                         SEQUENCE LISTING

<110>  Fred Hutchinson Cancer Research Center
 
<120>  COMPOSIITONS AND METHODS FOR DETECTING ALLOGENEIC MATTER IN A 
       SUBJECT

<130>  360056.411WO

<150>  US 61/605,680
<151>  2012-03-01

<160>  88    

<170>  PatentIn version 3.5

<210>  1
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  1
ccgcgggtat gaccagga                                                     18


<210>  2
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse  primer

<400>  2
tccaggtatc tgcggagcg                                                    19


<210>  3
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Probe sequence

<400>  3
cggctcagat cacccagcgc aa                                                22


<210>  4
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  4
cacgtttctt gtggcagctt aagtt                                             25


<210>  5
<211>  17
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  5
gctgtcgaag cgcacgg                                                      17


<210>  6
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Probe sequence

<400>  6
tcctcttggt tatagatgca tctttccagc aacc                                   34


<210>  7
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  7
cgtttcctgt ggcagcctaa                                                   20


<210>  8
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  8
gcacggactc ctcctggtta t                                                 21


<210>  9
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Probe sequence

<400>  9
cgtcccattg aagaaatgac actccctc                                          28


<210>  10
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  10
ccacgtttct tggagtactc tacgtc                                            26


<210>  11
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  11
tgcagtagtt gtccacccga c                                                 21


<210>  12
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Probe sequence

<400>  12
ttctcctcct ggttatggaa gtatctgtcc aggt                                   34


<210>  13
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  13
cgtttcttgg agcaggttaa aca                                               23


<210>  14
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  14
cgcacgtact cctcttggtg                                                   20


<210>  15
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Probe sequence

<400>  15
cacccgctcc gtcccgttga a                                                 21


<210>  16
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  16
cgtttcctgt ggcagggtaa gta                                               23


<210>  17
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  17
ccccgtagtt gtgtctgcac ac                                                22


<210>  18
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Probe sequence

<400>  18
aagtgtcatt tcttcaacgg gacggagc                                          28


<210>  19
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  19
acgtttcttg gagtactcta cggg                                              24


<210>  20
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  20
gtctgcagta ggtgtccacc ag                                                22


<210>  21
<211>  32
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Probe sequence

<400>  21
tataaccaag aggagtacgt gcgcttcgac ag                                     32


<210>  22
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  22
gcacgtttct tgaagcagga                                                   20


<210>  23
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  23
ccccgtagtt gtgtctgcac ac                                                22


<210>  24
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Probe sequence

<400>  24
ttctcctctt ggttatagat gcctctgtgc agat                                   34


<210>  25
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  25
ggttgctgga aagacgcg                                                     18


<210>  26
<211>  15
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  26
gtgtccaccg cggca                                                        15


<210>  27
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Probe sequence

<400>  27
agtacgcgcg ctacgacagc gac                                               23


<210>  28
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  28
cggttgctgg aaagaagcg                                                    19


<210>  29
<211>  16
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  29
ggtgtccacc gcggaa                                                       16


<210>  30
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Probe sequence

<400>  30
agtacgcgcg ctacgacagc gac                                               23


<210>  31
<211>  16
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  31
cggcctgctg cggaac                                                       16


<210>  32
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  32
aaccccgtag ttgtgtctgc aa                                                22


<210>  33
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Probe sequence

<400>  33
ccgcctccgc tccaggaggt                                                   20


<210>  34
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  34
caggctaagt gtgagtgtca tttcc                                             25


<210>  35
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  35
cctggtactc ccccaggtca                                                   20


<210>  36
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Probe sequence

<400>  36
tatctgatca ggttccacac tcgctccgt                                         29


<210>  37
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  37
cctggagagg aaggagactg c                                                 21


<210>  38
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  38
agccatgttt ctcagtgcac c                                                 21


<210>  39
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Probe sequence

<400>  39
acctccaaat ttgctgaact caggccac                                          28


<210>  40
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  40
aatttgatgg agacgaggag ttctat                                            26


<210>  41
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  41
gcaaattgcg ggtcaaatct                                                   20


<210>  42
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Probe sequence

<400>  42
atctgcggaa cagaggcaac tgcca                                             25


<210>  43
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  43
ttgcactgac aaacatcgct atc                                               23


<210>  44
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  44
tggtagcagc ggtagagttg g                                                 21


<210>  45
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Probe sequence

<400>  45
aacttgaaca gtctgattaa                                                   20


<210>  46
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  46
cgtgcgtctt gtgagcagaa g                                                 21


<210>  47
<211>  17
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  47
gtactcggcg gcaggca                                                      17


<210>  48
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  probe sequence

<400>  48
agcgtcaccg cccggaactc c                                                 21


<210>  49
<211>  16
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  49
cggagcgcgt gcgtta                                                       16


<210>  50
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  50
cgtgcggagc tccaactg                                                     18


<210>  51
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  probe sequence

<400>  51
aggacttcct tctggctgtt ccagtactcg                                        30


<210>  52
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  52
tgctacttca ccaacgggaa c                                                 21


<210>  53
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  53
ctattccagt actcggcgtc aa                                                22


<210>  54
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  probe sequence

<400>  54
tcggttatag atgtatctgg tcacaccccg                                        30


<210>  55
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  55
gacgtggggg tgtaccgc                                                     18


<210>  56
<211>  17
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  56
ctgcaagatc ccgcgga                                                      17


<210>  57
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  probe sequence

<400>  57
ttccttctgg ctgttccagt actcggcat                                         29


<210>  58
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  58
ccagaaggac ctcctggagc                                                   20


<210>  59
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  59
gtgtctgcag taggtgtcca cag                                               23


<210>  60
<211>  12
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  probe sequence

<400>  60
cggcccgcct ct                                                           12


<210>  61
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  61
ccagaaggac ctcctggagc                                                   20


<210>  62
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  62
gtgtctgcag taggtgtcca cag                                               23


<210>  63
<211>  12
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  probe sequence

<400>  63
cggcccgctt ct                                                           12


<210>  64
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  64
ccagaaggac atcctggaag                                                   20


<210>  65
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  65
gtgtctgcag taggtgtcca cag                                               23


<210>  66
<211>  12
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  probe sequence

<400>  66
cggcccgctc gt                                                           12


<210>  67
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  probe sequence

<400>  67
ttggagtact ctacgggtga gtgtt                                             25


<210>  68
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  probe sequence

<400>  68
gctgtcgaag cgcaggag                                                     18


<210>  69
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  probe sequence

<400>  69
tgcggttact ggagagacac ttccataacc                                        30


<210>  70
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  70
ttccaggagg cccatgag                                                     18


<210>  71
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  71
gggcatcagc ttctgcttta tg                                                22


<210>  72
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  probe sequence

<400>  72
aaggccaagg acttcccacc tgca                                              24


<210>  73
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  73
cctctctcca taaagaaaac tatgagaga                                         29


<210>  74
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  74
gctttataga aaaggaaaag gagagtatg                                         29


<210>  75
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  probe sequence

<400>  75
cttggttcat acccaccc                                                     18


<210>  76
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  76
cctctctcca taaagaaaac tatgagaga                                         29


<210>  77
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  77
ggattttttg tttctcgtta actaaatcag                                        30


<210>  78
<211>  17
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  probe sequence

<400>  78
ccctctacct gtaattc                                                      17


<210>  79
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  79
cacctccacc acccatagag a                                                 21


<210>  80
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  80
cgcagagtac attgtgaggt tttag                                             25


<210>  81
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  probe sequence

<400>  81
tcctggccca tgttcccaag ctct                                              24


<210>  82
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  82
ggttacggtg tcagaaaacc tga                                               23


<210>  83
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  83
agttccagca aacacttgaa gatg                                              24


<210>  84
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  probe sequence

<400>  84
tctccagcct ctgtgttaat gtgagccc                                          28


<210>  85
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  inhibitor oligonucleotide

<400>  85
acatcctgga gcaggcgcgg                                                   20


<210>  86
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  forward primer

<400>  86
cagaccacgt ttcttggagt actctac                                           27


<210>  87
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  reverse primer

<400>  87
ccttctggct gttccagtac tcct                                              24


<210>  88
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  probe sequence

<400>  88
cgctccgtcc cattgaagaa atgaca                                            26


