                         SEQUENCE LISTING

<110>  Broad Institute, Inc.
       Massachusetts General Hospital
       DeGrace, Marciela
       Hacohen, Nir
       Shapira, Sagi
       Wu, Liguo
 
<120>  Methods of Producing Viral Vaccines

<130>  39564-514001WO

<150>  US 61/585,006
<151>  2012-01-10

<160>  108   

<170>  PatentIn version 3.5

<210>  1
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  1
gcaagctgtt ggctttctac t                                                 21


<210>  2
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  2
gcaagctgtt ggctttctac t                                                 21


<210>  3
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  3
gccagaagat ggacaagttt a                                                 21


<210>  4
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  4
gccagaagat ggacaagttt a                                                 21


<210>  5
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  5
tacgtttacc ttgtccgata t                                                 21


<210>  6
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  6
caagcatcct ttggctaatt g                                                 21


<210>  7
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  7
gcatctgttt ggagagtacc t                                                 21


<210>  8
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  8
ttggtgaaga gccggagaaa t                                                 21


<210>  9
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  9
gcatctgttt ggagagtacc t                                                 21


<210>  10
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  10
acagatcacc ctgactaata c                                                 21


<210>  11
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  11
tggctgtcgc tcagctatat t                                                 21


<210>  12
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  12
gcttggcaat cgtccttctt a                                                 21


<210>  13
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  13
gcttggcaat cgtccttctt a                                                 21


<210>  14
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  14
accacatagt ccatcgaaga a                                                 21


<210>  15
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  15
catagtccat cgaagaagag t                                                 21


<210>  16
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  16
gtatcggcaa gcagtgtaaa c                                                 21


<210>  17
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  17
cagttgtgta gcagttgagt a                                                 21


<210>  18
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  18
agttgtgtag cagttgagta a                                                 21


<210>  19
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  19
tctcccgatt gctcctgtgt a                                                 21


<210>  20
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  20
gagtgcttgg ctgtttcctg t                                                 21


<210>  21
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  21
gcaagtattc tttggctaat t                                                 21


<210>  22
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  22
gcaagtattc tttggctaat t                                                 21


<210>  23
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  23
cacatagtcc atcgaagaag a                                                 21


<210>  24
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  24
gtcgtgcaga aacaaatggc t                                                 21


<210>  25
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  25
aggactagct gcccattatt t                                                 21


<210>  26
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  26
ccacatagtc catcgaagaa g                                                 21


<210>  27
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  27
ttgctcctgt gtaaagatgc c                                                 21


<210>  28
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  28
cctgcatttg taccaacgaa a                                                 21


<210>  29
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  29
gcagccacta ttcagactat a                                                 21


<210>  30
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  30
gcagccacta ttcagactat a                                                 21


<210>  31
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  31
cctgcatttg taccaacgaa a                                                 21


<210>  32
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  32
atgtatcggc aagcagtgta a                                                 21


<210>  33
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  33
acatagtcca tcgaagaaga g                                                 21


<210>  34
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  34
tatcggcaag cagtgtaaac g                                                 21


<210>  35
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  35
tgctaaccaa agagcatata t                                                 21


<210>  36
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  36
ggcaagcagt gtaaacggag g                                                 21


<210>  37
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  chemically synthesized oligonucleotide

<400>  37
ccgggcaagc tgttggcttt ctactctcga gagtagaaag ccaacagctt gctttttg         58


<210>  38
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  chemically synthesized oligonucleotide

<400>  38
ccgggcaagc tgttggcttt ctactctcga gagtagaaag ccaacagctt gctttttg         58


<210>  39
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  chemically synthesized oligonucleotide

<400>  39
ccgggccaga agatggacaa gtttactcga gtaaacttgt ccatcttctg gctttttg         58


<210>  40
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  chemically synthesized oligonucleotide

<400>  40
ccgggccaga agatggacaa gtttactcga gtaaacttgt ccatcttctg gctttttg         58


<210>  41
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  chemically synthesized oligonucleotide

<400>  41
ccggtacgtt taccttgtcc gatatctcga gatatcggac aaggtaaacg tatttttg         58


<210>  42
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  chemically synthesized oligonucleotide

<400>  42
ccggcaagca tcctttggct aattgctcga gcaattagcc aaaggatgct tgtttttg         58


<210>  43
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  chemically synthesized oligonucleotide

<400>  43
ccgggcatct gtttggagag tacctctcga gaggtactct ccaaacagat gctttttg         58


<210>  44
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  44
ccggttggtg aagagccgga gaaatctcga gatttctccg gctcttcacc aatttttg         58


<210>  45
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  45
ccgggcatct gtttggagag tacctctcga gaggtactct ccaaacagat gctttttg         58


<210>  46
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  46
ccggacagat caccctgact aatacctcga ggtattagtc agggtgatct gttttttg         58


<210>  47
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  47
ccggtggctg tcgctcagct atattctcga gaatatagct gagcgacagc catttttg         58


<210>  48
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  48
ccgggcttgg caatcgtcct tcttactcga gtaagaagga cgattgccaa gctttttg         58


<210>  49
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  49
ccgggcttgg caatcgtcct tcttactcga gtaagaagga cgattgccaa gctttttg         58


<210>  50
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  50
ccggaccaca tagtccatcg aagaactcga gttcttcgat ggactatgtg gttttttg         58


<210>  51
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  51
ccggcatagt ccatcgaaga agagtctcga gactcttctt cgatggacta tgtttttg         58


<210>  52
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  52
ccgggtatcg gcaagcagtg taaacctcga ggtttacact gcttgccgat actttttg         58


<210>  53
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  53
ccggcagttg tgtagcagtt gagtactcga gtactcaact gctacacaac tgtttttg         58


<210>  54
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  54
ccggagttgt gtagcagttg agtaactcga gttactcaac tgctacacaa cttttttg         58


<210>  55
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  55
ccggtctccc gattgctcct gtgtactcga gtacacagga gcaatcggga gatttttg         58


<210>  56
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  56
ccgggagtgc ttggctgttt cctgtctcga gacaggaaac agccaagcac tctttttg         58


<210>  57
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  57
ccgggcaagt attctttggc taattctcga gaattagcca aagaatactt gctttttg         58


<210>  58
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  58
ccgggcaagt attctttggc taattctcga gaattagcca aagaatactt gctttttg         58


<210>  59
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  59
ccggcacata gtccatcgaa gaagactcga gtcttcttcg atggactatg tgtttttg         58


<210>  60
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  60
ccgggtcgtg cagaaacaaa tggctctcga gagccatttg tttctgcacg actttttg         58


<210>  61
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  61
ccggaggact agctgcccat tatttctcga gaaataatgg gcagctagtc cttttttg         58


<210>  62
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  62
ccggccacat agtccatcga agaagctcga gcttcttcga tggactatgt ggtttttg         58


<210>  63
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  63
ccggttgctc ctgtgtaaag atgccctcga gggcatcttt acacaggagc aatttttg         58


<210>  64
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  64
ccggcctgca tttgtaccaa cgaaactcga gtttcgttgg tacaaatgca ggtttttg         58


<210>  65
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  65
ccgggcagcc actattcaga ctatactcga gtatagtctg aatagtggct gctttttg         58


<210>  66
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  66
ccgggcagcc actattcaga ctatactcga gtatagtctg aatagtggct gctttttg         58


<210>  67
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  67
ccggcctgca tttgtaccaa cgaaactcga gtttcgttgg tacaaatgca ggtttttg         58


<210>  68
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  68
ccggatgtat cggcaagcag tgtaactcga gttacactgc ttgccgatac attttttg         58


<210>  69
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  69
ccggacatag tccatcgaag aagagctcga gctcttcttc gatggactat gttttttg         58


<210>  70
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  70
ccggtatcgg caagcagtgt aaacgctcga gcgtttacac tgcttgccga tatttttg         58


<210>  71
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  71
ccggtgctaa ccaaagagca tatatctcga gatatatgct ctttggttag catttttg         58


<210>  72
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  72
ccggggcaag cagtgtaaac ggaggctcga gcctccgttt acactgcttg cctttttg         58


<210>  73
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  73
aattcaaaaa gcaagctgtt ggctttctac tctcgagagt agaaagccaa cagcttgc         58


<210>  74
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  74
aattcaaaaa gcaagctgtt ggctttctac tctcgagagt agaaagccaa cagcttgc         58


<210>  75
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  75
aattcaaaaa gccagaagat ggacaagttt actcgagtaa acttgtccat cttctggc         58


<210>  76
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  76
aattcaaaaa gccagaagat ggacaagttt actcgagtaa acttgtccat cttctggc         58


<210>  77
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  77
aattcaaaaa tacgtttacc ttgtccgata tctcgagata tcggacaagg taaacgta         58


<210>  78
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  78
aattcaaaaa caagcatcct ttggctaatt gctcgagcaa ttagccaaag gatgcttg         58


<210>  79
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  79
aattcaaaaa gcatctgttt ggagagtacc tctcgagagg tactctccaa acagatgc         58


<210>  80
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  80
aattcaaaaa ttggtgaaga gccggagaaa tctcgagatt tctccggctc ttcaccaa         58


<210>  81
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  81
aattcaaaaa gcatctgttt ggagagtacc tctcgagagg tactctccaa acagatgc         58


<210>  82
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  82
aattcaaaaa acagatcacc ctgactaata cctcgaggta ttagtcaggg tgatctgt         58


<210>  83
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  83
aattcaaaaa tggctgtcgc tcagctatat tctcgagaat atagctgagc gacagcca         58


<210>  84
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  84
aattcaaaaa gcttggcaat cgtccttctt actcgagtaa gaaggacgat tgccaagc         58


<210>  85
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  85
aattcaaaaa gcttggcaat cgtccttctt actcgagtaa gaaggacgat tgccaagc         58


<210>  86
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  86
aattcaaaaa accacatagt ccatcgaaga actcgagttc ttcgatggac tatgtggt         58


<210>  87
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  87
aattcaaaaa catagtccat cgaagaagag tctcgagact cttcttcgat ggactatg         58


<210>  88
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  88
aattcaaaaa gtatcggcaa gcagtgtaaa cctcgaggtt tacactgctt gccgatac         58


<210>  89
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  89
aattcaaaaa cagttgtgta gcagttgagt actcgagtac tcaactgcta cacaactg         58


<210>  90
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  90
aattcaaaaa agttgtgtag cagttgagta actcgagtta ctcaactgct acacaact         58


<210>  91
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  91
aattcaaaaa tctcccgatt gctcctgtgt actcgagtac acaggagcaa tcgggaga         58


<210>  92
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  92
aattcaaaaa gagtgcttgg ctgtttcctg tctcgagaca ggaaacagcc aagcactc         58


<210>  93
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  93
aattcaaaaa gcaagtattc tttggctaat tctcgagaat tagccaaaga atacttgc         58


<210>  94
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  94
aattcaaaaa gcaagtattc tttggctaat tctcgagaat tagccaaaga atacttgc         58


<210>  95
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  95
aattcaaaaa cacatagtcc atcgaagaag actcgagtct tcttcgatgg actatgtg         58


<210>  96
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  96
aattcaaaaa gtcgtgcaga aacaaatggc tctcgagagc catttgtttc tgcacgac         58


<210>  97
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  97
aattcaaaaa aggactagct gcccattatt tctcgagaaa taatgggcag ctagtcct         58


<210>  98
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  98
aattcaaaaa ccacatagtc catcgaagaa gctcgagctt cttcgatgga ctatgtgg         58


<210>  99
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  99
aattcaaaaa ttgctcctgt gtaaagatgc cctcgagggc atctttacac aggagcaa         58


<210>  100
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  100
aattcaaaaa cctgcatttg taccaacgaa actcgagttt cgttggtaca aatgcagg         58


<210>  101
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  101
aattcaaaaa gcagccacta ttcagactat actcgagtat agtctgaata gtggctgc         58


<210>  102
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  102
aattcaaaaa gcagccacta ttcagactat actcgagtat agtctgaata gtggctgc         58


<210>  103
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  103
aattcaaaaa cctgcatttg taccaacgaa actcgagttt cgttggtaca aatgcagg         58


<210>  104
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  104
aattcaaaaa atgtatcggc aagcagtgta actcgagtta cactgcttgc cgatacat         58


<210>  105
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  105
aattcaaaaa acatagtcca tcgaagaaga gctcgagctc ttcttcgatg gactatgt         58


<210>  106
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  106
aattcaaaaa tatcggcaag cagtgtaaac gctcgagcgt ttacactgct tgccgata         58


<210>  107
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  107
aattcaaaaa tgctaaccaa agagcatata tctcgagata tatgctcttt ggttagca         58


<210>  108
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chemically synthesized oligonucleotide

<400>  108
aattcaaaaa ggcaagcagt gtaaacggag gctcgagcct ccgtttacac tgcttgcc         58


