                         SEQUENCE LISTING

<110>  Universidade do Porto
 
<120>  HCV HOMOLOG GENE FRAGMENTS, CELL-LINES AND APPLICATIONS THEREOF

<130>  PPI 47139/13

<150>  PT 106235
<151>  2012-04-02

<160>  64    

<170>  PatentIn version 3.5

<210>  1
<211>  21
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  1
gtgaccgctc ggaagtcttc c                                                 21


<210>  2
<211>  21
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  2
cgaggttccc gtccctcttg g                                                 21


<210>  3
<211>  22
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  3
cgaccgctcg gaagtcttcc ta                                                22


<210>  4
<211>  19
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  4
tttggaaaag gccagggaa                                                    19


<210>  5
<211>  26
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  5
ttttgtttcc gaagccaata catcca                                            26


<210>  6
<211>  30
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  6
ccaccaaaac cgtccctggc cttttccaaa                                        30


<210>  7
<211>  32
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  7
gctggggact tgtgccttca ggggacatgt gg                                     32


<210>  8
<211>  18
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  8
agcctccgtg aaagcttg                                                     18


<210>  9
<211>  36
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  9
caagctttca cggaggctat gaccaggaat tccgcc                                 36


<210>  10
<211>  33
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  10
aatcaaagca gcgggtatca tacgggatcc cca                                    33


<210>  11
<211>  33
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  11
aatcaaagca gcgggtatca tacgggatcc cca                                    33


<210>  12
<211>  27
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  12
gatcccgtat gatacccgct gctttga                                           27


<210>  13
<211>  31
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  13
tcaaagcagc gggtatcata cgggatcccc a                                      31


<210>  14
<211>  32
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  14
gctggggact tgtgccttca ggggacatgt gg                                     32


<210>  15
<211>  33
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  15
agctttcacg gaggctatga ccaggtactc agc                                    33


<210>  16
<211>  34
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  16
agctttcacg gaggctatga ccagatattc agca                                   34


<210>  17
<211>  21
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  17
tatgataccc gcttgctttg a                                                 21


<210>  18
<211>  26
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  18
gtagagtcga agcaacgggt aacata                                            26


<210>  19
<211>  8
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  19

Ser Thr Asn Pro Lys Pro Gln Arg 
1               5               


<210>  20
<211>  7
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  20

Ser Gln Pro Arg Gly Arg Arg 
1               5           


<210>  21
<211>  27
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  21

Thr Trp Ala Gln Pro Gly Tyr Pro Trp Pro Leu Tyr Gly Asn Glu Gly 
1               5                   10                  15      


Met Gly Trp Ala Gly Trp Leu Leu Ser Pro Arg 
            20                  25          


<210>  22
<211>  11
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  22

Asn Ser Ser Ile Pro Thr Thr Thr Ile Arg Arg 
1               5                   10      


<210>  23
<211>  19
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  23

Val Ala Ser Ser Thr Gln Ser Leu Val Ser Trp Leu Ser Gln Gly Pro 
1               5                   10                  15      


Ser Gln Lys 
            


<210>  24
<211>  6
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  24

Ser Ile Glu Glu Phe Arg 
1               5       


<210>  25
<211>  14
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  25

Lys Val Ala Gly Gly His Tyr Val Gln Met Ala Phe Met Lys 
1               5                   10                  


<210>  26
<211>  24
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  26

Gly Pro Ile Thr Gln Met Tyr Thr Asn Val Asp Gln Asp Leu Val Gly 
1               5                   10                  15      


Trp Pro Ala Pro Pro Gly Ala Arg 
            20                  


<210>  27
<211>  15
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  27

Ala Val Asp Phe Ile Pro Val Glu Ser Leu Glu Thr Thr Met Arg 
1               5                   10                  15  


<210>  28
<211>  24
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  28

Asp Val Trp Asp Trp Ile Cys Thr Val Leu Ser Asp Phe Lys Thr Trp 
1               5                   10                  15      


Leu Gln Ser Lys Leu Leu Pro Arg 
            20                  


<210>  29
<211>  14
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  29

Ile Pro Gly Ile Pro Phe Ile Ser Cys Gln Ala Gly Tyr Arg 
1               5                   10                  


<210>  30
<211>  10
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  30

Asn Gly Ser Met Arg Leu Ala Gly Pro Arg 
1               5                   10  


<210>  31
<211>  20
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  31

Gly Ser Pro Pro Ser Leu Ala Ser Ser Ser Ala Ser Gln Leu Ser Ala 
1               5                   10                  15      


Pro Ser Leu Lys 
            20  


<210>  32
<211>  9
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  32

Val Glu Phe Leu Val Asn Thr Trp Lys 
1               5                   


<210>  33
<211>  9
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  33

Ala Ala Ile Arg Ser Leu Thr Gln Arg 
1               5                   


<210>  34
<211>  8
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  34

Ala Phe Thr Glu Ala Met Thr Arg 
1               5               


<210>  35
<211>  7
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  35

Ser Gln Pro Arg Gly Arg Arg 
1               5           


<210>  36
<211>  20
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  36

Cys Asp Glu Leu Ala Gly Lys Leu Lys Ser Leu Gly Leu Asn Ala Val 
1               5                   10                  15      


Ala Phe Tyr Arg 
            20  


<210>  37
<211>  7
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  37

Gly Arg Leu Gly Val Tyr Arg 
1               5           


<210>  38
<211>  17
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  38

Ala Lys Ala Pro Pro Pro Ser Trp Asp Ala Met Trp Lys Cys Leu Ala 
1               5                   10                  15      


Arg 
    


<210>  39
<211>  10
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  39

Asn Gly Ser Met Arg Ile Ser Gly Ser Arg 
1               5                   10  


<210>  40
<211>  14
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  40

Ile Val Gly Pro Lys Met Cys Ser Asn Val Trp Asn Asn Arg 
1               5                   10                  


<210>  41
<211>  16
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  41

Val Gly Asp Phe His Tyr Val Thr Gly Met Thr Thr Asp Asn Val Lys 
1               5                   10                  15      


<210>  42
<211>  20
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  42

Gly Ser Pro Pro Ser Leu Ala Ser Ser Ser Ala Ser Gln Leu Ser Ala 
1               5                   10                  15      


Pro Ser Leu Lys 
            20  


<210>  43
<211>  17
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  43

Ser Asp Leu Glu Pro Ser Ile Pro Ser Glu Tyr Met Leu Pro Lys Lys 
1               5                   10                  15      


Arg 
    


<210>  44
<211>  7
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  44

Ser Ala Ser Leu Arg Gln Lys 
1               5           


<210>  45
<211>  17
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  45

Leu Leu Thr Val Glu Glu Ala Cys Ala Leu Thr Pro Pro His Ser Ala 
1               5                   10                  15      


Lys 
    


<210>  46
<211>  8
<212>  PRT
<213>  Oryctolagus cuniculus

<400>  46

Met Ala Leu Tyr Asp Val Thr Arg 
1               5               


<210>  47
<211>  14
<212>  PRT
<213>  Lepus europaeus

<400>  47

Gly Ser Arg Pro Thr Trp Gly Pro Ser Asp Pro Arg His Arg 
1               5                   10                  


<210>  48
<211>  16
<212>  PRT
<213>  Lepus europaeus

<400>  48

Leu Trp His Tyr Pro Cys Thr Val Asn Phe Thr Ile Phe Lys Val Arg 
1               5                   10                  15      


<210>  49
<211>  14
<212>  PRT
<213>  Lepus europaeus

<400>  49

Leu Gly Lys Glu Val Leu Leu Gly Pro Ala Asp Asp Tyr Arg 
1               5                   10                  


<210>  50
<211>  10
<212>  PRT
<213>  Lepus europaeus

<400>  50

Asn Gly Ser Met Arg Leu Ala Gly Pro Arg 
1               5                   10  


<210>  51
<211>  8
<212>  PRT
<213>  Lepus europaeus

<400>  51

Ala Ala Ser Lys Val Ser Ala Arg 
1               5               


<210>  52
<211>  8
<212>  PRT
<213>  Lepus europaeus

<400>  52

Asp Val Arg Ser His Thr Ser Lys 
1               5               


<210>  53
<211>  20
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  53
cgcgcgacta ggaagacttc                                                   20


<210>  54
<211>  20
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  54
atgtacccca tgaggtcggc                                                   20


<210>  55
<211>  20
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  55
aggaagactt ccgagcggtc                                                   20


<210>  56
<211>  20
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  56
ccaagaggga cgggaacctc                                                   20


<210>  57
<211>  20
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  57
tgctgggtcc arrtyacccc                                                   20


<210>  58
<211>  22
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  58
gctgtcatta cagttaaggg ca                                                22


<210>  59
<211>  31
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  59
tggggatccc gtatgatacc cgctgctttg a                                      31


<210>  60
<211>  30
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  60
ggcggaattc ctggtcatag cctccgtgaa                                        30


<210>  61
<211>  29
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  61
tgcggttatt gccgttgtcg cgccagcgg                                         29


<210>  62
<211>  30
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  62
ggcagaatac ctagtcatgg cctctgtgaa                                        30


<210>  63
<211>  23
<212>  DNA
<213>  Oryctolagus cuniculus

<400>  63
tatgayaccc gctgytttga ctc                                               23


<210>  64
<211>  22
<212>  DNA
<213>  Oryctolagus cuniculus


<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  n is a, c, g, or t

<400>  64
cngartayct vgtcatagcc tc                                                22


