcagcgctt cagtcagata ttgcaaatga tttaactatg cactacttta   2760

aaccattaaa aaaccttcca gcaataattc ctcaatacaa aacaatgaca ttgaatgggg   2820

acaaggtatc aaatggtatt agaaatagtt atatcgagtc gcacatccct gcaattaatg   2880

gtttatcagc agggattaat attgccatgc caaatggaga aagcctcttt tccattatta   2940

tctatgtcag aagagtaata aataaagcat cgtatcgatt tctatatgaa acaggaccca   3000

caattggaat aaatgccaag cacgaagagg tatgtaccgg gaagtgccca agcccaatac   3060

cacatcaaga tggttgggtc acattctcaa aggaaagatc aagtaattgg ggctgtgaag   3120

aatggggttg cttggcaata aatgatggtt gtttatatgg gtcatgtcaa gacataataa   3180

ggcctgaata taagatatac aagaagtcta gtattgaaca aaaggatgtt gaagtttgta   3240

taaccatggc ccatgaatca ttctgcagta ccgttgatgt tctccaacct ttaattagcg   3300

acaggataca attagatatc caaacgattc aaatggactc tatgccaaat ataattgcag   3360

tcaagaatgg gaaagtttat gttggagata tcaatgactt aggttcgaca gcaaagaaat   3420

gtggctcagt ccaattatat tctgaaggga tcattggatc gggaacccca aaatttgatt   3480

atgtttgcca tgcattcaat cgtaaagatg tcatccttcg aagatgcttt gataactcat   3540

atcagtcttg tcttctcttg gaacaagata atacattaac tattgcttct accagtcata   3600

tggaagtgca taaaaaagtt tcaagcgtgg gtacaatcaa ttataaaatt atgttagggg   3660

attttgacta caatgcatat tcaacacaag caacagtcac aatagatgag atcaggtgtg   3720

gtggttgtta tggctgccct gaaggaatgg cttgcgcact caaattgagt accaatacca   3780

tcgggagttg ttcaataaaa agtaactgcg atacatacat taaaataata gcagtcgatc   3840

cgatgcagag cgagtattcc attaagttaa actgcccact agcaacagag acagtttcag   3900

taagtgtgtg ctcagcttct gcttacacaa aaccttcaat atctaaaaat caaccaaaaa   3960

ttgttttgaa ttccttagat gaaacatctt acatcgagca acatgataaa aagtgttcta   4020

catggctttg cagagtttat aaagaaggga ttagcgtaat atttcagcct ctatttggca   4080

acctatcttt ctattggaga ctgacaatat atataataat ctctttgatt atgctaattc   4140

tgtttctata catattaata ccactgtgca aacggctaaa aggtttattg gaatacaatg   4200

agagaatata ccaaatggaa aataaattta agtgataagc cttataacaa tgagcaatta   4260

taaatgaata aataaaaaca ataaaagata aacaaataac aacatatata tgtggttaca   4320

catatatatg taattattca gctgagaagt ttttcatgtg gtagaacact act          4373


<210>  3
<211>  6882
<212>  DNA
<213>  Schmallenberg virus

<400>  3
agtagtgtac ccctaattac aatcactatg gagacataca agattaacat ttttagagat     60

aggatcaacc agtgtcgaag tgctgaagaa gccaaagaca ttgttgctga tcttctcatg    120

gctagacatg actactttgg tagagaggta tgttattacc tggatatcga attccggcag    180

gatgttccag cttacgacat acttcttgaa tttctgccag ctggcactgc tttcaacatt    240

cgcaattgta caccagacaa ttttatcatt cacaatggca agctttatat cattgactat    300

aaagtatcaa ctgatcatgc atatggtcaa aaaacttatg aaaagtacac ccagatcttt    360

ggagacgcat tgtcagaatt gccgtttgat tttgaagttg tgatcatccg tgctgaccct    420

ctgcgagata ctatccatgt taattcaaat caattcttgg aaatatttgg gccgctcaac    480

ataaaccttg attttacttg gttctttaat ttgcgatccc tgatatatga gaaatataag    540

gatgacgaca gattcctaga aattgtgaat caaggtgaat ttacgatgac tggaccctgg    600

attgatgagg ataccccgga gctctattca caccctgtct ttttggaatt ctatgattct    660

ttagatgaga tggctaaact gacattccat gagtctatga catttgatgc aactcgcggt    720

gagaaatgga atcaaaatct acaaaaggtt ataaatagat atggcaatga ttataacatt    780

tttgtgaaag aggccgctgc aggaatcttt agatgtgaag ggaactaccc aaaaccaaat    840

catgatgaaa tcacaatcgg ttggaatcaa atggttcaaa gagtgagtac tgagagaaac    900

ctgactcaag atgtcagcaa gcaaaaacca tctattcatt tcatatgggg tcaacctgac    960

gaaacatcaa atgcgacaac accaaaacta atcaagattg caaaagcact ccaaaatatt   1020

tctggcgagt ctacatatat aagcgcattc agagcattgg gtatgcttat ggacttttct   1080

gagaacacag ctttatatga agcacacact agcaaactaa aaagtatggc aagacagaca   1140

tcgaaaagaa ttgatactaa actggaacca atcaaaatag gcacggcgac aatttattgg   1200

gaacagcagt ttaaactgga tactgaaata atgaatacaa aagacaaatc acatttgcta   1260

aaagattttc ttggcatagg gggtcacgtg caattttcaa aaaagaccat tgacgatttg   1320

gatactgaca aacctactat attagatttc aacaaaaagg aagtcattga tttttgcaaa   1380

ttccagtatg aaaatgtaaa gaaaatacta tccggagata ataatctaga gcgtatagga   1440

tgttatttag aagaatatgg tgcaaatatt gcatcatgtt caaaggatac atgggatcag   1500

attaaccaga tagggaagtc aaattactgg gcttgtatta aagatttttc agtcttgatg   1560

aaaaatatgt tggcagtttc tcaatataat aggcacaata cttttcgtgt agtgtgttgt   1620

gcaaacaata atctgtttgg gtttgtaatg ccttcttctg atattaaagc aaagcgatcc   1680

acacttgttt acttcttagc tgtgttgcat tctactcctc agaatgtgat gcaccacggt   1740

gcattgcatg cgacatttaa aactggttca aaatacctta gtatctctaa aggaatgcgt   1800

ttagataaag aacgatgtca acgcatagtt agttcaccgg gactttttat gttgactaca   1860

ttgatgtttg caggagacaa tccgacactc aatttgactg atgtcatgaa ttttacattc   1920

cacacttccc tgtctataac caaagctatg ctgtcattga cagaaccatc aagatatatg   1980

ataatgaatt cattagccat atccagtcat gttagagatt atatagcaga aaaatttggc   2040

ccttatacaa agaccagctt ctctgtagta atggcaaact tgattaaaag gggatgttat   2100

atggcatata atcaaagaga taaagtagac atgaggaata tctgcctaac agattatgaa   2160

ataactcaaa aaggtgtgag agataacaga gacctatcat caatctggtt tgaaggctat   2220

gtatcactaa aagaatatat taaccaaata tatctaccat tttacttcaa ttcaaaaggt   2280

ttgcatgaaa agcatcatgt tatgatagat ctggctaaga caatcttaga tatagaaagg   2340

gaccagagat taaatatccc aggaatatgg tctacaacac ctagaaaaca aactgcaaat   2400

ttaaatataa ctatctatgc agttgcaaaa aatctaataa tggacactgc tagacataat   2460

tatattagat cacggataga aaacacaaac aacttaaata gatcgatatg cactatttct   2520

acattcacca gctctaaatc atgtattaaa gtaggcgact ttgagaaaga aaaaagctca   2580

gcaacaaaaa aggctgcaga ttgcatgtca aaagagataa agaagtatac aattgcaaac   2640

ccagaatttg ttgatgaaga gttactaaat gcaactataa gacattcacg ctatgaagac   2700

ttaaaaaaag caatcccgaa ttatattgac attatgtcaa ctaaagtatt tgattctctg   2760

taccagaaaa taaaaaggaa ggagatagat gataaaccca ctgtgtatca tatactctct   2820

gctatgaaga atcacacaga ttttaagttt acattcttta acaaaggcca aaaaacagca   2880

aaggataggg aaatattcgt aggcgaattt gaggcaaaaa tgtgcttgta tttagtggag   2940

aggatatcta aagaacgctg taagttgaat ccagatgaga tgattagtga accaggcgat   3000

tctaaattga aaaaattaga agagcttgca gagtctgaaa tacgattcac agcagcaact   3060

atgaaacaga tcaaagaacg ctatttagca gaaatgggag aagcaagcca tatgatcgca   3120

tataaaccac attctgttaa gattgaaatc aatgcagaca tgtcaaaatg gagtgcccaa   3180

gatgttttat tcaaatattt ctggttgttt gcattagatc ccgcacttta tctgcaagaa   3240

aaagaaagga tattgtactt cctatgcaat tatatgcaaa aaaagctaat tctgcctgat   3300

gaaatgctct gtagcatcct tgaccaacgt atcaaacatg aggatgatat aatatatgaa   3360

atgaccaatg gcttatcgca aaattgggtc aatattaaac ggaactggct gcaggggaat   3420

ctcaattaca caagtagcta cctacattca tgttctatga atgtttataa ggatattcta   3480

aagagagcag ccactttact agaaggggaa gttttagtca attctatggt tcattctgat   3540

gacaatcaca cttcaatagt gatgatccaa gataaattag atgatgatat tgttattgaa   3600

ttttctgcaa aactatttga aaaaatatgt ctaacttttg gaaatcaagc aaatatgaag   3660

aagacatata taacaaattt cataaaggag ttcgtttcac tttttaatat ttatggtgag   3720

ccattttctg tttatggtcg ctttattttg acatctgttg gcgattgtgc ttttcttgga   3780

ccatatgagg atgttgccag taggttgtct gcaacgcaga cagcaattaa gcatggagca   3840

cctccatcac ttgcatggac tgctattgca ttaactcagt ggataacaca tagcacatat   3900

aacatgcttc caggtcaaat caatgatcct acttcatctt tacctagtca tgatagattt   3960

gagctgccta tagaattgtg tggcttaata aattcagaat tacccactat agctatagca   4020

ggtttggaag cagataatct aagttattta gttaggttat caaaaagaat gtcccctata   4080

catctttgcc gtgaaccaat ccagcatcaa tatgagaata tacatacatg ggatataagt   4140

aaactgacac aatgtgatat tttcagactt aagcttttaa gatacatgac gttagactca   4200

actatgtcat ctgatgatgg aatgggcgaa actagtgaaa tgagatctag gtctcttctg   4260

acaccaagaa aattcactac tgcaagttcg ttatctagat tgcattcata tgctgattat   4320

caaaaaacaa tacaagacca acagaaaatt gaagaattat ttgaatattt tatagccaac   4380

cctcaactat tggttacaaa aggtgagact tgtgaagagt tctgtatgtc tgtattgttc   4440

agatacaaca gtcgtaaatt taaagaatca ttgtctattc aaaacccagc tcagctcttc   4500

atagaacaag tattgtttgc aaataaacca atgatagact atacaagtat tcatgatagg   4560

ttgtttggta tacaagatga cccaaatata aatgatgcta catgtattat tggcaagaag   4620

acttttgttg aaacatatca gcaaataaaa attgatgtag aaaaatttac acttgatgta   4680

gaggatataa agacgatata tagcttctgt ataatgaacg accctatatt agttgcttgt   4740

gcaaacaact tgttaatttc aatacaggga gtggagatgc aacgattggg tatgacatgc   4800

tgttatatgc cggagattaa gagccttaaa gtaatttatc atagtcctgc tctcgtatta   4860

cgtgcttatg taacagataa ctatgagcaa aaagggatgg agccagatga aatgcggaga   4920

gatatatatc atttagaaga atttatagag aagacaaaat tgaggacaaa tatgcaaggg   4980

agaattgcaa ataatgaaat taagttaatg aagcgagatt tgaaatttga agtgcaggaa   5040

ttgactaaat tctatcagat ctgttatgaa tatgtgaaat caacagaaca caaaattaaa   5100

atattcatcc ttccaaaaaa ggcttacact cccattgatt tctgctcatt agtaacaggt   5160

aatctgatat cagacaacaa atggatggtt gttcactatt taaaacaaat aactgtccca   5220

gcaaagaagg cacaaatagc cacatctata gatctggaaa tacaaatagc ctacgaatgt   5280

ttcaggctaa ttgcacattt tgctgatatg ttcctaaatg atgactccaa aaaagcttat   5340

attaatgcaa ttattaacac atatacatac aaggatgttc aagtatccag tctctacaag   5400

aaaatcaaaa attcgagact acgttcaaaa attataccat tattatatca cctgggcgat   5460

ttgcaacaaa tagacgttga cagatttgat gcagaaaaag cagaagagca gatcacatgg   5520

aataactggc aaacatctcg agaatttact actggtccaa ttgatctatc aatcaaaggt   5580

tatggacggt caataaggat cgtaggtgag gacaacaagc ttacagctgc agaaatgcaa   5640

ttgtcaagag tgagaagtga tatagtatca aggcatggac aggctttatt gaacaaacct   5700

catgggctaa aattagagaa aatggaacca gtgactgatc taaatcctaa attatggtat   5760

attgcatacc aattgcgtga gaaaaagcgg tatcactatg gggtctttag tacatcttat   5820

atagaagagc ataactcaag gatagaagca tctcggatac gtaagactaa taaatggata   5880

ccagtttgcc ctattgctat atcaaaacaa tcatctgatg gaaagcctag tcttgcaaaa   5940

atccctatgt taaatattgg ggagattaaa tttacaaaac tacagattgc agtagatgat   6000

catgcaatga ttaggaaagc cccatttagt aagatggtgt tctttgatgg cccacccata   6060

cagagcggtg gcattgacat tggaaagctt atgaagaacc aaaatattct caatttgagg   6120

ttagataata tacagagtat aacattatta gatttgtgcc gcatattttc atgccgaggg   6180

tctaaagtgg atcaagatgc atttgaattc ttatctgatg aacctttgga tgaagatgtt   6240

attgatgaat tagatagctc acctgcatta gtggtatctt acacaaagaa atcaaccaaa   6300

tccaatagtt tcaaaaatgt tatagttaga gcattgataa gagaatgtga tatatttgaa   6360

gatataatgg acataacaga cgatggattc acatctgata gcaatctaga ggtgttagaa   6420

aacttaacat ggattttaaa tatgctcgca acaaatcagt ggtctacaga actgttagca   6480

tgcatacaca tgtgtttata tcgcaatgag atggatcata tctatcacaa ttttcaagtt   6540

ccagaaatat ttgtcgacaa tccaatctca ttaaatgtaa agtgggatga agtaattatg   6600

ttcttaaaca tactgcgaga cagagattac aaatttgagc catgggtgtc tatactgaat   6660

cattccttaa ctaaagctat agagtatgct tacaaaaaga tggaagagga gaggaagcag   6720

aaatcaacag gcatcaacaa attcttaaag ggtaaaaaaa tgggtggcag atcaaagttt   6780

gatttccagt agcttgatct taaataatac ataatctttg ccccaaatct gtattatata   6840

aataattcta aagtagtttc atgtaattag gggcacacta ct                      6882


<210>  4
<211>  839
<212>  RNA
<213>  Schmallenberg virus

<400>  4
aguaguguuc uccacuuauu aacuaucuua acagaagccu ugcaguauaa uggugugcaa     60

uacauagaca uauugcacgg aaauugaaga ucugugauga agagguuuag auguugauac    120

cgaauugcug caagaagguu cuagcagcag gagagaaucc agauuuggcc caggcaagcu    180

guccaacaga auuaaaagca gcuuuuauuu cuguuauuuu cugagucauc cauucuucag    240

cagucauugu uccauagcgu uggcggagga cuuuuuucau aaaauuuaca uccauauugu    300

ccuugaggac ccuaugcauu ucaauaacua guggauagaa gucaaaagca ucaaggaaca    360

uuucggcccc aggugcaaau ccaagauaca uuguauaacc aucggcccag gugcaucccu    420

uaaccucagc aaggggcaug acaaucugag cacuagcuuc agcuaguuug aggacacuag    480

ccuugcaugu aucagcaauc caacgugcua gauauccuga cauccuguga aguguaaugg    540

cauugucugg cacaggauuu gagacauauu ggggaaaaug guuauuaacc acuguaaauu    600

ugaccccacc aaaaguaaga ucgacacuug guugugccgu cuuauguagg accaucuugg    660

ccuucuucug guugaggaag aagacucuag caacaccgaa guugaguugu ugcccauacu    720

uaccaauaaa ugccacauac ccgaccuccg gguuaaaugu agcugcauuc cguuguggua    780

caucuucaaa aaugaauugg cuugacauau uucuguaguu aauaguggag cucacuacu     839


<210>  5
<211>  4373
<212>  RNA
<213>  Schmallenberg virus

<400>  5
aguaguguuc uaccacauga aaaacuucuc agcugaauaa uuacauauau auguguaacc     60

acauauauau guuguuauuu guuuaucuuu uauuguuuuu auuuauucau uuauaauugc    120

ucauuguuau aaggcuuauc acuuaaauuu auuuuccauu ugguauauuc ucucauugua    180

uuccaauaaa ccuuuuagcc guuugcacag ugguauuaau auguauagaa acagaauuag    240

cauaaucaaa gagauuauua uauauauugu cagucuccaa uagaaagaua gguugccaaa    300

uagaggcuga aauauuacgc uaaucccuuc uuuauaaacu cugcaaagcc auguagaaca    360

cuuuuuauca uguugcucga uguaagaugu uucaucuaag gaauucaaaa caauuuuugg    420

uugauuuuua gauauugaag guuuugugua agcagaagcu gagcacacac uuacugaaac    480

ugucucuguu gcuagugggc aguuuaacuu aauggaauac ucgcucugca ucggaucgac    540

ugcuauuauu uuaauguaug uaucgcaguu acuuuuuauu gaacaacucc cgaugguauu    600

gguacucaau uugagugcgc aagccauucc uucagggcag ccauaacaac caccacaccu    660

gaucucaucu auugugacug uugcuugugu ugaauaugca uuguagucaa aauccccuaa    720

cauaauuuua uaauugauug uacccacgcu ugaaacuuuu uuaugcacuu ccauaugacu    780

gguagaagca auaguuaaug uauuaucuug uuccaagaga agacaagacu gauaugaguu    840

aucaaagcau cuucgaagga ugacaucuuu acgauugaau gcauggcaaa cauaaucaaa    900

uuuugggguu cccgauccaa ugaucccuuc agaauauaau uggacugagc cacauuucuu    960

ugcugucgaa ccuaagucau ugauaucucc aacauaaacu uucccauucu ugacugcaau   1020

uauauuuggc auagagucca uuugaaucgu uuggauaucu aauuguaucc ugucgcuaau   1080

uaaagguugg agaacaucaa cgguacugca gaaugauuca ugggccaugg uuauacaaac   1140

uucaacaucc uuuuguucaa uacuagacuu cuuguauauc uuauauucag gccuuauuau   1200

gucuugacau gacccauaua aacaaccauc auuuauugcc aagcaacccc auucuucaca   1260

gccccaauua cuugaucuuu ccuuugagaa ugugacccaa ccaucuugau gugguauugg   1320

gcuugggcac uucccgguac auaccucuuc gugcuuggca uuuauuccaa uugugggucc   1380

uguuucauau agaaaucgau acgaugcuuu auuuauuacu cuucugacau agauaauaau   1440

ggaaaagagg cuuucuccau uuggcauggc aauauuaauc ccugcugaua aaccauuaau   1500

ugcagggaug ugcgacucga uauaacuauu ucuaauacca uuugauaccu uguccccauu   1560

caaugucauu guuuuguauu gaggaauuau ugcuggaagg uuuuuuaaug guuuaaagua   1620

gugcauaguu aaaucauuug caauaucuga cugaagcgcu gcuauguagu uuucaauauc   1680

uggaugauua auagauuuag guguuaauuu auuucgauaa cuuguauccc auacuauauc   1740

ugaacaacua cuggaucuga augcauaacg caaguccagg caauuugcug auaaacagua   1800

caguguuaua ucguuaguuu ucgaaugggc uuuagcugaa acauaguaaa auaagccauu   1860

ugagcauucu gcaauuugcc auugaugacc ccuuacauua caugauccaa aucucuucac   1920

guugcaugau gguauuccag uacuauaugg cgauucugaa uaagucauau cacuuacuuu   1980

gcauauuuuu guaguuauug uucuuucugc ugguucaaac aucucuaggc aauguguguc   2040

acugcugcag gcuuguugcu ggucucuauu auguuuguau accccuaaag auggccacuu   2100

auacaucuua gauuugcaug auauauaauc uccugggugu gugacaccac guggugagua   2160

gcauaccacu uuuuguggug auuugcauac caguauuggu guuggaccug gaucuuuuug   2220

auccaaguuu cugugggcuc cuuuuaucaa agauaaugua guuaauguuu gagggguuuu   2280

uucuauuguc acguuugcac caaggauaaa aucaacaaau uccagaaauc cuuuaaguug   2340

uaaauuugac ugcgauuuag gagaaagcuu accuuguaug uggcguaaag cuugguaguc   2400

uuuuguuugu uugauuugau caagcaagac ucgaccuaau ccagggacua uauaucucau   2460

uauauucaau auuauuuuca ugucaugcuc aaagcgaucu ggaugaccau cauaauauau   2520

ugacauuucc cuagcguggu cugucuuggu ugaugugcac auuugcauag acuccaagca   2580

ucuacauaua uguuuaugag gauucguauu gcacacuccu aaggugaaac uucgggccag   2640

ugcuuuccau uguauguuac uugcugaauu gauagugaaa auaucaugca cuuggagagg   2700

gcacaacugu gauuuuauau acucauaaua aacuugaguc ucaauaacac uagauucgga   2760

aauaaaccua ucuaugacau uacaguucaa guuuaaacuu uuuauuaauu cuuguucguc   2820

uacugaagca ucugaaauua uuucauugau uacaacuggu gagcuuguuu uauuuugaua   2880

aaaugccaug cacuuacuca ggugcucuau uguaagcuga guugauugaa uguuuuugca   2940

guuaauacua guuucuugcg ucauuacaau uguugggacu aacagaagca uaaagauuau   3000

caacccgguc cuauuauaac uugauucaaa uuugaacaga cauuucucag aggcucugug   3060

aauuguuaag cccuuguuuu cugcgcauac acaacuuagg cacuuguuug uaaaguuguc   3120

cauuaucuuc aauccacguc guucauguac cauaccacaa aagcugcagu ugcaguacaa   3180

gauauacuuu gcugccuuuu uaaguaauau uaacacaauu augcauguac aggaauauau   3240

aaagcuauau gugucaucaa uugucaagcu uuugauauua gcuagcucuc uuuuacaugu   3300

aauauacucg ucuggcaguu uuucuauauc gauacauuga cucgauauag gugugauaaa   3360

ugagaaaaau aucagugaug uuaucacaca uagcacuaua uuggauauuu uacuuuuaca   3420

caauuuccuu guuuucggca augcuuuaua gccagaacaa uuguuacaca ugcgaugcaa   3480

uuugagugau ucagugguag uguaaaucau uccacagaug caugucgaug ggcaauuugu   3540

aaagggaugu acugcuaaca ggcaauuuuu acacaauuua aaauauuugu uguacauaua   3600

agcauauaau uucacaaaug gauaaaauau aggaaugaac acauauacua uauauguuuu   3660

cgucaauauc aucaucauga cagacccaac uaauaugaaa guuacuagca guauuaauuc   3720

aagauucgua caaaaugauu cgaucaucaa uuccggcagg auugauccuu uaaaauagcg   3780

ggugcaugac uuauggguau ggaaacaugc augaaaauua aguguuuuua auccacaugu   3840

uaccucaaug gauucgcaug uguuuuccaa aggaaucuca auuuuguuuu uaaaccaacc   3900

ugauacaugc auugugcccg agauucggua gugguuaauu cgauaugaau ucaauauaac   3960

uucgccagua ucuuuauuca gugcuauuuc gcauucaacu cugcauguau gcauuuuagg   4020

gauuaaugug ccaguauuau cuauaucuaa uaucauaaag gaaccguggu caucauaaau   4080

uggauugcaa gaaugccaau ccuucaccug auauaaacga uaauauuuua uuacagcagc   4140

caaccgaucu ccugauuuau aauguucagc auuugauuua augauagaua ugucgucuuu   4200

cacacagcau ucugaaacga ccuuugaugu guuaacaguu uuaaccaguu cgccauucag   4260

gaagcaccua gacccucuag ugccuuccuu aagugggagu gcaaaagcua aacaggcuaa   4320

guuagauauc aagacaaugu ugagaagcau uuugauugug guaguucacu acu          4373


<210>  6
<211>  6882
<212>  RNA
<213>  Schmallenberg virus

<400>  6
aguagugugc cccuaauuac augaaacuac uuuagaauua uuuauauaau acagauuugg     60

ggcaaagauu auguauuauu uaagaucaag cuacuggaaa ucaaacuuug aucugccacc    120

cauuuuuuua cccuuuaaga auuuguugau gccuguugau uucugcuucc ucuccucuuc    180

caucuuuuug uaagcauacu cuauagcuuu aguuaaggaa ugauucagua uagacaccca    240

uggcucaaau uuguaaucuc ugucucgcag uauguuuaag aacauaauua cuucauccca    300

cuuuacauuu aaugagauug gauugucgac aaauauuucu ggaacuugaa aauugugaua    360

gauaugaucc aucucauugc gauauaaaca cauguguaug caugcuaaca guucuguaga    420

ccacugauuu guugcgagca uauuuaaaau ccauguuaag uuuucuaaca ccucuagauu    480

gcuaucagau gugaauccau cgucuguuau guccauuaua ucuucaaaua uaucacauuc    540

ucuuaucaau gcucuaacua uaacauuuuu gaaacuauug gauuugguug auuucuuugu    600

guaagauacc acuaaugcag gugagcuauc uaauucauca auaacaucuu cauccaaagg    660

uucaucagau aagaauucaa augcaucuug auccacuuua gacccucggc augaaaauau    720

gcggcacaaa ucuaauaaug uuauacucug uauauuaucu aaccucaaau ugagaauauu    780

uugguucuuc auaagcuuuc caaugucaau gccaccgcuc uguaugggug ggccaucaaa    840

gaacaccauc uuacuaaaug gggcuuuccu aaucauugca ugaucaucua cugcaaucug    900

uaguuuugua aauuuaaucu ccccaauauu uaacauaggg auuuuugcaa gacuaggcuu    960

uccaucagau gauuguuuug auauagcaau agggcaaacu gguauccauu uauuagucuu   1020

acguauccga gaugcuucua uccuugaguu augcucuucu auauaagaug uacuaaagac   1080

cccauaguga uaccgcuuuu ucucacgcaa uugguaugca auauaccaua auuuaggauu   1140

uagaucaguc acugguucca uuuucucuaa uuuuagccca ugagguuugu ucaauaaagc   1200

cuguccaugc cuugauacua uaucacuucu cacucuugac aauugcauuu cugcagcugu   1260

aagcuuguug uccucaccua cgauccuuau ugaccgucca uaaccuuuga uugauagauc   1320

aauuggacca guaguaaauu cucgagaugu uugccaguua uuccauguga ucugcucuuc   1380

ugcuuuuucu gcaucaaauc ugucaacguc uauuuguugc aaaucgccca ggugauauaa   1440

uaaugguaua auuuuugaac guagucucga auuuuugauu uucuuguaga gacuggauac   1500

uugaacaucc uuguauguau auguguuaau aauugcauua auauaagcuu uuuuggaguc   1560

aucauuuagg aacauaucag caaaaugugc aauuagccug aaacauucgu aggcuauuug   1620

uauuuccaga ucuauagaug uggcuauuug ugccuucuuu gcugggacag uuauuuguuu   1680

uaaauaguga acaaccaucc auuuguuguc ugauaucaga uuaccuguua cuaaugagca   1740

gaaaucaaug ggaguguaag ccuuuuuugg aaggaugaau auuuuaauuu uguguucugu   1800

ugauuucaca uauucauaac agaucugaua gaauuuaguc aauuccugca cuucaaauuu   1860

caaaucucgc uucauuaacu uaauuucauu auuugcaauu cucccuugca uauuuguccu   1920

caauuuuguc uucucuauaa auucuucuaa augauauaua ucucuccgca uuucaucugg   1980

cuccaucccu uuuugcucau aguuaucugu uacauaagca cguaauacga gagcaggacu   2040

augauaaauu acuuuaaggc ucuuaaucuc cggcauauaa cagcauguca uacccaaucg   2100

uugcaucucc acucccugua uugaaauuaa caaguuguuu gcacaagcaa cuaauauagg   2160

gucguucauu auacagaagc uauauaucgu cuuuauaucc ucuacaucaa guguaaauuu   2220

uucuacauca auuuuuauuu gcugauaugu uucaacaaaa gucuucuugc caauaauaca   2280

uguagcauca uuuauauuug ggucaucuug uauaccaaac aaccuaucau gaauacuugu   2340

auagucuauc auugguuuau uugcaaacaa uacuuguucu augaagagcu gagcuggguu   2400

uugaauagac aaugauucuu uaaauuuacg acuguuguau cugaacaaua cagacauaca   2460

gaacucuuca caagucucac cuuuuguaac caauaguuga ggguuggcua uaaaauauuc   2520

aaauaauucu ucaauuuucu guuggucuug uauuguuuuu ugauaaucag cauaugaaug   2580

caaucuagau aacgaacuug caguagugaa uuuucuuggu gucagaagag accuagaucu   2640

cauuucacua guuucgccca uuccaucauc agaugacaua guugagucua acgucaugua   2700

ucuuaaaagc uuaagucuga aaauaucaca uugugucagu uuacuuauau cccauguaug   2760

uauauucuca uauugaugcu ggauugguuc acggcaaaga uguauagggg acauucuuuu   2820

ugauaaccua acuaaauaac uuagauuauc ugcuuccaaa ccugcuauag cuauaguggg   2880

uaauucugaa uuuauuaagc cacacaauuc uauaggcagc ucaaaucuau caugacuagg   2940

uaaagaugaa guaggaucau ugauuugacc uggaagcaug uuauaugugc uauguguuau   3000

ccacugaguu aaugcaauag caguccaugc aagugaugga ggugcuccau gcuuaauugc   3060

ugucugcguu gcagacaacc uacuggcaac auccucauau gguccaagaa aagcacaauc   3120

gccaacagau gucaaaauaa agcgaccaua aacagaaaau ggcucaccau aaauauuaaa   3180

aagugaaacg aacuccuuua ugaaauuugu uauauauguc uucuucauau uugcuugauu   3240

uccaaaaguu agacauauuu uuucaaauag uuuugcagaa aauucaauaa caauaucauc   3300

aucuaauuua ucuuggauca ucacuauuga agugugauug ucaucagaau gaaccauaga   3360

auugacuaaa acuuccccuu cuaguaaagu ggcugcucuc uuuagaauau ccuuauaaac   3420

auucauagaa caugaaugua gguagcuacu uguguaauug agauuccccu gcagccaguu   3480

ccguuuaaua uugacccaau uuugcgauaa gccauugguc auuucauaua uuauaucauc   3540

cucauguuug auacguuggu caaggaugcu acagagcauu ucaucaggca gaauuagcuu   3600

uuuuugcaua uaauugcaua ggaaguacaa uauccuuucu uuuucuugca gauaaagugc   3660

gggaucuaau gcaaacaacc agaaauauuu gaauaaaaca ucuugggcac uccauuuuga   3720

caugucugca uugauuucaa ucuuaacaga augugguuua uaugcgauca uauggcuugc   3780

uucucccauu ucugcuaaau agcguucuuu gaucuguuuc auaguugcug cugugaaucg   3840

uauuucagac ucugcaagcu cuucuaauuu uuucaauuua gaaucgccug guucacuaau   3900

caucucaucu ggauucaacu uacagcguuc uuuagauauc cucuccacua aauacaagca   3960

cauuuuugcc ucaaauucgc cuacgaauau uucccuaucc uuugcuguuu uuuggccuuu   4020

guuaaagaau guaaacuuaa aaucugugug auucuucaua gcagagagua uaugauacac   4080

aguggguuua ucaucuaucu ccuuccuuuu uauuuucugg uacagagaau caaauacuuu   4140

aguugacaua augucaauau aauucgggau ugcuuuuuuu aagucuucau agcgugaaug   4200

ucuuauaguu gcauuuagua acucuucauc aacaaauucu ggguuugcaa uuguauacuu   4260

cuuuaucucu uuugacaugc aaucugcagc cuuuuuuguu gcugagcuuu uuucuuucuc   4320

aaagucgccu acuuuaauac augauuuaga gcuggugaau guagaaauag ugcauaucga   4380

ucuauuuaag uuguuugugu uuucuauccg ugaucuaaua uaauuauguc uagcaguguc   4440

cauuauuaga uuuuuugcaa cugcauagau aguuauauuu aaauuugcag uuuguuuucu   4500

agguguugua gaccauauuc cugggauauu uaaucucugg ucccuuucua uaucuaagau   4560

ugucuuagcc agaucuauca uaacaugaug cuuuucaugc aaaccuuuug aauugaagua   4620

aaaugguaga uauauuuggu uaauauauuc uuuuagugau acauagccuu caaaccagau   4680

ugaugauagg ucucuguuau cucucacacc uuuuugaguu auuucauaau cuguuaggca   4740

gauauuccuc augucuacuu uaucucuuug auuauaugcc auauaacauc cccuuuuaau   4800

caaguuugcc auuacuacag agaagcuggu cuuuguauaa gggccaaauu uuucugcuau   4860

auaaucucua acaugacugg auauggcuaa ugaauucauu aucauauauc uugaugguuc   4920

ugucaaugac agcauagcuu ugguuauaga cagggaagug uggaauguaa aauucaugac   4980

aucagucaaa uugagugucg gauugucucc ugcaaacauc aauguaguca acauaaaaag   5040

ucccggugaa cuaacuaugc guugacaucg uucuuuaucu aaacgcauuc cuuuagagau   5100

acuaagguau uuugaaccag uuuuaaaugu cgcaugcaau gcaccguggu gcaucacauu   5160

cugaggagua gaaugcaaca cagcuaagaa guaaacaagu guggaucgcu uugcuuuaau   5220

aucagaagaa ggcauuacaa acccaaacag auuauuguuu gcacaacaca cuacacgaaa   5280

aguauugugc cuauuauauu gagaaacugc caacauauuu uucaucaaga cugaaaaauc   5340

uuuaauacaa gcccaguaau uugacuuccc uaucugguua aucugauccc auguauccuu   5400

ugaacaugau gcaauauuug caccauauuc uucuaaauaa cauccuauac gcucuagauu   5460

auuaucuccg gauaguauuu ucuuuacauu uucauacugg aauuugcaaa aaucaaugac   5520

uuccuuuuug uugaaaucua auauaguagg uuugucagua uccaaaucgu caauggucuu   5580

uuuugaaaau ugcacgugac ccccuaugcc aagaaaaucu uuuagcaaau gugauuuguc   5640

uuuuguauuc auuauuucag uauccaguuu aaacugcugu ucccaauaaa uugucgccgu   5700

gccuauuuug auugguucca guuuaguauc aauucuuuuc gaugucuguc uugccauacu   5760

uuuuaguuug cuagugugug cuucauauaa agcuguguuc ucagaaaagu ccauaagcau   5820

acccaaugcu cugaaugcgc uuauauaugu agacucgcca gaaauauuuu ggagugcuuu   5880

ugcaaucuug auuaguuuug guguugucgc auuugauguu ucgucagguu gaccccauau   5940

gaaaugaaua gaugguuuuu gcuugcugac aucuugaguc agguuucucu caguacucac   6000

ucuuugaacc auuugauucc aaccgauugu gauuucauca ugauuugguu uuggguaguu   6060

cccuucacau cuaaagauuc cugcagcggc cucuuucaca aaaauguuau aaucauugcc   6120

auaucuauuu auaaccuuuu guagauuuug auuccauuuc ucaccgcgag uugcaucaaa   6180

ugucauagac ucauggaaug ucaguuuagc caucucaucu aaagaaucau agaauuccaa   6240

aaagacaggg ugugaauaga gcuccggggu auccucauca auccaggguc cagucaucgu   6300

aaauucaccu ugauucacaa uuucuaggaa ucugucguca uccuuauauu ucucauauau   6360

cagggaucgc aaauuaaaga accaaguaaa aucaagguuu auguugagcg gcccaaauau   6420

uuccaagaau ugauuugaau uaacauggau aguaucucgc agagggucag cacggaugau   6480

cacaacuuca aaaucaaacg gcaauucuga caaugcgucu ccaaagaucu ggguguacuu   6540

uucauaaguu uuuugaccau augcaugauc aguugauacu uuauagucaa ugauauaaag   6600

cuugccauug ugaaugauaa aauugucugg uguacaauug cgaauguuga aagcagugcc   6660

agcuggcaga aauucaagaa guaugucgua agcuggaaca uccugccgga auucgauauc   6720

cagguaauaa cauaccucuc uaccaaagua gucaugucua gccaugagaa gaucagcaac   6780

aaugucuuug gcuucuucag cacuucgaca cugguugauc cuaucucuaa aaauguuaau   6840

cuuguauguc uccauaguga uuguaauuag ggguacacua cu                      6882


<210>  7
<211>  839
<212>  DNA
<213>  Schmallenberg virus

<400>  7
agtagtgaac tccactatta actacagaaa tatgtcaagc caattcattt ttgaagatgt     60

accacaacgg aatgcagcta catttaaccc ggaggtcggg tatgtggcat ttattggtaa    120

gtatgggcaa caactcaact tcggtgttgc tagagtcttc ttcctcaacc agaagaaggc    180

caagatggtc ctacataaga cggcacaacc aagtgtcgat cttacttttg gtggggtcaa    240

atttacagtg gttaataacc attttcccca atatgtctca aatcctgtgc cagacaatgc    300

cattacactt cacaggatgt caggatatct agcacgttgg attgctgata catgcaaggc    360

tagtgtcctc aaactagctg aagctagtgc tcagattgtc atgccccttg ctgaggttaa    420

gggatgcacc tgggccgatg gttatacaat gtatcttgga tttgcacctg gggccgaaat    480

gttccttgat gcttttgact tctatccact agttattgaa atgcataggg tcctcaagga    540

caatatggat gtaaatttta tgaaaaaagt cctccgccaa cgctatggaa caatgactgc    600

tgaagaatgg atgactcaga aaataacaga aataaaagct gcttttaatt ctgttggaca    660

gcttgcctgg gccaaatctg gattctctcc tgctgctaga accttcttgc agcaattcgg    720

tatcaacatc taaacctctt catcacagat cttcaatttc cgtgcaatat gtctatgtat    780

tgcacaccat tatactgcaa ggcttctgtt aagatagtta ataagtggag aacactact     839


<210>  8
<211>  839
<212>  RNA
<213>  Schmallenberg virus

<400>  8
aguaguguuc uccacuuauu aacuaucuua acagaagccu ugcaguauaa uggugugcaa     60

uacauagaca uauugcacgg aaauugaaga ucugugauga agagguuuag auguugauac    120

cgaauugcug caagaagguu cuagcagcag gagagaaucc agauuuggcc caggcaagcu    180

guccaacaga auuaaaagca gcuuuuauuu cuguuauuuu cugagucauc cauucuucag    240

cagucauugu uccauagcgu uggcggagga cuuuuuucau aaaauuuaca uccauauugu    300

ccuugaggac ccuaugcauu ucaauaacua guggauagaa gucaaaagca ucaaggaaca    360

uuucggcccc aggugcaaau ccaagauaca uuguauaacc aucggcccag gugcaucccu    420

uaaccucagc aaggggcaug acaaucugag cacuagcuuc agcuaguuug aggacacuag    480

ccuugcaugu aucagcaauc caacgugcua gauauccuga cauccuguga aguguaaugg    540

cauugucugg cacaggauuu gagacauauu ggggaaaaug guuauuaacc acuguaaauu    600

ugaccccacc aaaaguaaga ucgacacuug guugugccgu cuuauguagg accaucuugg    660

ccuucuucug guugaggaag aagacucuag caacaccgaa guugaguugu ugcccauacu    720

uaccaauaaa ugccacauac ccgaccuccg gguuaaaugu agcugcauuc cguuguggua    780

caucuucaaa aaugaauugg cuugacauau uucuguaguu aauaguggag uucacuacu     839


