                         SEQUENCE LISTING

<110>  INSTITUT PASTEUR
       PATHOQUEST
       ECOLE NATIONALE VETERINAIRE D'ALFORT
       ELOIT, Marc
       CHEVAL, Justine
       SAUVAGE, Virginie
 
<120>  IDENTIFICATION OF A SWINE PARECHO-like VIRUS AND APPLICATIONS

<130>  361944D30195

<150>  US 61/567,904
<151>  2011-12-07

<160>  91    

<170>  PatentIn version 3.5

<210>  1
<211>  6057
<212>  DNA
<213>  Swine Parechovirus-like virus

<400>  1
ctagtttatg ttgtgtgttg tctgttttgt tttgtttaaa ttgtatacaa gatccttccc       60

gccgacacag acctcgacag tctggtgtag gagggttggt gatattaatt tgccccaaaa      120

gagtgaccgt gatacgtgga aaccatgagt acatgtgtat ccgtggagga tcgcccggga      180

ctggattcca tatcccattg ccatcccaac aaacggaggg tatacccacc acgtgcgcgt      240

ttgcagtggg aatctgcaaa tttagtcata ctgcctgata gggtgtgggc ctgcactttg      300

gggtactcag gctgttcata taatatggat gttgttgttg atactttaac taaggaagtt      360

tctcaaacgt tgcttggtga tactgctgaa tctggcggag gttttggtgg tgttctttcg      420

ggatcagcca ccactaatgc agcaaatatt gtccagcata gtgctgctcc tacggctcct      480

gccaatcctg ttttggatgc caatgaccct tatgaagcat gtgcgtactc gaaagagacc      540

tcacgcgaaa ctccgtctaa aatggttttg cttgacattg tgcattttga caacacctgg      600

gtatggggcg gaaatgataa gttgcaattg ccattaccca aatgcttttg gaagaatcgg      660

tcgtttcctg cttatggcac atcacgatat tttcagttct ttcgtggttc gttccatatt      720

aagattcagg tcaatgctgc tgcaggttct gccggttctt ttgtcgttgt ctatgtgcca      780

aatgaccatt atcagagttg gaataataag gatttgatac tccatacaat gtttaattgg      840

ccacatgtca tttttaatgt ggcgactatg actgaggcag atttgtacat tccttacatt      900

aatacccaca atcttgctaa cactgattct tctgactgcg ggtgggtggt agttacacct      960

tttacgcact tggaagtagc tagcaccact actaatacac tggacattgc tgttttcggg     1020

tctttggttg attttcaatt ccaaggccca aggccatata ccgatttacc tagtgattct     1080

caggggccca agcgtgttgc ccgcaataag aaatataagt acacacgcaa caaaattgat     1140

attgctgaag ggcctggatc aatgaacatc gccaatgtac ttagcacaac agccgcccaa     1200

tcgatagctt tggttggtga acgtgctttt attgatccta gtgttgcagg cacgagagtg     1260

agagtccgca cgtttcgtga tgtaacaaaa attaaagcat tacctttgct accgttcaca     1320

gcttcacata gtgaatattg tatttttgat tggcaggcta gccatgctcc aacaaccaag     1380

tctccgattt ttgggcgtgg ctataagata cgagagcttg gtaatttggg tccattgtca     1440

acagcctatc agttttggcg tggttctatt attttcactc tcaccatttt tgctagcagt     1500

tttcaccgtg gcaggcttag aattgtcttg tttccaaatg gaacccacag ttttagtcag     1560

gatgatgcca atgcgttgat atttactgtc tgtgacattg gtgaacaatc ctcatttgat     1620

attactttgc catttactca ttacaattgg attagggaat gtgataattc tgtagttgtc     1680

ctggtcaacg tgtatgttga aacccgattg gctcacaata atgcatcttc caacgttata     1740

aaatgcgcac tttttgtgcg tggcggcgag gattttgagt tcttggcgcc atgcggtgac     1800

actgtcaagt tccatggttg gggatcggat atggatgaag ctgatccttt ggatgacatg     1860

gaaccaggac atcctgattg tcttacattg gaatctaaag atgggagtag tggtaaaggg     1920

ccccagtgtg cgcagatggc tggattaaca agtgtggaga atgatggcac aactgataac     1980

caacttaatt gtgcagcacc taagtttatc aatatccata agctgactac ttcaatattt     2040

gccaaagatc atatgcacct tgattatttc tttggtcgtg gatggtatgt catgaaacat     2100

aactatgagg gcgagagccg tgcccctttt tatattgatg tggatgctcc atcgtctatg     2160

ccaggcgctg caatgaattt cttttctttc tgggctgggg aggttaactt ccatgttgtc     2220

aacaatagtg atgacccaat ggctgtcact catagttatt cgcatgaggc tagcactgtt     2280

ggtcccgctg aaggtctagg gttgataatt gtgccgcctc gtgagatgat atcatttgca     2340

gcccctttct attcctggtc gccattgcgg actgtgcttg ctcaccaaaa tagtgcagtt     2400

aagcgcacgt ttggcatttt gaagttagtg cctgaggctc caaaaggaca ggtcattgtt     2460

tatgcatcac ttagaactcc atgcttcttc ttagtcaagc catttcctat acagacaact     2520

gcagctaaga tggctgtgta tccatcaaag ctgacatcag ctgaggaggc agaggagcta     2580

aagttcaaat tggtgcatga gccttatgag cagtttttta tcccccatta tggggatatt     2640

cctagttttc aaagggattt tattaattgg ctaggcagta aagaagaatt acaaaacatg     2700

atattacaat gtggagatgt ggaacaaaat cctggccctg tcttgatgta tgatggtaat     2760

aagaaatttt gtgtcccagt ctgcaatggt tatttgactt ttcatggcag tcccgaacag     2820

ttcttggtga gtggtaatgg cacactcatc atttataaag aagtttatgg aatgcttcct     2880

tacgaagagg cttacccaga ggatctgtct agcaattggc atattgaatg gcagtgtgtc     2940

aatggcaagg ttgattcttt ggttaagagg atggctaatt ggatgttgct gcgttatatt     3000

gatctagtta tctttggtgg cacttggaga aggttgctcg cccccaacac agatatgaaa     3060

tttgactccc agggagttga tgacatgatg aattctttga ctgggctgct taattcttct     3120

gctatggagt tgctgggtaa tgatgtttca aaatctatat tgtgctgtct ggtccgcttt     3180

gttgcggtgc ttgtcatgtt ttttcgtaat cctgacctta ttaatggagt tgcactggca     3240

tcttatttag cctctgaatt ttctagtgta agacttgtgt cgtctcaaac agccgctttt     3300

gtggatgccc tttttaatgg tgatttgtat aaactctctg aacaattcct ttcaatgatg     3360

gatattggtt ctgattctga ctataaacaa ttaatcaagg agacgttggg atcgtaccct     3420

cctgaaatga acccatttga gtcacagagt ttggctgcat ttaatgcttt gtccttgagt     3480

gctcgtaatt gtacatggtg gattgagctc ttccagaaat tgcacacgtt cgtgcgtgac     3540

ttattgaaac cagatacttc ggcaaagttt catgaatggt gtaggaaaaa taagatgctc     3600

atttccaatt ttatgtatac tcttaatgag catttgaagg attgtgccac cacctgcaat     3660

ttgcgtaaga gggaatttag agacaagcat aagtggttgt tatctgttct taatcgcctt     3720

actgagggtt ttaccacgta tggggtacag aatgatatca cacgagcatt gttggacatg     3780

cgtaagagca tgttagctgt taagctaggg caagaatatc agaatacgtg tgctcgtgag     3840

gagccccttg gtgtgctgct acgtggcgaa cctggacaag gaaaatcctt tatgacacat     3900

ctgctcgtgc gtagtgtttg caatgctatg ggctggaagg tttctgagag tgtgtttagc     3960

caccctacat caagtgagtt ctttgatggg tatgctgggc aaccgattca tcttatcgat     4020

gattttgggc agaatgtgga ggaacctgaa tataaagttt tgtgccagtg tatgtcttcc     4080

ataccatttt ctgtgcctat ggcttcgctt gaggaaaagg gtttgcctta tacttcaaag     4140

ttagttattg ccacgacaaa taaatcagat tggtcatctc gtaccttgtg cgctccaggt     4200

gctttgaagc gccggtttcc tattgtttat accgttcgcg cacggaggac tttaaccaag     4260

aatggccttc ttgatgtcaa cgcacatatg agtgcagtgc gcgatggagc agcatgggag     4320

tatactacca atggttatga ctggcaaccc ttttctgtta atgatcttgc tgctgaaata     4380

attaaacagt tagagcagcg tagggaatct tttcaactct ggaattcttt tattagtcag     4440

gctcctgaaa cttttgaggc ttggtgtgat gatatggtgt cccttcttgg ccctgctgtt     4500

ccagttgctt cagtgttcga ctattgcgct agcactggtg ttgtacccat gttaaagcaa     4560

gcgtcggaat ctgtccttaa gtggtttgat tcgtgtgttg acagcatggt gtcgtttgtt     4620

acacgtaaca aaaagtggat tgcttttggt gctttaacta tgagtgtgtt aggtattgct     4680

atatctatgc ttaaggaatt ggacagccag cgtccctata atcagaccgc ccataagatg     4740

cctgttacta agctcacgcg tgggcgacgt gtgcttgttt cccaaggccc ttataatgaa     4800

ttccagcatt attctaaata ctgtgttttt ctccattctg ggtctattac acttcatggc     4860

cttgcatttg gtggtaattc ttttttgttt tacacacatg gccttgctac tcttgagcgc     4920

tatgataatt gggtgcttga ctataatggg tccatgtttg atttagatat tgaaactgtg     4980

gatgagttat acttgaatgg agagtccatg gacctttgtc ttatcacctg caagccttta     5040

cctgttactt ttgctagcat cgtgggccat ttgtctgatg gagaccttgg agatggtgtc     5100

atcttgtggc gaggtcgaga gggcctaaca tgtatgccaa tttatgacct tcaccattat     5160

ggcactgtca ccactaacca aggagataca tgcacatcag caatacgcta ccgtgcaaaa     5220

acgacacgcg gtatgtgtgg tggccttgtt ttgtctaaaa ttagtggcac ttataaagct     5280

gttggtttgc atgttgctgg aaatggtgtt tatggtgttg cagcaagtct gagtgtgtgt     5340

aagcagcttg aaagtcaagg actagtcacc gacaccaaac catggcctgg tgtgcgtgta     5400

catcaacctt caaagagtgt tctaaagccc tctccacttt atggctttgt cgaacaggag     5460

ctccacccag cggtgttgag cccgtttgac aatcgcctga agtgtgaggt tgactctgtg     5520

attggcagac aagctttgaa atacaattca aatgttttta atcctggacc ttactatgat     5580

gaagtgcttg aggcgttcgc agttgatttt aatggcaggt ttggtattaa tgaaatgatg     5640

tcagctgaag aggtctttgc cctatctggt gacgaagcga tcgagctttc tacctcacct     5700

ggtttaaagt atactagtaa gggcttgaga aagagggatc tcgtgcctgg tggcaaggca     5760

tgtgacctat tattgagtga tgttgaacgc cttatgaatg atccaaaagg aactcctgtc     5820

tacttctact gtcaccttaa agatgagctt aggccccaag agaagattga acaaggcctt     5880

acaaggtgca ttgaaagtag cgattttgac tatgttttta gtgccaaaag agtcttttgc     5940

aagctgttcc ggcaacttta tgattctgac cctattgaga ctggatttgc tgttggtatc     6000

aactgtattg ctgactggaa gaatttgttg gacggcgagc aaccttctcc aagtgcc        6057


<210>  2
<211>  5913
<212>  DNA
<213>  Swine Parechovirus-like virus

<400>  2
atgagtacat gtgtatccgt ggaggatcgc ccgggactgg attccatatc ccattgccat       60

cccaacaaac ggagggtata cccaccacgt gcgcgtttgc agtgggaatc tgcaaattta      120

gtcatactgc ctgatagggt gtgggcctgc actttggggt actcaggctg ttcatataat      180

atggatgttg ttgttgatac tttaactaag gaagtttctc aaacgttgct tggtgatact      240

gctgaatctg gcggaggttt tggtggtgtt ctttcgggat cagccaccac taatgcagca      300

aatattgtcc agcatagtgc tgctcctacg gctcctgcca atcctgtttt ggatgccaat      360

gacccttatg aagcatgtgc gtactcgaaa gagacctcac gcgaaactcc gtctaaaatg      420

gttttgcttg acattgtgca ttttgacaac acctgggtat ggggcggaaa tgataagttg      480

caattgccat tacccaaatg cttttggaag aatcggtcgt ttcctgctta tggcacatca      540

cgatattttc agttctttcg tggttcgttc catattaaga ttcaggtcaa tgctgctgca      600

ggttctgccg gttcttttgt cgttgtctat gtgccaaatg accattatca gagttggaat      660

aataaggatt tgatactcca tacaatgttt aattggccac atgtcatttt taatgtggcg      720

actatgactg aggcagattt gtacattcct tacattaata cccacaatct tgctaacact      780

gattcttctg actgcgggtg ggtggtagtt acacctttta cgcacttgga agtagctagc      840

accactacta atacactgga cattgctgtt ttcgggtctt tggttgattt tcaattccaa      900

ggcccaaggc catataccga tttacctagt gattctcagg ggcccaagcg tgttgcccgc      960

aataagaaat ataagtacac acgcaacaaa attgatattg ctgaagggcc tggatcaatg     1020

aacatcgcca atgtacttag cacaacagcc gcccaatcga tagctttggt tggtgaacgt     1080

gcttttattg atcctagtgt tgcaggcacg agagtgagag tccgcacgtt tcgtgatgta     1140

acaaaaatta aagcattacc tttgctaccg ttcacagctt cacatagtga atattgtatt     1200

tttgattggc aggctagcca tgctccaaca accaagtctc cgatttttgg gcgtggctat     1260

aagatacgag agcttggtaa tttgggtcca ttgtcaacag cctatcagtt ttggcgtggt     1320

tctattattt tcactctcac catttttgct agcagttttc accgtggcag gcttagaatt     1380

gtcttgtttc caaatggaac ccacagtttt agtcaggatg atgccaatgc gttgatattt     1440

actgtctgtg acattggtga acaatcctca tttgatatta ctttgccatt tactcattac     1500

aattggatta gggaatgtga taattctgta gttgtcctgg tcaacgtgta tgttgaaacc     1560

cgattggctc acaataatgc atcttccaac gttataaaat gcgcactttt tgtgcgtggc     1620

ggcgaggatt ttgagttctt ggcgccatgc ggtgacactg tcaagttcca tggttgggga     1680

tcggatatgg atgaagctga tcctttggat gacatggaac caggacatcc tgattgtctt     1740

acattggaat ctaaagatgg gagtagtggt aaagggcccc agtgtgcgca gatggctgga     1800

ttaacaagtg tggagaatga tggcacaact gataaccaac ttaattgtgc agcacctaag     1860

tttatcaata tccataagct gactacttca atatttgcca aagatcatat gcaccttgat     1920

tatttctttg gtcgtggatg gtatgtcatg aaacataact atgagggcga gagccgtgcc     1980

cctttttata ttgatgtgga tgctccatcg tctatgccag gcgctgcaat gaatttcttt     2040

tctttctggg ctggggaggt taacttccat gttgtcaaca atagtgatga cccaatggct     2100

gtcactcata gttattcgca tgaggctagc actgttggtc ccgctgaagg tctagggttg     2160

ataattgtgc cgcctcgtga gatgatatca tttgcagccc ctttctattc ctggtcgcca     2220

ttgcggactg tgcttgctca ccaaaatagt gcagttaagc gcacgtttgg cattttgaag     2280

ttagtgcctg aggctccaaa aggacaggtc attgtttatg catcacttag aactccatgc     2340

ttcttcttag tcaagccatt tcctatacag acaactgcag ctaagatggc tgtgtatcca     2400

tcaaagctga catcagctga ggaggcagag gagctaaagt tcaaattggt gcatgagcct     2460

tatgagcagt tttttatccc ccattatggg gatattccta gttttcaaag ggattttatt     2520

aattggctag gcagtaaaga agaattacaa aacatgatat tacaatgtgg agatgtggaa     2580

caaaatcctg gccctgtctt gatgtatgat ggtaataaga aattttgtgt cccagtctgc     2640

aatggttatt tgacttttca tggcagtccc gaacagttct tggtgagtgg taatggcaca     2700

ctcatcattt ataaagaagt ttatggaatg cttccttacg aagaggctta cccagaggat     2760

ctgtctagca attggcatat tgaatggcag tgtgtcaatg gcaaggttga ttctttggtt     2820

aagaggatgg ctaattggat gttgctgcgt tatattgatc tagttatctt tggtggcact     2880

tggagaaggt tgctcgcccc caacacagat atgaaatttg actcccaggg agttgatgac     2940

atgatgaatt ctttgactgg gctgcttaat tcttctgcta tggagttgct gggtaatgat     3000

gtttcaaaat ctatattgtg ctgtctggtc cgctttgttg cggtgcttgt catgtttttt     3060

cgtaatcctg accttattaa tggagttgca ctggcatctt atttagcctc tgaattttct     3120

agtgtaagac ttgtgtcgtc tcaaacagcc gcttttgtgg atgccctttt taatggtgat     3180

ttgtataaac tctctgaaca attcctttca atgatggata ttggttctga ttctgactat     3240

aaacaattaa tcaaggagac gttgggatcg taccctcctg aaatgaaccc atttgagtca     3300

cagagtttgg ctgcatttaa tgctttgtcc ttgagtgctc gtaattgtac atggtggatt     3360

gagctcttcc agaaattgca cacgttcgtg cgtgacttat tgaaaccaga tacttcggca     3420

aagtttcatg aatggtgtag gaaaaataag atgctcattt ccaattttat gtatactctt     3480

aatgagcatt tgaaggattg tgccaccacc tgcaatttgc gtaagaggga atttagagac     3540

aagcataagt ggttgttatc tgttcttaat cgccttactg agggttttac cacgtatggg     3600

gtacagaatg atatcacacg agcattgttg gacatgcgta agagcatgtt agctgttaag     3660

ctagggcaag aatatcagaa tacgtgtgct cgtgaggagc cccttggtgt gctgctacgt     3720

ggcgaacctg gacaaggaaa atcctttatg acacatctgc tcgtgcgtag tgtttgcaat     3780

gctatgggct ggaaggtttc tgagagtgtg tttagccacc ctacatcaag tgagttcttt     3840

gatgggtatg ctgggcaacc gattcatctt atcgatgatt ttgggcagaa tgtggaggaa     3900

cctgaatata aagttttgtg ccagtgtatg tcttccatac cattttctgt gcctatggct     3960

tcgcttgagg aaaagggttt gccttatact tcaaagttag ttattgccac gacaaataaa     4020

tcagattggt catctcgtac cttgtgcgct ccaggtgctt tgaagcgccg gtttcctatt     4080

gtttataccg ttcgcgcacg gaggacttta accaagaatg gccttcttga tgtcaacgca     4140

catatgagtg cagtgcgcga tggagcagca tgggagtata ctaccaatgg ttatgactgg     4200

caaccctttt ctgttaatga tcttgctgct gaaataatta aacagttaga gcagcgtagg     4260

gaatcttttc aactctggaa ttcttttatt agtcaggctc ctgaaacttt tgaggcttgg     4320

tgtgatgata tggtgtccct tcttggccct gctgttccag ttgcttcagt gttcgactat     4380

tgcgctagca ctggtgttgt acccatgtta aagcaagcgt cggaatctgt ccttaagtgg     4440

tttgattcgt gtgttgacag catggtgtcg tttgttacac gtaacaaaaa gtggattgct     4500

tttggtgctt taactatgag tgtgttaggt attgctatat ctatgcttaa ggaattggac     4560

agccagcgtc cctataatca gaccgcccat aagatgcctg ttactaagct cacgcgtggg     4620

cgacgtgtgc ttgtttccca aggcccttat aatgaattcc agcattattc taaatactgt     4680

gtttttctcc attctgggtc tattacactt catggccttg catttggtgg taattctttt     4740

ttgttttaca cacatggcct tgctactctt gagcgctatg ataattgggt gcttgactat     4800

aatgggtcca tgtttgattt agatattgaa actgtggatg agttatactt gaatggagag     4860

tccatggacc tttgtcttat cacctgcaag cctttacctg ttacttttgc tagcatcgtg     4920

ggccatttgt ctgatggaga ccttggagat ggtgtcatct tgtggcgagg tcgagagggc     4980

ctaacatgta tgccaattta tgaccttcac cattatggca ctgtcaccac taaccaagga     5040

gatacatgca catcagcaat acgctaccgt gcaaaaacga cacgcggtat gtgtggtggc     5100

cttgttttgt ctaaaattag tggcacttat aaagctgttg gtttgcatgt tgctggaaat     5160

ggtgtttatg gtgttgcagc aagtctgagt gtgtgtaagc agcttgaaag tcaaggacta     5220

gtcaccgaca ccaaaccatg gcctggtgtg cgtgtacatc aaccttcaaa gagtgttcta     5280

aagccctctc cactttatgg ctttgtcgaa caggagctcc acccagcggt gttgagcccg     5340

tttgacaatc gcctgaagtg tgaggttgac tctgtgattg gcagacaagc tttgaaatac     5400

aattcaaatg tttttaatcc tggaccttac tatgatgaag tgcttgaggc gttcgcagtt     5460

gattttaatg gcaggtttgg tattaatgaa atgatgtcag ctgaagaggt ctttgcccta     5520

tctggtgacg aagcgatcga gctttctacc tcacctggtt taaagtatac tagtaagggc     5580

ttgagaaaga gggatctcgt gcctggtggc aaggcatgtg acctattatt gagtgatgtt     5640

gaacgcctta tgaatgatcc aaaaggaact cctgtctact tctactgtca ccttaaagat     5700

gagcttaggc cccaagagaa gattgaacaa ggccttacaa ggtgcattga aagtagcgat     5760

tttgactatg tttttagtgc caaaagagtc ttttgcaagc tgttccggca actttatgat     5820

tctgacccta ttgagactgg atttgctgtt ggtatcaact gtattgctga ctggaagaat     5880

ttgttggacg gcgagcaacc ttctccaagt gcc                                  5913


<210>  3
<211>  1971
<212>  PRT
<213>  Swine Parechovirus-like virus

<400>  3

Met Ser Thr Cys Val Ser Val Glu Asp Arg Pro Gly Leu Asp Ser Ile 
1               5                   10                  15      


Ser His Cys His Pro Asn Lys Arg Arg Val Tyr Pro Pro Arg Ala Arg 
            20                  25                  30          


Leu Gln Trp Glu Ser Ala Asn Leu Val Ile Leu Pro Asp Arg Val Trp 
        35                  40                  45              


Ala Cys Thr Leu Gly Tyr Ser Gly Cys Ser Tyr Asn Met Asp Val Val 
    50                  55                  60                  


Val Asp Thr Leu Thr Lys Glu Val Ser Gln Thr Leu Leu Gly Asp Thr 
65                  70                  75                  80  


Ala Glu Ser Gly Gly Gly Phe Gly Gly Val Leu Ser Gly Ser Ala Thr 
                85                  90                  95      


Thr Asn Ala Ala Asn Ile Val Gln His Ser Ala Ala Pro Thr Ala Pro 
            100                 105                 110         


Ala Asn Pro Val Leu Asp Ala Asn Asp Pro Tyr Glu Ala Cys Ala Tyr 
        115                 120                 125             


Ser Lys Glu Thr Ser Arg Glu Thr Pro Ser Lys Met Val Leu Leu Asp 
    130                 135                 140                 


Ile Val His Phe Asp Asn Thr Trp Val Trp Gly Gly Asn Asp Lys Leu 
145                 150                 155                 160 


Gln Leu Pro Leu Pro Lys Cys Phe Trp Lys Asn Arg Ser Phe Pro Ala 
                165                 170                 175     


Tyr Gly Thr Ser Arg Tyr Phe Gln Phe Phe Arg Gly Ser Phe His Ile 
            180                 185                 190         


Lys Ile Gln Val Asn Ala Ala Ala Gly Ser Ala Gly Ser Phe Val Val 
        195                 200                 205             


Val Tyr Val Pro Asn Asp His Tyr Gln Ser Trp Asn Asn Lys Asp Leu 
    210                 215                 220                 


Ile Leu His Thr Met Phe Asn Trp Pro His Val Ile Phe Asn Val Ala 
225                 230                 235                 240 


Thr Met Thr Glu Ala Asp Leu Tyr Ile Pro Tyr Ile Asn Thr His Asn 
                245                 250                 255     


Leu Ala Asn Thr Asp Ser Ser Asp Cys Gly Trp Val Val Val Thr Pro 
            260                 265                 270         


Phe Thr His Leu Glu Val Ala Ser Thr Thr Thr Asn Thr Leu Asp Ile 
        275                 280                 285             


Ala Val Phe Gly Ser Leu Val Asp Phe Gln Phe Gln Gly Pro Arg Pro 
    290                 295                 300                 


Tyr Thr Asp Leu Pro Ser Asp Ser Gln Gly Pro Lys Arg Val Ala Arg 
305                 310                 315                 320 


Asn Lys Lys Tyr Lys Tyr Thr Arg Asn Lys Ile Asp Ile Ala Glu Gly 
                325                 330                 335     


Pro Gly Ser Met Asn Ile Ala Asn Val Leu Ser Thr Thr Ala Ala Gln 
            340                 345                 350         


Ser Ile Ala Leu Val Gly Glu Arg Ala Phe Ile Asp Pro Ser Val Ala 
        355                 360                 365             


Gly Thr Arg Val Arg Val Arg Thr Phe Arg Asp Val Thr Lys Ile Lys 
    370                 375                 380                 


Ala Leu Pro Leu Leu Pro Phe Thr Ala Ser His Ser Glu Tyr Cys Ile 
385                 390                 395                 400 


Phe Asp Trp Gln Ala Ser His Ala Pro Thr Thr Lys Ser Pro Ile Phe 
                405                 410                 415     


Gly Arg Gly Tyr Lys Ile Arg Glu Leu Gly Asn Leu Gly Pro Leu Ser 
            420                 425                 430         


Thr Ala Tyr Gln Phe Trp Arg Gly Ser Ile Ile Phe Thr Leu Thr Ile 
        435                 440                 445             


Phe Ala Ser Ser Phe His Arg Gly Arg Leu Arg Ile Val Leu Phe Pro 
    450                 455                 460                 


Asn Gly Thr His Ser Phe Ser Gln Asp Asp Ala Asn Ala Leu Ile Phe 
465                 470                 475                 480 


Thr Val Cys Asp Ile Gly Glu Gln Ser Ser Phe Asp Ile Thr Leu Pro 
                485                 490                 495     


Phe Thr His Tyr Asn Trp Ile Arg Glu Cys Asp Asn Ser Val Val Val 
            500                 505                 510         


Leu Val Asn Val Tyr Val Glu Thr Arg Leu Ala His Asn Asn Ala Ser 
        515                 520                 525             


Ser Asn Val Ile Lys Cys Ala Leu Phe Val Arg Gly Gly Glu Asp Phe 
    530                 535                 540                 


Glu Phe Leu Ala Pro Cys Gly Asp Thr Val Lys Phe His Gly Trp Gly 
545                 550                 555                 560 


Ser Asp Met Asp Glu Ala Asp Pro Leu Asp Asp Met Glu Pro Gly His 
                565                 570                 575     


Pro Asp Cys Leu Thr Leu Glu Ser Lys Asp Gly Ser Ser Gly Lys Gly 
            580                 585                 590         


Pro Gln Cys Ala Gln Met Ala Gly Leu Thr Ser Val Glu Asn Asp Gly 
        595                 600                 605             


Thr Thr Asp Asn Gln Leu Asn Cys Ala Ala Pro Lys Phe Ile Asn Ile 
    610                 615                 620                 


His Lys Leu Thr Thr Ser Ile Phe Ala Lys Asp His Met His Leu Asp 
625                 630                 635                 640 


Tyr Phe Phe Gly Arg Gly Trp Tyr Val Met Lys His Asn Tyr Glu Gly 
                645                 650                 655     


Glu Ser Arg Ala Pro Phe Tyr Ile Asp Val Asp Ala Pro Ser Ser Met 
            660                 665                 670         


Pro Gly Ala Ala Met Asn Phe Phe Ser Phe Trp Ala Gly Glu Val Asn 
        675                 680                 685             


Phe His Val Val Asn Asn Ser Asp Asp Pro Met Ala Val Thr His Ser 
    690                 695                 700                 


Tyr Ser His Glu Ala Ser Thr Val Gly Pro Ala Glu Gly Leu Gly Leu 
705                 710                 715                 720 


Ile Ile Val Pro Pro Arg Glu Met Ile Ser Phe Ala Ala Pro Phe Tyr 
                725                 730                 735     


Ser Trp Ser Pro Leu Arg Thr Val Leu Ala His Gln Asn Ser Ala Val 
            740                 745                 750         


Lys Arg Thr Phe Gly Ile Leu Lys Leu Val Pro Glu Ala Pro Lys Gly 
        755                 760                 765             


Gln Val Ile Val Tyr Ala Ser Leu Arg Thr Pro Cys Phe Phe Leu Val 
    770                 775                 780                 


Lys Pro Phe Pro Ile Gln Thr Thr Ala Ala Lys Met Ala Val Tyr Pro 
785                 790                 795                 800 


Ser Lys Leu Thr Ser Ala Glu Glu Ala Glu Glu Leu Lys Phe Lys Leu 
                805                 810                 815     


Val His Glu Pro Tyr Glu Gln Phe Phe Ile Pro His Tyr Gly Asp Ile 
            820                 825                 830         


Pro Ser Phe Gln Arg Asp Phe Ile Asn Trp Leu Gly Ser Lys Glu Glu 
        835                 840                 845             


Leu Gln Asn Met Ile Leu Gln Cys Gly Asp Val Glu Gln Asn Pro Gly 
    850                 855                 860                 


Pro Val Leu Met Tyr Asp Gly Asn Lys Lys Phe Cys Val Pro Val Cys 
865                 870                 875                 880 


Asn Gly Tyr Leu Thr Phe His Gly Ser Pro Glu Gln Phe Leu Val Ser 
                885                 890                 895     


Gly Asn Gly Thr Leu Ile Ile Tyr Lys Glu Val Tyr Gly Met Leu Pro 
            900                 905                 910         


Tyr Glu Glu Ala Tyr Pro Glu Asp Leu Ser Ser Asn Trp His Ile Glu 
        915                 920                 925             


Trp Gln Cys Val Asn Gly Lys Val Asp Ser Leu Val Lys Arg Met Ala 
    930                 935                 940                 


Asn Trp Met Leu Leu Arg Tyr Ile Asp Leu Val Ile Phe Gly Gly Thr 
945                 950                 955                 960 


Trp Arg Arg Leu Leu Ala Pro Asn Thr Asp Met Lys Phe Asp Ser Gln 
                965                 970                 975     


Gly Val Asp Asp Met Met Asn Ser Leu Thr Gly Leu Leu Asn Ser Ser 
            980                 985                 990         


Ala Met Glu Leu Leu Gly Asn Asp  Val Ser Lys Ser Ile  Leu Cys Cys 
        995                 1000                 1005             


Leu Val  Arg Phe Val Ala Val  Leu Val Met Phe Phe  Arg Asn Pro 
    1010                 1015                 1020             


Asp Leu  Ile Asn Gly Val Ala  Leu Ala Ser Tyr Leu  Ala Ser Glu 
    1025                 1030                 1035             


Phe Ser  Ser Val Arg Leu Val  Ser Ser Gln Thr Ala  Ala Phe Val 
    1040                 1045                 1050             


Asp Ala  Leu Phe Asn Gly Asp  Leu Tyr Lys Leu Ser  Glu Gln Phe 
    1055                 1060                 1065             


Leu Ser  Met Met Asp Ile Gly  Ser Asp Ser Asp Tyr  Lys Gln Leu 
    1070                 1075                 1080             


Ile Lys  Glu Thr Leu Gly Ser  Tyr Pro Pro Glu Met  Asn Pro Phe 
    1085                 1090                 1095             


Glu Ser  Gln Ser Leu Ala Ala  Phe Asn Ala Leu Ser  Leu Ser Ala 
    1100                 1105                 1110             


Arg Asn  Cys Thr Trp Trp Ile  Glu Leu Phe Gln Lys  Leu His Thr 
    1115                 1120                 1125             


Phe Val  Arg Asp Leu Leu Lys  Pro Asp Thr Ser Ala  Lys Phe His 
    1130                 1135                 1140             


Glu Trp  Cys Arg Lys Asn Lys  Met Leu Ile Ser Asn  Phe Met Tyr 
    1145                 1150                 1155             


Thr Leu  Asn Glu His Leu Lys  Asp Cys Ala Thr Thr  Cys Asn Leu 
    1160                 1165                 1170             


Arg Lys  Arg Glu Phe Arg Asp  Lys His Lys Trp Leu  Leu Ser Val 
    1175                 1180                 1185             


Leu Asn  Arg Leu Thr Glu Gly  Phe Thr Thr Tyr Gly  Val Gln Asn 
    1190                 1195                 1200             


Asp Ile  Thr Arg Ala Leu Leu  Asp Met Arg Lys Ser  Met Leu Ala 
    1205                 1210                 1215             


Val Lys  Leu Gly Gln Glu Tyr  Gln Asn Thr Cys Ala  Arg Glu Glu 
    1220                 1225                 1230             


Pro Leu  Gly Val Leu Leu Arg  Gly Glu Pro Gly Gln  Gly Lys Ser 
    1235                 1240                 1245             


Phe Met  Thr His Leu Leu Val  Arg Ser Val Cys Asn  Ala Met Gly 
    1250                 1255                 1260             


Trp Lys  Val Ser Glu Ser Val  Phe Ser His Pro Thr  Ser Ser Glu 
    1265                 1270                 1275             


Phe Phe  Asp Gly Tyr Ala Gly  Gln Pro Ile His Leu  Ile Asp Asp 
    1280                 1285                 1290             


Phe Gly  Gln Asn Val Glu Glu  Pro Glu Tyr Lys Val  Leu Cys Gln 
    1295                 1300                 1305             


Cys Met  Ser Ser Ile Pro Phe  Ser Val Pro Met Ala  Ser Leu Glu 
    1310                 1315                 1320             


Glu Lys  Gly Leu Pro Tyr Thr  Ser Lys Leu Val Ile  Ala Thr Thr 
    1325                 1330                 1335             


Asn Lys  Ser Asp Trp Ser Ser  Arg Thr Leu Cys Ala  Pro Gly Ala 
    1340                 1345                 1350             


Leu Lys  Arg Arg Phe Pro Ile  Val Tyr Thr Val Arg  Ala Arg Arg 
    1355                 1360                 1365             


Thr Leu  Thr Lys Asn Gly Leu  Leu Asp Val Asn Ala  His Met Ser 
    1370                 1375                 1380             


Ala Val  Arg Asp Gly Ala Ala  Trp Glu Tyr Thr Thr  Asn Gly Tyr 
    1385                 1390                 1395             


Asp Trp  Gln Pro Phe Ser Val  Asn Asp Leu Ala Ala  Glu Ile Ile 
    1400                 1405                 1410             


Lys Gln  Leu Glu Gln Arg Arg  Glu Ser Phe Gln Leu  Trp Asn Ser 
    1415                 1420                 1425             


Phe Ile  Ser Gln Ala Pro Glu  Thr Phe Glu Ala Trp  Cys Asp Asp 
    1430                 1435                 1440             


Met Val  Ser Leu Leu Gly Pro  Ala Val Pro Val Ala  Ser Val Phe 
    1445                 1450                 1455             


Asp Tyr  Cys Ala Ser Thr Gly  Val Val Pro Met Leu  Lys Gln Ala 
    1460                 1465                 1470             


Ser Glu  Ser Val Leu Lys Trp  Phe Asp Ser Cys Val  Asp Ser Met 
    1475                 1480                 1485             


Val Ser  Phe Val Thr Arg Asn  Lys Lys Trp Ile Ala  Phe Gly Ala 
    1490                 1495                 1500             


Leu Thr  Met Ser Val Leu Gly  Ile Ala Ile Ser Met  Leu Lys Glu 
    1505                 1510                 1515             


Leu Asp  Ser Gln Arg Pro Tyr  Asn Gln Thr Ala His  Lys Met Pro 
    1520                 1525                 1530             


Val Thr  Lys Leu Thr Arg Gly  Arg Arg Val Leu Val  Ser Gln Gly 
    1535                 1540                 1545             


Pro Tyr  Asn Glu Phe Gln His  Tyr Ser Lys Tyr Cys  Val Phe Leu 
    1550                 1555                 1560             


His Ser  Gly Ser Ile Thr Leu  His Gly Leu Ala Phe  Gly Gly Asn 
    1565                 1570                 1575             


Ser Phe  Leu Phe Tyr Thr His  Gly Leu Ala Thr Leu  Glu Arg Tyr 
    1580                 1585                 1590             


Asp Asn  Trp Val Leu Asp Tyr  Asn Gly Ser Met Phe  Asp Leu Asp 
    1595                 1600                 1605             


Ile Glu  Thr Val Asp Glu Leu  Tyr Leu Asn Gly Glu  Ser Met Asp 
    1610                 1615                 1620             


Leu Cys  Leu Ile Thr Cys Lys  Pro Leu Pro Val Thr  Phe Ala Ser 
    1625                 1630                 1635             


Ile Val  Gly His Leu Ser Asp  Gly Asp Leu Gly Asp  Gly Val Ile 
    1640                 1645                 1650             


Leu Trp  Arg Gly Arg Glu Gly  Leu Thr Cys Met Pro  Ile Tyr Asp 
    1655                 1660                 1665             


Leu His  His Tyr Gly Thr Val  Thr Thr Asn Gln Gly  Asp Thr Cys 
    1670                 1675                 1680             


Thr Ser  Ala Ile Arg Tyr Arg  Ala Lys Thr Thr Arg  Gly Met Cys 
    1685                 1690                 1695             


Gly Gly  Leu Val Leu Ser Lys  Ile Ser Gly Thr Tyr  Lys Ala Val 
    1700                 1705                 1710             


Gly Leu  His Val Ala Gly Asn  Gly Val Tyr Gly Val  Ala Ala Ser 
    1715                 1720                 1725             


Leu Ser  Val Cys Lys Gln Leu  Glu Ser Gln Gly Leu  Val Thr Asp 
    1730                 1735                 1740             


Thr Lys  Pro Trp Pro Gly Val  Arg Val His Gln Pro  Ser Lys Ser 
    1745                 1750                 1755             


Val Leu  Lys Pro Ser Pro Leu  Tyr Gly Phe Val Glu  Gln Glu Leu 
    1760                 1765                 1770             


His Pro  Ala Val Leu Ser Pro  Phe Asp Asn Arg Leu  Lys Cys Glu 
    1775                 1780                 1785             


Val Asp  Ser Val Ile Gly Arg  Gln Ala Leu Lys Tyr  Asn Ser Asn 
    1790                 1795                 1800             


Val Phe  Asn Pro Gly Pro Tyr  Tyr Asp Glu Val Leu  Glu Ala Phe 
    1805                 1810                 1815             


Ala Val  Asp Phe Asn Gly Arg  Phe Gly Ile Asn Glu  Met Met Ser 
    1820                 1825                 1830             


Ala Glu  Glu Val Phe Ala Leu  Ser Gly Asp Glu Ala  Ile Glu Leu 
    1835                 1840                 1845             


Ser Thr  Ser Pro Gly Leu Lys  Tyr Thr Ser Lys Gly  Leu Arg Lys 
    1850                 1855                 1860             


Arg Asp  Leu Val Pro Gly Gly  Lys Ala Cys Asp Leu  Leu Leu Ser 
    1865                 1870                 1875             


Asp Val  Glu Arg Leu Met Asn  Asp Pro Lys Gly Thr  Pro Val Tyr 
    1880                 1885                 1890             


Phe Tyr  Cys His Leu Lys Asp  Glu Leu Arg Pro Gln  Glu Lys Ile 
    1895                 1900                 1905             


Glu Gln  Gly Leu Thr Arg Cys  Ile Glu Ser Ser Asp  Phe Asp Tyr 
    1910                 1915                 1920             


Val Phe  Ser Ala Lys Arg Val  Phe Cys Lys Leu Phe  Arg Gln Leu 
    1925                 1930                 1935             


Tyr Asp  Ser Asp Pro Ile Glu  Thr Gly Phe Ala Val  Gly Ile Asn 
    1940                 1945                 1950             


Cys Ile  Ala Asp Trp Lys Asn  Leu Leu Asp Gly Glu  Gln Pro Ser 
    1955                 1960                 1965             


Pro Ser  Ala 
    1970     


<210>  4
<211>  870
<212>  DNA
<213>  Swine Parechovirus-like virus

<400>  4
ggttggggat cggatatgga tgaagctgat cctttggatg acatggaacc aggacatcct       60

gattgtctta cattggaatc taaagatggg agtagtggta aagggcccca gtgtgcgcag      120

atggctggat taacaagtgt ggagaatgat ggcacaactg ataaccaact taattgtgca      180

gcacctaagt ttatcaatat ccataagctg actacttcaa tatttgccaa agatcatatg      240

caccttgatt atttctttgg tcgtggatgg tatgtcatga aacataacta tgagggcgag      300

agccgtgccc ctttttatat tgatgtggat gctccatcgt ctatgccagg cgctgcaatg      360

aatttctttt ctttctgggc tggggaggtt aacttccatg ttgtcaacaa tagtgatgac      420

ccaatggctg tcactcatag ttattcgcat gaggctagca ctgttggtcc cgctgaaggt      480

ctagggttga taattgtgcc gcctcgtgag atgatatcat ttgcagcccc tttctattcc      540

tggtcgccat tgcggactgt gcttgctcac caaaatagtg cagttaagcg cacgtttggc      600

attttgaagt tagtgcctga ggctccaaaa ggacaggtca ttgtttatgc atcacttaga      660

actccatgct tcttcttagt caagccattt cctatacaga caactgcagc taagatggct      720

gtgtatccat caaagctgac atcagctgag gaggcagagg agctaaagtt caaattggtg      780

catgagcctt atgagcagtt ttttatcccc cattatgggg atattcctag ttttcaaagg      840

gattttatta attggctagg cagtaaagaa                                       870


<210>  5
<211>  290
<212>  PRT
<213>  Swine Parechovirus-like virus

<400>  5

Gly Trp Gly Ser Asp Met Asp Glu Ala Asp Pro Leu Asp Asp Met Glu 
1               5                   10                  15      


Pro Gly His Pro Asp Cys Leu Thr Leu Glu Ser Lys Asp Gly Ser Ser 
            20                  25                  30          


Gly Lys Gly Pro Gln Cys Ala Gln Met Ala Gly Leu Thr Ser Val Glu 
        35                  40                  45              


Asn Asp Gly Thr Thr Asp Asn Gln Leu Asn Cys Ala Ala Pro Lys Phe 
    50                  55                  60                  


Ile Asn Ile His Lys Leu Thr Thr Ser Ile Phe Ala Lys Asp His Met 
65                  70                  75                  80  


His Leu Asp Tyr Phe Phe Gly Arg Gly Trp Tyr Val Met Lys His Asn 
                85                  90                  95      


Tyr Glu Gly Glu Ser Arg Ala Pro Phe Tyr Ile Asp Val Asp Ala Pro 
            100                 105                 110         


Ser Ser Met Pro Gly Ala Ala Met Asn Phe Phe Ser Phe Trp Ala Gly 
        115                 120                 125             


Glu Val Asn Phe His Val Val Asn Asn Ser Asp Asp Pro Met Ala Val 
    130                 135                 140                 


Thr His Ser Tyr Ser His Glu Ala Ser Thr Val Gly Pro Ala Glu Gly 
145                 150                 155                 160 


Leu Gly Leu Ile Ile Val Pro Pro Arg Glu Met Ile Ser Phe Ala Ala 
                165                 170                 175     


Pro Phe Tyr Ser Trp Ser Pro Leu Arg Thr Val Leu Ala His Gln Asn 
            180                 185                 190         


Ser Ala Val Lys Arg Thr Phe Gly Ile Leu Lys Leu Val Pro Glu Ala 
        195                 200                 205             


Pro Lys Gly Gln Val Ile Val Tyr Ala Ser Leu Arg Thr Pro Cys Phe 
    210                 215                 220                 


Phe Leu Val Lys Pro Phe Pro Ile Gln Thr Thr Ala Ala Lys Met Ala 
225                 230                 235                 240 


Val Tyr Pro Ser Lys Leu Thr Ser Ala Glu Glu Ala Glu Glu Leu Lys 
                245                 250                 255     


Phe Lys Leu Val His Glu Pro Tyr Glu Gln Phe Phe Ile Pro His Tyr 
            260                 265                 270         


Gly Asp Ile Pro Ser Phe Gln Arg Asp Phe Ile Asn Trp Leu Gly Ser 
        275                 280                 285             


Lys Glu 
    290 


<210>  6
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.532.F

<400>  6
gcttttgacc agtggctctg g                                                 21


<210>  7
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.532.R

<400>  7
agccgtagga gcagcactat g                                                 21


<210>  8
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.567.F

<400>  8
tgatactgct gaatctggcg g                                                 21


<210>  9
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.567.R

<400>  9
acccgcagtc agaagaatca g                                                 21


<210>  10
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.610.F

<400>  10
tcaggtcaat gctgctgcag g                                                 21


<210>  11
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.610.R

<400>  11
agctgtgaac ggtagcaaag g                                                 21


<210>  12
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.593.F

<400>  12
ctagtgttgc aggcacgaga g                                                 21


<210>  13
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.593.R

<400>  13
cttgacagtg tcaccgcatg g                                                 21


<210>  14
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.747.F

<400>  14
gttgaaaccc gattggctca c                                                 21


<210>  15
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.747.R

<400>  15
ggagcctcag gcactaactt c                                                 21


<210>  16
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.483.F

<400>  16
tattcctggt cgccattgcg g                                                 21


<210>  17
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.578.R

<400>  17
ccccatacgt ggtaaaaccc t                                                 21


<210>  18
<211>  22
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.808.F

<400>  18
cccccattat ggggatattc ct                                                22


<210>  19
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.808.R

<400>  19
atttcaggag ggtacgatcc c                                                 21


<210>  20
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.578.F

<400>  20
cttctgctat ggagttgctg g                                                 21


<210>  21
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.578.R

<400>  21
ccccatacgt ggtaaaaccc t                                                 21


<210>  22
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.529.F

<400>  22
ttgaaggatt gtgccaccac c                                                 21


<210>  23
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.529.R

<400>  23
gctagcgcaa tagtcgaaca c                                                 21


<210>  24
<211>  20
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.620.F

<400>  24
ccttcttggc cctgctgttc                                                   20


<210>  25
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.620.R

<400>  25
gacaccatct ccaaggtctc c                                                 21


<210>  26
<211>  22
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.550.F

<400>  26
gggtgcttga ctataatggg tc                                                22


<210>  27
<211>  22
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.550.R

<400>  27
tgccaatcac agagtcaacc tc                                                22


<210>  28
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.703.F

<400>  28
caaggactag tcaccgacac c                                                 21


<210>  29
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Primer SPeV.703.R

<400>  29
ggcacttgga gaaggttgct c                                                 21


<210>  30
<211>  52
<212>  PRT
<213>  artificial

<220>
<223>  Contig3177

<400>  30

Asn Ser Ser Ala Met Glu Leu Leu Gly Asn Asp Val Ser Lys Ser Ile 
1               5                   10                  15      


Leu Cys Cys Leu Val Arg Phe Val Ala Val Leu Val Met Phe Phe Arg 
            20                  25                  30          


Asn Pro Asp Leu Ile Asn Gly Val Ala Leu Ala Ser Tyr Leu Ala Ser 
        35                  40                  45              


Glu Phe Ser Ser 
    50          


<210>  31
<211>  83
<212>  PRT
<213>  artificial

<220>
<223>  Contig13129

<400>  31

Leu Asn Gly Glu Ser Met Asp Leu Cys Leu Ile Thr Cys Lys Pro Leu 
1               5                   10                  15      


Pro Val Thr Phe Ala Ser Ile Val Gly His Leu Ser Asp Gly Asp Leu 
            20                  25                  30          


Gly Asp Gly Val Ile Leu Trp Arg Gly Arg Glu Gly Leu Thr Cys Met 
        35                  40                  45              


Pro Ile Tyr Asp Leu His His Tyr Gly Thr Val Thr Thr Asn Gln Gly 
    50                  55                  60                  


Asp Thr Cys Thr Ser Ala Ile Arg Tyr Arg Ala Lys Thr Thr Arg Gly 
65                  70                  75                  80  


Met Cys Gly 
            


<210>  32
<211>  224
<212>  PRT
<213>  artificial

<220>
<223>  Contig51104

<400>  32

Val Val Asp Thr Leu Thr Lys Glu Val Ser Gln Thr Leu Leu Gly Asp 
1               5                   10                  15      


Thr Ala Glu Ser Gly Gly Gly Phe Gly Gly Val Leu Ser Gly Ser Ala 
            20                  25                  30          


Thr Thr Asn Ala Ala Asn Ile Val Gln His Ser Ala Ala Pro Thr Ala 
        35                  40                  45              


Pro Ala Asn Pro Val Leu Asp Ala Asn Asp Pro Tyr Glu Ala Cys Ala 
    50                  55                  60                  


Tyr Ser Lys Glu Thr Ser Arg Glu Thr Pro Ser Lys Met Val Leu Leu 
65                  70                  75                  80  


Asp Ile Val His Phe Asp Asn Thr Trp Val Trp Gly Gly Asn Asp Lys 
                85                  90                  95      


Leu Gln Leu Pro Leu Pro Lys Cys Phe Trp Lys Asn Arg Ser Phe Pro 
            100                 105                 110         


Ala Tyr Gly Thr Ser Arg Tyr Phe Gln Phe Phe Arg Gly Ser Phe His 
        115                 120                 125             


Ile Lys Ile Gln Val Asn Ala Ala Ala Gly Ser Ala Gly Ser Phe Val 
    130                 135                 140                 


Val Val Tyr Val Pro Asn Asp His Tyr Gln Ser Trp Asn Asn Lys Asp 
145                 150                 155                 160 


Leu Ile Leu His Thr Met Phe Asn Trp Pro His Val Ile Phe Asn Val 
                165                 170                 175     


Ala Thr Met Thr Glu Ala Asp Leu Tyr Ile Pro Tyr Ile Asn Thr His 
            180                 185                 190         


Asn Leu Ala Asn Thr Asp Ser Ser Asp Cys Gly Trp Val Val Val Thr 
        195                 200                 205             


Pro Phe Thr His Leu Glu Val Ala Ser Thr Thr Thr Asn Thr Leu Asp 
    210                 215                 220                 


<210>  33
<211>  85
<212>  PRT
<213>  artificial

<220>
<223>  Contig51912

<400>  33

Thr Leu Asp Ile Ala Val Phe Gly Ser Leu Val Asp Phe Gln Phe Gln 
1               5                   10                  15      


Gly Pro Arg Pro Tyr Thr Asp Leu Pro Ser Asp Ser Gln Gly Pro Lys 
            20                  25                  30          


Arg Val Ala Arg Asn Lys Lys Tyr Lys Tyr Thr Arg Asn Lys Ile Asp 
        35                  40                  45              


Ile Ala Glu Gly Pro Gly Ser Met Asn Ile Ala Asn Val Leu Ser Thr 
    50                  55                  60                  


Thr Ala Ala Gln Ser Ile Ala Leu Val Gly Glu Arg Ala Phe Ile Asp 
65                  70                  75                  80  


Pro Ser Val Ala Gly 
                85  


<210>  34
<211>  73
<212>  PRT
<213>  artificial

<220>
<223>  Contig52512

<400>  34

Lys Glu Thr Leu Gly Ser Tyr Pro Pro Glu Met Asn Pro Phe Glu Ser 
1               5                   10                  15      


Gln Ser Leu Ala Ala Phe Asn Ala Leu Ser Leu Ser Ala Arg Asn Cys 
            20                  25                  30          


Thr Trp Trp Ile Glu Leu Phe Gln Lys Leu His Thr Phe Val Arg Asp 
        35                  40                  45              


Leu Leu Lys Pro Asp Thr Ser Ala Lys Phe His Glu Trp Cys Arg Lys 
    50                  55                  60                  


Asn Lys Met Leu Ile Ser Asn Phe Met 
65                  70              


<210>  35
<211>  286
<212>  PRT
<213>  artificial

<220>
<223>  Contig53438

<400>  35

Leu Val Ile Ala Thr Thr Asn Lys Ser Asp Trp Ser Ser Arg Thr Leu 
1               5                   10                  15      


Cys Ala Pro Gly Ala Leu Lys Arg Arg Phe Pro Ile Val Tyr Thr Val 
            20                  25                  30          


Arg Ala Arg Arg Thr Leu Thr Lys Asn Gly Leu Leu Asp Val Asn Ala 
        35                  40                  45              


His Met Ser Ala Val Arg Asp Gly Ala Ala Trp Glu Tyr Thr Thr Asn 
    50                  55                  60                  


Gly Tyr Asp Trp Gln Pro Phe Ser Val Asn Asp Leu Ala Ala Glu Ile 
65                  70                  75                  80  


Ile Lys Gln Leu Glu Gln Arg Arg Glu Ser Phe Gln Leu Trp Asn Ser 
                85                  90                  95      


Phe Ile Ser Gln Ala Pro Glu Thr Phe Glu Ala Trp Cys Asp Asp Met 
            100                 105                 110         


Val Ser Leu Leu Gly Pro Ala Val Pro Val Ala Ser Val Phe Asp Tyr 
        115                 120                 125             


Cys Ala Ser Thr Gly Val Val Pro Met Leu Lys Gln Ala Ser Glu Ser 
    130                 135                 140                 


Val Leu Lys Trp Phe Asp Ser Cys Val Asp Ser Met Val Ser Phe Val 
145                 150                 155                 160 


Thr Arg Asn Lys Lys Trp Ile Ala Phe Gly Ala Leu Thr Met Ser Val 
                165                 170                 175     


Leu Gly Ile Ala Ile Ser Met Leu Lys Glu Leu Asp Ser Gln Arg Pro 
            180                 185                 190         


Tyr Asn Gln Thr Ala His Lys Met Pro Val Thr Lys Leu Thr Arg Gly 
        195                 200                 205             


Arg Arg Val Leu Val Ser Gln Gly Pro Tyr Asn Glu Phe Gln His Tyr 
    210                 215                 220                 


Ser Lys Tyr Cys Val Phe Leu His Ser Gly Ser Ile Thr Leu His Gly 
225                 230                 235                 240 


Leu Ala Phe Gly Gly Asn Ser Phe Leu Phe Tyr Thr His Gly Leu Ala 
                245                 250                 255     


Thr Leu Glu Arg Tyr Asp Asn Trp Val Leu Asp Tyr Asn Gly Ser Met 
            260                 265                 270         


Phe Asp Leu Asp Ile Glu Thr Val Asp Glu Leu Ser Leu Asn 
        275                 280                 285     


<210>  36
<211>  84
<212>  PRT
<213>  artificial

<220>
<223>  Contig59674

<400>  36

Val Ala Gly Asn Gly Val Tyr Gly Val Ala Ala Ser Leu Ser Val Cys 
1               5                   10                  15      


Lys Gln Leu Glu Ser Gln Gly Leu Val Thr Asp Thr Lys Pro Trp Pro 
            20                  25                  30          


Gly Val Arg Val His Gln Pro Ser Lys Ser Val Leu Lys Pro Ser Pro 
        35                  40                  45              


Leu Tyr Gly Phe Val Glu Gln Glu Leu His Pro Ala Val Leu Ser Pro 
    50                  55                  60                  


Phe Asp Asn Arg Leu Lys Cys Glu Val Asp Ser Val Ile Gly Arg Gln 
65                  70                  75                  80  


Ala Leu Lys Tyr 
                


<210>  37
<211>  463
<212>  PRT
<213>  artificial

<220>
<223>  Contig77653

<400>  37

Trp Gln Ala Ser His Ala Pro Thr Thr Lys Ser Pro Ile Phe Gly Arg 
1               5                   10                  15      


Gly Tyr Lys Ile Arg Glu Leu Gly Asn Leu Gly Pro Leu Ser Thr Ala 
            20                  25                  30          


Tyr Gln Phe Trp Arg Gly Ser Ile Ile Phe Thr Leu Thr Ile Phe Ala 
        35                  40                  45              


Ser Ser Phe His Arg Gly Arg Leu Arg Ile Val Leu Phe Pro Asn Gly 
    50                  55                  60                  


Thr His Ser Phe Ser Gln Asp Asp Ala Asn Ala Leu Ile Phe Thr Val 
65                  70                  75                  80  


Cys Asp Ile Gly Glu Gln Ser Ser Phe Asp Ile Thr Leu Pro Phe Thr 
                85                  90                  95      


His Tyr Asn Trp Ile Arg Glu Cys Asp Asn Ser Val Val Val Leu Val 
            100                 105                 110         


Asn Val Tyr Val Glu Thr Arg Leu Ala His Asn Asn Ala Ser Ser Asn 
        115                 120                 125             


Val Ile Lys Cys Ala Leu Phe Val Arg Gly Gly Glu Asp Phe Glu Phe 
    130                 135                 140                 


Leu Ala Pro Cys Gly Asp Thr Val Lys Phe His Gly Trp Gly Ser Asp 
145                 150                 155                 160 


Met Asp Glu Ala Asp Pro Leu Asp Asp Met Glu Pro Gly His Pro Asp 
                165                 170                 175     


Cys Leu Thr Leu Glu Ser Lys Asp Gly Ser Ser Gly Lys Gly Pro Gln 
            180                 185                 190         


Cys Ala Gln Met Ala Gly Leu Thr Ser Val Glu Asn Asp Gly Thr Thr 
        195                 200                 205             


Asp Asn Gln Leu Asn Cys Ala Ala Pro Lys Phe Ile Asn Ile His Lys 
    210                 215                 220                 


Leu Thr Thr Ser Ile Phe Ala Lys Asp His Met His Leu Asp Tyr Phe 
225                 230                 235                 240 


Phe Gly Arg Gly Trp Tyr Val Met Lys His Asn Tyr Glu Gly Glu Ser 
                245                 250                 255     


Arg Ala Pro Phe Tyr Ile Asp Val Asp Ala Pro Ser Ser Met Pro Gly 
            260                 265                 270         


Ala Ala Met Asn Phe Phe Ser Phe Trp Ala Gly Glu Val Asn Phe His 
        275                 280                 285             


Val Val Asn Asn Ser Asp Asp Pro Met Ala Val Thr His Ser Tyr Ser 
    290                 295                 300                 


His Glu Ala Ser Thr Val Gly Pro Ala Glu Gly Leu Gly Leu Ile Ile 
305                 310                 315                 320 


Val Pro Pro Arg Glu Met Ile Ser Phe Ala Ala Pro Phe Tyr Ser Trp 
                325                 330                 335     


Ser Pro Leu Arg Thr Val Leu Ala His Gln Asn Ser Ala Val Lys Arg 
            340                 345                 350         


Thr Phe Gly Ile Leu Lys Leu Val Pro Glu Ala Pro Lys Gly Gln Val 
        355                 360                 365             


Ile Val Tyr Ala Ser Leu Arg Thr Pro Cys Phe Phe Leu Val Lys Pro 
    370                 375                 380                 


Phe Pro Ile Gln Thr Thr Ala Ala Lys Met Ala Val Tyr Pro Ser Lys 
385                 390                 395                 400 


Leu Thr Ser Ala Glu Glu Ala Glu Glu Leu Lys Phe Lys Leu Val His 
                405                 410                 415     


Glu Pro Tyr Glu Gln Phe Phe Ile Pro His Tyr Gly Asp Ile Pro Ser 
            420                 425                 430         


Phe Gln Arg Asp Phe Ile Asn Trp Leu Gly Ser Lys Glu Glu Leu Gln 
        435                 440                 445             


Asn Met Ile Leu Gln Cys Gly Asp Val Glu Gln Asn Pro Gly Pro 
    450                 455                 460             


<210>  38
<211>  44
<212>  PRT
<213>  artificial

<220>
<223>  Contig67601

<400>  38

Val Phe Ser Val Lys Arg Val Phe Cys Lys Leu Phe Arg Gln Leu Tyr 
1               5                   10                  15      


Asp Ser Asp Pro Ile Glu Thr Gly Phe Ala Val Gly Ile Asn Cys Ile 
            20                  25                  30          


Ala Asp Trp Lys Asn Leu Leu Asp Gly Glu Gln Pro 
        35                  40                  


<210>  39
<211>  7592
<212>  DNA
<213>  Ljungan virus

<400>  39
ggtggggtgg gtacgtctct cgctcattga gtgggggcgt ggctcaccaa ccacacctgg       60

ttggtcccca ggttcatgca ataaccactt tttgtaatct ttacatctaa gcttaattca      120

cccactagaa ctggacgaaa ccgcttggaa taagtttggt tctctcttga gtgtgttttg      180

tgttagcata atttctgtct ctagagtgct ttacactcta gtaggggctg tacccgggcg      240

gtcccactct tcacaggaat ctgcacaggt ggctttcacc tctggacagt gcattccata      300

cccgctccac aatagaagat gatgtatatc tttgtttgtg aaatgctcat gaaacgtgtg      360

tgtaggcgta gcggctactt gaatgccagc ggaacccccc tagtggtaac actagcctct      420

gggcccaaaa ggcatgtctc tgaccattca agtacacaac cccagtgata cacacattta      480

gtaatggctc agtaatggac attgattgat catcagacaa ttgttaggag gcctaggtat      540

gacgggctga aggatgccct ggaggtaccc gcaggtaacc ttaagagact gtggatctga      600

ccaggggccc accatggaaa catgggtaga agtcttcgga ccttgggtta aaaaacgtct      660

aggcccgccc cccacaggga tgtggggttt cccttataac cccaatatca cattatggct      720

gcaaccaaga tgaatcccgt tgagaatctt ctttctactg tctcctccac cgttggctca      780

ctgctacaaa atcccaccat ggaagaaaag gaaatggact cagatcgtgt tgcggcatcc      840

accactacta acgctggaaa tgtagttcag gcttcagttg cccccaccat gccaattaaa      900

ccagatttca agaacacgga taactttttg tcaatgagtt atagcccaaa tactgcacct      960

acaaatccaa caaaaatggt acatttggct aatggaacat ggactacatc gcagcatcga     1020

cagtctttgg ttgcatcgat tcagctacca caggcatttt ggcccaatga acgctatccg     1080

gcttggggtc aatcacgcta ttttgctgca gtccgatgtg gctttcatat tcaggttcaa     1140

ttgaatgtta acattggctc agcaggttgt ttgatagctg cctatatgcc caaaagtgca     1200

catgatcata tggatacata tacatttagt tcctacacca atttgcctca tgttctgatg     1260

aatgctgcca ccacgtctca ggctgatttg tatataccct atgtgcataa tcataattat     1320

gcaaagacag attcagatga cttgggtggt atatacattt ggtgttggtc tgccctcaca     1380

gttccatcag gttctccgac aactgttgat gtcacaattt ttggctcctt gcttgacttg     1440

gacttccagt gccctagacc accaggtgct aatactgtca tatttacaca aggcaaaaga     1500

actgccagga aaaccaaagc aacaaaattt aaatggacaa ggaataaaat agacattgct     1560

gaaggtcctg gcgctcttaa tattgccaat gtcttgtcta ctacaggggg ccaaactgtt     1620

gccctcgttg gggaaagagc tttctacgat cccagaactg caggagccgc tgtgcggtgt     1680

aaggatttga tggaaattgc cagaatgcca tcagtctata agggggagag aactgaacct     1740

ggaggaacta atggctattt tcaatggtct catacgcact cccctataaa ttgggttttt     1800

gacgggggaa ttcatttgga agacatgccc aatctaaatt tgttttcctc atgctataac     1860

tattggagag gctcaattgt tttgaaactc actgtgtatg catcaacctt taacaagggt     1920

agattgagaa tggccttctt cccaaatcat gatgcaaggt acacagagga agaagcacaa     1980

aatgccatct tcatggtgtg tgatattggg ctcaacaaca cttttgaaat gaccatccca     2040

tacacctggg gaaactggat gagaccaact aggggatctg tcattggatg gcttaggatt     2100

gatgttttga atcgcctcac ttataacagt tcctcaccca atgctgttaa ttgcattctt     2160

caggttaaaa tggggaatga tgccaaattt atggtaccca ccacatctaa cattgtgtgg     2220

gaaggtctcc actcatgggg gtctgagatg gacttactgg acagtttgga taatccagaa     2280

gagattcaag atatggagga accagaatct gaaaatgtgg aggccgcaca aggagaggaa     2340

gccgccactg ccgttggcct tcgagccacc gaaaatgatg gatccctatc tgaacaacaa     2400

aacatggcac aaccaatgtt tttgaatttt aagcaacata gagtggacat ttactctgct     2460

tcccacacca aagttgacca tatttttggt agggcgtggg cagtgggaat ttttaatgtg     2520

actaatgcta atatatccaa atttgacctt aactttccca caaccacaca tggtgcattg     2580

tgtcgcttct tctgtttctg gacgggagag cttaacttgc atattttgaa catttcttct     2640

tccaatgctc cagtcaaagt tgctcacaca tggtttggca cagattcagg cattgccagg     2700

actgcaactt tggaatcaaa cggggttatc atcataccac caaatgagca aatgacactc     2760

tgcataccct attattctga ggcaccattg cgctgtgtta aggggccaca ttcagctggt     2820

gctggattgg gctcaatttt cacacagtgt attggcaaca gcgttaataa caggattcaa     2880

atttttgtta gttttcgctg cccaaacttc ttttttcccc ttcctgcacc ccatgaggct     2940

tcttcaaggt caattttgca gagaatttcc actgctagcg cagatgagtt agaagctgtc     3000

ttggacgcaa aaacacctga tgctcctgtg cgcttgtgct accaaccaga ggatcctttg     3060

agacaactta gggaggcagc taaggcatat ttcaatatta tgcacaatga tgagatggac     3120

tattctggag gtaaattctt gaatcagtgt ggtgatgtgg agtccaatcc aggtcctgat     3180

attgaattag tctataagaa cagaggcttt tataaacatt atggggttag gtttggtggc     3240

tttatttacc atcttaattc acaagacatt ttgtcgacag ccatcactgg aaaatcagac     3300

ttcataaaag aggaagatga tggtaaatgg acacatgcta tgactgcacc cctggattat     3360

tttactgaga agtatgtgaa atcaatggtt ggttcaaaac acattttttc cgccacatca     3420

aattgtgaaa ccattgccag ggatttgttt ccaggaaaga aggagattag tcaatctaaa     3480

gctttgggta ttattggtgt gatccttctt tctgcatctc ttttatccct acttgccgtt     3540

ccatgggatt attcctcact tcagacagtt tataatcaat caattgaagg ggatgcttca     3600

ggcttaacac ttttgagcca gagatgcatg actttttttt ccaataccat gtgtgaaact     3660

tttaataatg atcttgtgaa gtttataatt aagattttag ttaggcttct ttgctatatt     3720

gttctttatt gtcatgcccc taatatgctt acaacaatgt gtttaggcac ccttttggtt     3780

ttggatatta ccacatgtga gattttatca gccaatacaa aggccctgtt tcaagctctt     3840

cttgatggag acgtcaagaa tttggtttgg aagattgcag agaacatgca gtttgcccag     3900

tctacagatg agcaggcaga ggaaatggct gccacctttt catttgccaa agacatggtt     3960

gacattcatc caattggggc tgagccattt caaaaccaag gctttaggga gtttaatgat     4020

gtgtcaatgt cctttcgcca cattgaatgg tggcttacaa tgtttaagaa agtttacaat     4080

gttcttaagg gcattttctc tccatccatt gagcagaaag cggtggcgtg gttggatcgc     4140

aaccaagaat atgttgcatc aatcttagat cattgctctg acatgattat ccgcatgaaa     4200

gacccaaaac aacagcggaa ccccaagacc attgaagaat attttgatgt gttaaagaaa     4260

atgaagccct tggtgtcact ctgcattaaa gttgccccgt caacaaagtt ttcatcccaa     4320

gtgtttaggt tgtattcaga gctaatgaag gttaatgtta gagtgccggt taacacagat     4380

ctcacacgca ttgagccaat tggtgtgtgg atctccagtg agccaggtca gggaaaatct     4440

ttctttactc acatgcttag cacttcactt ttgaaaagtt gtaatttgga tggggtgtat     4500

accaatgcca caggctctga gtttatggat ggatatgttg gtcaagatat acacattatt     4560

gatgatgcag gacaaaatcg ggaagagaag gatttggctc tgctgtgcca gtgcatctca     4620

tctgtgccat ttactgtacc tatggctgat ctaacagaga aagggacatt ttataccagc     4680

aagattgtta ttgccacaac caacaagagt gatttcaatt gcatggtttt gacagatcca     4740

gctgctctag agaggcgttt cccatttaat ttgagaatta gggcagttaa aagttttatg     4800

aataaggaca gaaagttgga tgtgccaaga tcaatgggag ccatggcaga tggatcctgc     4860

tgggagtgct ctatggacta tggcagaacc tggaacaccg tggtgatgag agatcttgtg     4920

aaacaaataa cagaaatgta taaacaaaga gatgatgccc tgactgtttg gaagtataag     4980

ttaaatcaga ttaggaatga gatgtcccct ggtgactcaa ttggccgcat tctcgatcca     5040

atggaggaga cactctgttc attggagcgc aggtttggcc agttggcaga tagtcttaga     5100

gaaaattacc ataggacagc tgatgaacta attgaagtta tagaagacat gatggcacca     5160

gggaatagtc cctttgcatg cttcgaaagt gtagcaccat cacttaaacc aagaacagct     5220

tgtcaaaaag ttaaagattg ggtaaaacaa cacatgatta gatggggcaa ctttgtgatg     5280

aggaataaag gctggtttac acttttttct gtactttcat cttttctttc aattcttact     5340

cttgtttatt tacattataa aaaagagaaa aaagaggaag aaagacaaga gcgggcttac     5400

aaccctcaaa ctgcaactcc caagaagggg ggtaagccaa agctctcttt ggtaaaaact     5460

acaaatttta taaatgaggc accatatatg caggatttgg aacactgctt tgcccaaaca     5520

gcctacattt catccccaga gactcaggat ataattcatt gtgctgcctt gtgtgaggat     5580

accattttgg tttatggaca ttcacaattt tattttaacc gctatgaaga tttgcggtta     5640

cattttaaag gagccatttt tcctattgag ggtggaaaaa tttcacaagt tactgtgaat     5700

gggcagccga tggatttgat tcttgttaaa atagacaaac ttcccataac ctttaaaaat     5760

tataccaaat attacacaac tgaaattggg aaggaaactc ttttaatttg gaattctgag     5820

aaagggagac tggctatgcc agtccaatgt gttgccccgg ctggaccggt ggaaacaatg     5880

gaaggcacca tcactcataa aacctattcc tacaaagtgg catcaaagaa aggcatgtgc     5940

ggtggactcc tagttactag agtgaatgga acatttaagg ttttggggat gcacattgct     6000

gggaacggac aggttgcgcg ggccgcagca gttcacttca tttcaaatgg ggctagtggt     6060

tttatggatc agggggttgt ggttgcaaaa gagaagatgc agaaaccaat ttatttgcca     6120

tctaaaacag cactaaatcc tagccctttg aatggtgttg tgcccgtgaa gatggagcct     6180

gcagttctta gccctcatga tgttagactt gaagtgatta tgccaagcgt ggttaaaaat     6240

gcagcagcca agtacagagt taacatcttc aacccagatt ttgaaatctg ggagagggtg     6300

gttgatgaat tgaaagcaag gtttcgatct aagcttggca tacacaaaca tgtttctctt     6360

caaaaggctg tgcaaggttt ttcctccctt tcgtctcttg atctttctac ctctccaggg     6420

caaaagtatg ttgaaaaagg aatgaagaaa agggatcttt tgtccactga accattttgg     6480

atgcatcctc aattggaaag tgatgttaaa gatatacttg gggcagttta ttctggtaag     6540

aaaccccaca cattttttgc tgcccacttg aaagatgagt tgcgcaagaa ggaaaagatt     6600

gcgcaaggaa agacccgctg cattgaagca tgttcaattg attatgttat tgcctataga     6660

gttgtgatgt cctctctcta tgaggcaatt tatcaaaccc cagctcaaga attgggcttg     6720

gcagtgggaa tgaatccctg gacagattgg gatccaatga ttaatgtttt gcagccttat     6780

aattatggtt tagattattc atcctatgat ggcagtcttt ctgaacagtt aatgagatat     6840

ggtgttgaaa tacttgctta ttgtcatgag caaccagaag ctgtgatgat tctccatgag     6900

ccagttataa attcgcaaca ccttgtgatg gatgaaatct ggcatgtaaa tggaggaatg     6960

ccctcaggag ccccatgtac aactgtgcta aactctatat gtaatttgct ggtttgtaca     7020

tatttggctt atgagcagag tttggacatt gaggtgttgc ctattgttta tggggatgat     7080

gtgatttttt ctgtttcttc accattggat gctgaatatt tggttcagag cgctgcccaa     7140

aattttggaa tggaagtgac atcatcagat aaatctggcc ccccaaaact tttgaaaatg     7200

gatgagattg aatttttaaa gaggacaaca aaattttttc ccggctccac ctataaggtg     7260

ggggccttga gcctggatac catggaacaa cacattatgt ggatgaagaa tctggaaacc     7320

tttccagaac aacttgttag ctttgaaaat gagttggtgt tgcatgggaa agaaatttat     7380

gatgattata aaaataggtt taatcctatt ttgaatcaat ggcgagtgtg catgcaggac     7440

tatgaagtgg ctctgcatcg catgctacgc tatgtttttg attagattga tttagtttga     7500

ttttgatttt attagtttta ttttaggtta gaattagatt attttagttt agttttaagg     7560

attttgattt gattgaattt ggcccaccaa tc                                   7592


<210>  40
<211>  7320
<212>  DNA
<213>  Human parechovirus type 1

<400>  40
cgtcgggcct tataccccga cttgctgagc ttctctagga gagtcccttt cccagccctg       60

aggcggctgg tcaataaaag cctcaattgt aacaaacatc taagattatt aaattaaccc      120

catgcctggt ctccactagt tgaaggcaac ttgcaataaa atgagtggaa acaagacgct      180

taaagcatgg tgtaaattaa tttttctagc ccacactttg tgtggggtgg cagatggcgt      240

gccataattc tattagtgag ataccacgct tgtggacctt atgctcacac agccatcctc      300

tagtgagttt gtgcgacgtc tggtgacgtg tgggaactta ttggaaacaa cattttgctg      360

taaagcatcc tattgccagc ggaacaacac ctggtaacag gtgcctctgg ggccaaaagc      420

caaggtttaa cagacccttt aggattggtt ataaacctga aatgttgtgg aagatactta      480

gtacctaccg atctggtagt agtgcaaaca ctagttgtaa ggcccacgaa ggatgcccag      540

aaggtaccca taggtaacaa gtgacactat ggatctgatc tggggtcagg tacctctatc      600

ttggtgacct ggttaaaaaa cgtctagtgg gccaaacccg ggggggatcc ccggtttcct      660

tttgttttac taatgctact atggagacaa ttaagaatat tgcagatatg gcaactggag      720

tagtcagttc agttgattca accatcaatg cagttaacga gaaggtggaa aatgtaggaa      780

atgagattgg aggtaattta ttgaccaaag ttgcagatga tgcatctaat gtgcttggac      840

caaattgtta tgctacaaca gctgagccag agaataaaga tgtagtacag gcaactacaa      900

ctgttaacac gactaatttg acacaacatc cctcagcacc aacaatgccc ttcacccctg      960

atttctccaa tgttgacact tttcactcaa tggcatatga tatcactact ggggagaaaa     1020

atcctagcaa attggttagg ttggagactc atgagtggac accaacctgg gctagaggac     1080

accaaataac ccatgtggaa ttaccaaaag tcttttggga caaaaatagt aagccagcct     1140

atggccaatc gaggtacttt gcagcagtac ggtgtggttt ccattttcag gtgcaagtga     1200

atgttaatca aggaacagct ggtagtgcat tggtggtgta tgaacccaaa cctgttgtga     1260

catatgacac aaagttagaa tttggagcat ttaccaattt gccacatgtg ttgatgaact     1320

tggctgaaac cacacaggct gatttatgta tcccctatgt tgctgacaca aactatgtta     1380

aaacagattc gtcagactta gggcaactaa aagtttatgt ttggacacct ttatccatac     1440

cttcaggttc tgctacacaa gttgatgtaa ccatactggg tagcttattg caattggatt     1500

ttcaaaaccc cagggtattt ggccaagatg ttggtattta tgacaatgca ccaacacgga     1560

agcaaaacct aaaaaagatt cttacaatga gcactaaata taagtggact agacaaaaaa     1620

ttgacattgc agagggacca ggttctatga acatggcaaa tgtattaagc accactgcag     1680

cacaatcaat tgctttggtt ggagaaagag cattctatga cccaagaaca gcaggaagta     1740

agagtaggtt tgatgactta gtaaaaatat ctcaactttt ctctgtgatg agtgactcca     1800

caactccttc agctaaccat ggtatagatg caaaaggtta tttcaagtgg tcatccacaa     1860

ctgcgccaca atctgtggta cataggaata ttgtttacct aaaacagttt cccaacttga     1920

atgtttttgt caacagctac tcatatttta gaggctcaat agtgctgagg ctgagtgtat     1980

atgccagcac tttcaataga ggtcgtctac ggatgggctt cttcccaaat gcaaccgaag     2040

acagtacttc agaaatagac aatgccatat acacaatttg tgatttgggc agtgataaca     2100

gttttgaaat cactattcca tactcatttt ccacctggat gcgtaaaaca gatggccacc     2160

cgattggatt gttccaaatt gaagtgctta acaggttaac ttacaatagc tccagcccta     2220

atgaagttta ttgtattgtg cagggtaaaa tggggcagga cgccaggttt ttctgcccaa     2280

ctggttctgt agtgactttc caaaattcat ggggttcaca aatggatttg actgatccat     2340

tatgtttaga agaatctgca gaggaatgca aacagaccat atcaccaaac gaattgggcc     2400

taacatcagc tcaggatgat ggaccattgg gtgataacaa gccaaattat ttcctaaatt     2460

ttaagtccat gaatgtggac atcttcactg tctcgcacac taaagtagac aacctatttg     2520

gaagagcctg gttttaccag gagcacactt tcaccaatga agggcagtgg agagttaatt     2580

tagagttccc aaaacaaggc catggttcgc tttccttgct attcgcttat ttcacaggtg     2640

aattaaatat ccatgttttg ttcctagctg agaagggatt ccttagagta gctcacacct     2700

acgacacatc agaaaacagg gttaatttct tgtcatccaa tggtgttatc acaatcccag     2760

ctggagaaca gatgacatta tctgcacctt actactcgaa taagcccctt agaacagtta     2820

gggataacaa tagtcttggg tatttaatgt gtaaaccatt cctcactgga acaacaacag     2880

ggaaaataga ggtctatctt agtttgagat gtccaaattt cttcttccct cttcccgcac     2940

ctaaagttac aactggccgc gctttgcggg gtgacttggc aaatttctca gatcagagcc     3000

tatatgatca acaatcacag agccaagtga tgaagctagc ttacttagat aggggtttct     3060

acaagcacta tggcattata gtaggagata gtgtgtatca gttggattca gatgacattt     3120

tcaaaacagc tttaacaggg aaagctaagt ttactaagac aaaattaact ccagactggg     3180

tcattgagga agaatgcgaa ttggattatt tcagggtaaa gtaccttgaa tcatctgtca     3240

actcagagca tatcttctca gtagaccaca attgtgaaac tattgctaag gatatttttg     3300

gcacccacac tcttagtcag caccaggctg ttggtttgat aggcacaatt ctcttaactg     3360

ctggtctaat gtcgactatt aaaacaccag tcaatgccac aaccatcaaa gaattcttca     3420

atcatgcagt ggaaggtgat gaacagggat tatctctact tgtacaaaaa tgcaccactt     3480

tcttctcttc agcagccaca gaaattttag acaatgattt ggttaaattt atagtgaaaa     3540

tccttgtcag aatcctctgt tacatggtgt tatattgcca caaaccaaat attctaacca     3600

ctgcttgttt atccacacta ctaataatgg atgtcacatc ttcatctgtg ttatcgcctt     3660

cttgtaaggc actcatgcag tgcctaatgg atggtgatgt caagaaactg gcagaggttg     3720

tggctgaatc catgtctaat acagatgatg aggaaatcaa agaacaaatt tgtgacacag     3780

taaaatatac caaaagtatt ctatcaaacc agggaccctt taaaggtttt aatgaagtgt     3840

caacagcatt caggcacatt gattggtgga tacacactct attgaaaata aaagacatgg     3900

ttctgagtgt attcaagccc agtatggaga gcaaggctat tcagtggtta gagagaaata     3960

aagagcatgt ttgtgctgtc ttggattatg cctctgatat cattgtggag tcaaaagacc     4020

agacaaaaat gaaatcacaa gaattttacc agaaatatac tgattgctta tctaaattta     4080

aaccaattat ggctatttgc tttagaagtt gccacaatag cattagcaat acagtctata     4140

gactattcca agagctagct agaataccat ctaggattag cactcagaat gatttgatta     4200

gagtggaacc aattggcgtc tggatccaag gtgaaccagg acaaggaaaa tctttcttaa     4260

cacacacact atccagacag ttgcaaaaat cttgcaaatt aaatggtgtg tacaccaacc     4320

caacagctag tgagtttatg gatgggtatg ataatcagga tattcacctc attgatgatt     4380

tgggacaaac taggaaggag aaagacattg aaatgttgtg taattgtatt tcctcagttc     4440

catttattgt cccaatggca catcttgaag agaagggcaa attttacacc agcaaactag     4500

tgatagcaac aactaacaaa tctgattttt caagtacagt cctgcaagat tctggtgcat     4560

taaagagaag attcccatac atcatgcata ttagagcagc taaagcatac agtaaggccg     4620

gaaaactcaa tgtcagtcaa gctatgtcga ccatggccac tggtgagtgc tgggaagtgt     4680

caaagaatgg tagggactgg gaaactctaa gactaaagga cttagtccat aagattactg     4740

aggattacca ggagagacag aagaattatg attgctggaa acagcagtta gagaaccaaa     4800

ctttagatga tttggatgat gcagtctctt acatcaagca caatttccca gatgcagttc     4860

catatataga tgagtatctt aacattgaaa tgtcaacact aattgagcaa atggaagcct     4920

tcattgagcc taggcctagt gttttcaaat gttttgcaac caaggttgct aaccagacaa     4980

agaaagcaac caaagaagtt gtggaatggt ttagtagcaa aatcaagtca atgctgagtt     5040

ttgtagaaaa aaataaagcc tggctaacag tagtttcagc tgttaccagt gcaattagta     5100

tattgctcct ggtaacaaaa attttcaaga aagaagactc aaaagatgaa agagcataca     5160

acccaacact ccctgttaca aaaccaaagg gcacattccc agtgacgcag agagaattca     5220

aaaatgaagc accttatgat ggacaattag aacatattat ctcccagatg gcttacataa     5280

ctggctccac aacagggcat cttacacact gcgctgggta ccaacatgat gagatcatat     5340

tgcatggaca ctcaatcaag taccttgaac aagaggagga attgaccctg cattacaaga     5400

ataaagtgtt cccagttgag tgcccttccg tgactcaagt cacattgggt ggcaaaccta     5460

tggatttggc catcctaaag tgtaaattac cattcagatt caagaaaaat tccaaatatt     5520

atactaacaa gattggaaca gagaatatgc taatttggat gactgaacaa ggcattatta     5580

ctaaggaagt tcagagggtc caccactctg gtggtatcaa aaccagagaa ggaactgaga     5640

gtacaaagac aattagctac acagtgaaat cttgtaaagg tatgtgtggg ggtttactca     5700

tctccaaagt ggaaggtaat tttaaaattc taggtatgca tatagctggg aatggggaaa     5760

tgggtgttgc cattcctttt aattttctta aaaatgacat gtctgatcaa ggcattgtca     5820

cagaagttac acccatacag cccatgtaca tcaatactaa gactcaaatc cataagagcc     5880

cagtctatgg tgcagtggaa gttaagatgg gtccagcagt cctgagtaaa tcagacccca     5940

gacttgaaga accggttgaa tgcttaatca agaaatcagc tgccaaatac agagtcaaca     6000

aatttcatgt caataatgag ttatggcaag gagtcaaggc ttgtgttaaa tccaaattca     6060

gagaaatctt tgggatcaat gggatagtgg atatgaaaac agctattctt ggcacatctc     6120

atgtaaattc catggacctt agcacgtcag ctggatatag ttttgttaag gcaggttaca     6180

aaaagaaaga tctaatttgt cttgaaccct tctctatttc tcctatgctt gagaaacttg     6240

tacaagaaaa atttcataac ttacttaagg gcaatcagat taccacaatt ttcaacactt     6300

gtttaaaaga tgaactgagg aaattggata aaatctcagc tggtaaaacc aggtgcattg     6360

aggcatgtga agtggattat tgcatagttt ataggatgat catgatggaa atttatgata     6420

aaatctatca gacaccgtgt tactattcag gccttgctgt tggaataaac ccatacaaag     6480

attggcactt catgatcaat gccttgaatg actacaatta tgaaatggat tactctcagt     6540

acgatggttc ccttagttca atgctactgt gggaagctgt ggaagtcttg gcatattgtc     6600

atgattcacc tgatcttgtt atacagttac atagaccagt gattgactcg gaccatgtgg     6660

tcttcaacga gagatggttg attcatggag gtatgccatc agggtcccca tgtactactg     6720

tgttaaattc attatgcaac cttatgatgt gcatctatac taccaactta atcagcccag     6780

gaattgactg tttaccaatt gtttatggtg atgatgtcat cttgtcgctt gacaaagaaa     6840

tagaccctga gaaactgcaa agtatcatgg cagactcatt tggtgcagaa gtgactggtt     6900

ctcgcaagga tgaacctcca tcattgaaac ccagactgga ggtagaattt ttaaagcgta     6960

aacctggtta cttcccagag tccacattta tagtagggaa actggacact gaaaatatga     7020

tacaacattt aatgtggatg aaaaatttta gcacatttaa gcagcaactc caatcctact     7080

taatggagtt atgcctccat ggaaaagaca cttacttgca ctacatcaaa attttggatc     7140

cctatttgaa agagtggaat attatagtgg atgattatga tgtggttata actaagttga     7200

tgcccatggt gtttgattag aattaatgtt ttggtttttt tttgttatgg actttatcat     7260

taaaacacta atttgattat tacactaatt tgaaatattg gacataccaa aaaaaaaaaa     7320


<210>  41
<211>  7348
<212>  DNA
<213>  Human parechovirus type 5

<400>  41
tggccgtygg gccttatacc ccgacttgct gagtttctct aggagagycc ctttcccagc       60

cttgaggtgg ctggtcaata aaaacctcaa ctgtaactaa catccaagct gattttatag      120

ataccccatg cctggtcccc actagtcgaa agcacctggc aataagatga gtggaaaagg      180

gcgcttaaag catggtgtta gtatacattt ctaacctgtg actatcacgg ggtggcagat      240

ggcgtgccat aactctatta gtgagatacc acgtttgtgg accttatgct cacacagcca      300

tcctctagta agcttgcaag gcgtctgatg acgtgtggga actaattgga aatgacagtt      360

tgctgctaag catcctattg ccagcggatc aacacctggt aacaggtgcc tctggggcca      420

aaagccaagg tttaacagac cctttaggat tggttcaaac ctgaactgtt gtggaagatt      480

ctcagtacct gctaatttgg tagttaggca agcactagtt gtaaggccca cgaaggatgc      540

ccagaaggta cccgtaggta acaagtgaca ctatggatct gatctggggc cagctacctc      600

tttcatggtg agttggttaa aaaacgtcta gtgggccaaa cccagggggg atccctggtt      660

tcctttattt tatcatagtc attatggaga caatcaagaa cattgcagat atggcaactg      720

gtttcacaaa tactattgac tcaacagtaa acgctgttac agaaggaatt tcaaagattg      780

gaaatgattc tggtggggaa atacttacta aggtggctga tgacgcttca agtctccttg      840

gacctaactg tgtagcatcc acttcacaac ctgagaacaa ggatgtcgtc caagctacca      900

caactgttaa tacaactaat ctgacgcaac atccttcagc tcctacaatg cctttctcac      960

ctgatttttc taatgttgat gttttccact ctatggctta tgatgtaacc actggagaca     1020

agaatcccag taagctaatt agacttaata ccacaacttg gcaacacaca tggccacggc     1080

agcatttgat aaatgatgtg caactacccc aagctttctg ggacaagaat agcaaaccag     1140

catatggaca atcaaggtac tttgccgctg taaggtgtgg tttccatttc caagtgcaaa     1200

ttaatgtgaa tcaaggtacc gctgggtgtg ctctagtagt atatgagcca aaaccaattg     1260

ttacacatgg tagccacctt gaatttggtt ctttcactaa tttaccacat gtccttatga     1320

atcttgctga gactacccaa gccgacttgt gtatccccta tgtatctgac acaaactatg     1380

tcaagaccga ttcgtcagac ttagggcgcc taagggttta tgtttggaca ccactaacaa     1440

ttccgtccag tgcaacaaat gatgtagatg tgacagtatt aggtagttta ctccaattgg     1500

acttccagaa cccaagaact tatgatactg atgtagacat ttatgacaat ggcccaaaat     1560

cgaaatatga taaggcaaga ttggccaaga aatttttaac catgtctacc aagtacaagt     1620

ggacgaggaa caaagtagac atagcagaag gacctggttc catgaatatg gctaacgtac     1680

taagtacaac tggtgcacaa tctatcgccc tagtgggaga aagagcattt tatgacccac     1740

gtactgctgg aagtaaatca aggtttggtg acatgattca catagcacaa ttattctctg     1800

taatgtcaga tacaaccacc ccatcaacat ctagtgggat agatgatttt ggatattttg     1860

attggtcagc aacttatgta ccacaacagg ttatacatag gaatgttgtc aaattaagcc     1920

aattttcaaa tttgaaacca tttgtcaatg cgtacaccta cttcagaggc tctttagtgt     1980

tgaggatgtc tgtatacgct agtacattca acagaggacg tctgcgtatg ggattttttc     2040

caaattttac aacaaataca acttcagaga tggataatgc aatctacaca atctgtgata     2100

ttggctcaga caatagcttt gaaatcacaa taccatacac attctccaca tggatgagga     2160

aaacagatgg gcggccactc gggctattcc aagttgaagt cctaaataga ctcacatata     2220

atagttcatg cccaaataag gtgcactgca ttgtacaagg cagattagga aatgatgcta     2280

ggttttactg tccaacagga tctttggtag aatttcagaa ttcatggggt tcacaaatgg     2340

acttgagtga tccactgtgt atggaagggg atgaggctga agattgtaaa caaactatct     2400

caccagatga attaggcctc acgtccgccc aggatgacgg cccattggga gtagaaaaac     2460

caaactattt tctaaatttc agagctatta atgttgacat tttcacagtt agccacacca     2520

aagttgacaa catatttggt agagcttggt tggccctcga acatacattt gctgatgatg     2580

gaacatggag agctgatcta aatttcccca cacaaggaca tgggaccttg acaagattat     2640

tcacttatta ctcaggtgaa ctgaatgtac atgttttata tcttagtgat aatgggttcc     2700

ttcgggttac acatgcttat gaccacaaag acaacaggtc caacttttta tcatcaaatg     2760

gagttatcac tgtgcctgcc ggggagcaaa tgacattatc ggttccattt tactcctcaa     2820

aacctctcag aactattaga gactcagggg cgctcggcaa attgatttgc aaaccacttt     2880

tgtctggtac ccactctggt aaaattgaag tatatctgag tcttaggtgc cctaatttgt     2940

ttttcccatc accagcccct aaagaaaaga gctccaggtc tatagctgga aacccctttg     3000

aagatgagag tccatacacc acaccatcat gcaaccaaat gatgaaattg gcttacttag     3060

ataggggatt ttacaaacac tatggtataa tagttggaga ctatgtttat caactagact     3120

cagatgacat ctttaagact gcgctcacag ggaaagccaa gtttacaaaa accaagctga     3180

acaatgattg ggtcatagaa gaggagtgtg aactagacta cttcagggtc aagtatttgg     3240

aatcctcagt taactcagaa catatattct caatggataa gaattgtgag acaattgcca     3300

aagatatatt tggttcacat gcactcagcc agcatcaggc cattgggtta gttgggacaa     3360

tactcttaac tgctgggtta atgtcaacca ttaagacacc agtcaatgcc actactatta     3420

aagaattttt caatcatgca attgatggtg atgaacaagg gttgtccctt cttgtacaaa     3480

aatgtaccac cttcttttcc tctgctgcca cggaaatctt agacaatgac ctggtaaagt     3540

ttatagttaa gattctagtt agaatactgt gctacatggt cctttattgc cacaagccaa     3600

acatcctcac tacagcttgt ctttccacgc tcctaataat ggacgtgaca tcttcatcag     3660

tattgtcacc ctcttgtaag gcactcatgc aatgcctaat ggatggtgat gttaagaaat     3720

tggcagaggt tgtggctgag tccatgtcca acacagatga tgaagaaatt aaagagcaaa     3780

tttgtgacac agtaaaatac accaagacta tcctatcaaa tcagggacct tttaagggct     3840

tcaatgaagt gtcaacagca tttaggcata ttgattggtg gatacatact ctattgaaaa     3900

ttaaagatat ggttctgagt gtattcaaac ccagtattga gagtaaagct attcagtggt     3960

tagagaggaa taaagagcat gtttgtgcca ttttggatta tgcctcagat attattgtgg     4020

aatcaaaaga tcagacaaag atgaaaacac aagaatttta ccagaaatat actgattgtt     4080

tgtctaaatt taaaccaatt atggctattt gtttcagaag ctgccacaac agcattagca     4140

atacagtcta taggttattc caagaattag ccagaattcc atctagaatt agcactcaga     4200

atgatttgat tagagtggaa ccaattggtg tttggatcca aggtgaacca ggacaaggaa     4260

aatctttcct aacacacaca ctatctagac aattgcaaaa gtcctgtaaa ttaaacggtg     4320

tatataccaa cccaacagcc agtgagttta tggatgggta tgataaccag gacattcacc     4380

tcattgatga tttggggcaa actaggagag agaaagacat tgaaatgttg tgcaattgta     4440

tttcttcagt tccgttcata gttccaatgg cacatcttga ggagaaaggc aaattttata     4500

ctagtaaatt ggtaatagca acaactaaca aatctgattt ttctagcaca gtgcttcaag     4560

actctggtgc cttgaagagg agattcccat atataatgca catcagggct gctaaggctt     4620

acagcaaagc tggcaaacta aatgtcagtc aagccatgtc tactatggct actggtgaat     4680

gctgggaagt atccaaaaat ggtagagatt gggagacatt aaagctaaaa gatttagtga     4740

aaaaaatcac agaagattat caggagagac agaagaacta tgattgttgg aaacaacagc     4800

tagaaaacca gactctggat gacctggatg atgctgtttc atacattaag cacaattttc     4860

ctgatgcaat tccatatatt gatgagtacc ttaacattga aatgtccaca ttaatagaac     4920

aaatggaagc tttcattgaa ccacggccta gtgtattcaa atgctttgcc actaaggtag     4980

ctagtcaaac caggaaagca gccaaagagg tcgtagactg gtttagtaat aaaattaagt     5040

caatgttgag ttttgttgag agaaacaagg cctggttaac tgtggtttct gctgttacca     5100

gtgctataag catcttgctt ttggtcacca aaatctttaa aaaagaagaa tccaaagatg     5160

aaagggctta taacccaaca ctaccggcca caaaaccaaa aggtaatttc cctgtttccc     5220

aaagagaatt caagaatgaa gcgccatatg atggacaatt agaacatatt atctctcaga     5280

tggcatacat aactggctct tccacaggac atcttacaca ttgtgctggt taccaacatg     5340

atgaaattat attgcatggt cactcaataa aatacttaga gcaagaggag gaattaactt     5400

tgcactacaa aaacaaggtg tttccaatag agcagccttc agtcacccaa gtgacacttg     5460

gtggtaaacc aatggatctg gccattctaa aatgcaaact acctttcaga tttaaaaaaa     5520

actccaaata ttacactaat aagattggca cagaaagtat gttaatttgg atgacagaac     5580

aagggataat cactaaagag gttcagagag ttcaccattc acgtggaatt aaaactagag     5640

aaggcactga aagtactaaa actattagtt acactgtaaa gtcctgtaaa gggatgtgtg     5700

gtggcttact catctctaaa gttgaaggga atttcaaaat ccttggcatg cacatagctg     5760

gtaatggaga aatgggtgta gcaattccat tcaatttcct gaaaaatgac atgtcagatc     5820

aaggcattgt aatggatata acacccatcc agcccatgta tatcaataca aaatcacaga     5880

tccacaaaag tcctgtttat ggagcagttg aagtaaagat gggaccagct gtacttagta     5940

aatcagacac taggctggaa gagccagtag aatgtttaat taagaagtct gcttccaagt     6000

acagggtaaa taagtttcaa gttaacagtg aattatggca gggagttaaa gcttgtgtta     6060

aatccaaatt tagagaaata tttggtataa gtggcatagt tgacatgaaa acagcaatac     6120

tcggaacatc acatgttaac tcaatggatc ttagcacttc agctgggtat tcatttgtta     6180

aaagtgggta caagaagaaa gacttgatct gtttggaacc attttcaatt agtcctatgt     6240

tggaaaaatt ggtgcaggac aaattccaca atttattgaa aggtaaccag atcacaacaa     6300

ttttcaacac ctgccttaaa gatgaactca ggaaactaga caaaattgct gctggtaaga     6360

ctagatgtat agaagcctgt gaggtggatt actgcattgt ttataggatg attatgatgg     6420

aaatttatga caaaatctac caaactccat gttactattc aggacttgca gttgggatca     6480

atccctataa agattggcac ttcatgatca atgccctcaa tgaatacaac tatgaaatgg     6540

attactctca gtatgatgga tcacttagtt caatgttgtt gtgggaagca gtggaagttc     6600

tagcatattg tcatgattcg ccagatctcg ttatgcaact ccacaaacca gtgattgact     6660

ctgatcacgt ggtgtttaat gagaggtggt tgattcatgg tggtatgcca tctggatctc     6720

cttgcaccac cgtactaaat tcactctgta atttgatgat gtgcatctac actacaaatt     6780

tgattagtcc agggattgat tgtctaccaa tagtctatgg agatgatgtg attctatcat     6840

tagataaaga aattgaacca gagaaactgc aaagtatcat ggcagattca tttggagctg     6900

aagtaaccgg ttcccggaag gacgaacctc caacactaaa accacgaatg gaggtagaat     6960

ttctgaagag aaagcctggt tacttcccag agtctacttt tatagtagga aaattagaca     7020

ctgaaaacat gatacaacat ttaatgtgga tgaaaaactt cagcacattc aagcagcaac     7080

tccaatccta cttaatggag ttatgcctcc atggaaaaga catttaccaa cactacatca     7140

aagttttgga tccttatctg aaagaatgga atatagcagt ggatgattat gatgtggtaa     7200

ttgctaaatt gatgcccatg gtgtttgatt aaaatattgt tttggttttc ttttgctatg     7260

gactttataa ttaggacact attataatta gaacactaat tcggaatatt ggacatgaca     7320

aaaaaaaaaa aaaaaaaaaa aaaaaaaa                                        7348


<210>  42
<211>  2256
<212>  PRT
<213>  Ljungan virus 145SL


<220>
<221>  misc_feature
<223>  Polyprotein

<400>  42

Met Ala Ala Thr Lys Met Asn Pro Val Glu Asn Leu Leu Ser Thr Val 
1               5                   10                  15      


Ser Ser Thr Val Gly Ser Leu Leu Gln Asn Pro Thr Met Glu Glu Lys 
            20                  25                  30          


Glu Met Asp Ser Asp Arg Val Ala Ala Ser Thr Thr Thr Asn Ala Gly 
        35                  40                  45              


Asn Val Val Gln Ala Ser Val Ala Pro Thr Met Pro Ile Lys Pro Asp 
    50                  55                  60                  


Phe Lys Asn Thr Asp Asn Phe Leu Ser Met Ser Tyr Ser Pro Asn Thr 
65                  70                  75                  80  


Ala Pro Thr Asn Pro Thr Lys Met Val His Leu Ala Asn Gly Thr Trp 
                85                  90                  95      


Thr Thr Ser Gln His Arg Gln Ser Leu Val Ala Ser Ile Gln Leu Pro 
            100                 105                 110         


Gln Ala Phe Trp Pro Asn Glu Arg Tyr Pro Ala Trp Gly Gln Ser Arg 
        115                 120                 125             


Tyr Phe Ala Ala Val Arg Cys Gly Phe His Ile Gln Val Gln Leu Asn 
    130                 135                 140                 


Val Asn Ile Gly Ser Ala Gly Cys Leu Ile Ala Ala Tyr Met Pro Lys 
145                 150                 155                 160 


Ser Ala His Asp His Met Asp Thr Tyr Thr Phe Ser Ser Tyr Thr Asn 
                165                 170                 175     


Leu Pro His Val Leu Met Asn Ala Ala Thr Thr Ser Gln Ala Asp Leu 
            180                 185                 190         


Tyr Ile Pro Tyr Val His Asn His Asn Tyr Ala Lys Thr Asp Ser Asp 
        195                 200                 205             


Asp Leu Gly Gly Ile Tyr Ile Trp Cys Trp Ser Ala Leu Thr Val Pro 
    210                 215                 220                 


Ser Gly Ser Pro Thr Thr Val Asp Val Thr Ile Phe Gly Ser Leu Leu 
225                 230                 235                 240 


Asp Leu Asp Phe Gln Cys Pro Arg Pro Pro Gly Ala Asn Thr Val Ile 
                245                 250                 255     


Phe Thr Gln Gly Lys Arg Thr Ala Arg Lys Thr Lys Ala Thr Lys Phe 
            260                 265                 270         


Lys Trp Thr Arg Asn Lys Ile Asp Ile Ala Glu Gly Pro Gly Ala Leu 
        275                 280                 285             


Asn Ile Ala Asn Val Leu Ser Thr Thr Gly Gly Gln Thr Val Ala Leu 
    290                 295                 300                 


Val Gly Glu Arg Ala Phe Tyr Asp Pro Arg Thr Ala Gly Ala Ala Val 
305                 310                 315                 320 


Arg Cys Lys Asp Leu Met Glu Ile Ala Arg Met Pro Ser Val Tyr Lys 
                325                 330                 335     


Gly Glu Arg Thr Glu Pro Gly Gly Thr Asn Gly Tyr Phe Gln Trp Ser 
            340                 345                 350         


His Thr His Ser Pro Ile Asn Trp Val Phe Asp Gly Gly Ile His Leu 
        355                 360                 365             


Glu Asp Met Pro Asn Leu Asn Leu Phe Ser Ser Cys Tyr Asn Tyr Trp 
    370                 375                 380                 


Arg Gly Ser Ile Val Leu Lys Leu Thr Val Tyr Ala Ser Thr Phe Asn 
385                 390                 395                 400 


Lys Gly Arg Leu Arg Met Ala Phe Phe Pro Asn His Asp Ala Arg Tyr 
                405                 410                 415     


Thr Glu Glu Glu Ala Gln Asn Ala Ile Phe Met Val Cys Asp Ile Gly 
            420                 425                 430         


Leu Asn Asn Thr Phe Glu Met Thr Ile Pro Tyr Thr Trp Gly Asn Trp 
        435                 440                 445             


Met Arg Pro Thr Arg Gly Ser Val Ile Gly Trp Leu Arg Ile Asp Val 
    450                 455                 460                 


Leu Asn Arg Leu Thr Tyr Asn Ser Ser Ser Pro Asn Ala Val Asn Cys 
465                 470                 475                 480 


Ile Leu Gln Val Lys Met Gly Asn Asp Ala Lys Phe Met Val Pro Thr 
                485                 490                 495     


Thr Ser Asn Ile Val Trp Glu Gly Leu His Ser Trp Gly Ser Glu Met 
            500                 505                 510         


Asp Leu Leu Asp Ser Leu Asp Asn Pro Glu Glu Ile Gln Asp Met Glu 
        515                 520                 525             


Glu Pro Glu Ser Glu Asn Val Glu Ala Ala Gln Gly Glu Glu Ala Ala 
    530                 535                 540                 


Thr Ala Val Gly Leu Arg Ala Thr Glu Asn Asp Gly Ser Leu Ser Glu 
545                 550                 555                 560 


Gln Gln Asn Met Ala Gln Pro Met Phe Leu Asn Phe Lys Gln His Arg 
                565                 570                 575     


Val Asp Ile Tyr Ser Ala Ser His Thr Lys Val Asp His Ile Phe Gly 
            580                 585                 590         


Arg Ala Trp Ala Val Gly Ile Phe Asn Val Thr Asn Ala Asn Ile Ser 
        595                 600                 605             


Lys Phe Asp Leu Asn Phe Pro Thr Thr Thr His Gly Ala Leu Cys Arg 
    610                 615                 620                 


Phe Phe Cys Phe Trp Thr Gly Glu Leu Asn Leu His Ile Leu Asn Ile 
625                 630                 635                 640 


Ser Ser Ser Asn Ala Pro Val Lys Val Ala His Thr Trp Phe Gly Thr 
                645                 650                 655     


Asp Ser Gly Ile Ala Arg Thr Ala Thr Leu Glu Ser Asn Gly Val Ile 
            660                 665                 670         


Ile Ile Pro Pro Asn Glu Gln Met Thr Leu Cys Ile Pro Tyr Tyr Ser 
        675                 680                 685             


Glu Ala Pro Leu Arg Cys Val Lys Gly Pro His Ser Ala Gly Ala Gly 
    690                 695                 700                 


Leu Gly Ser Ile Phe Thr Gln Cys Ile Gly Asn Ser Val Asn Asn Arg 
705                 710                 715                 720 


Ile Gln Ile Phe Val Ser Phe Arg Cys Pro Asn Phe Phe Phe Pro Leu 
                725                 730                 735     


Pro Ala Pro His Glu Ala Ser Ser Arg Ser Ile Leu Gln Arg Ile Ser 
            740                 745                 750         


Thr Ala Ser Ala Asp Glu Leu Glu Ala Val Leu Asp Ala Lys Thr Pro 
        755                 760                 765             


Asp Ala Pro Val Arg Leu Cys Tyr Gln Pro Glu Asp Pro Leu Arg Gln 
    770                 775                 780                 


Leu Arg Glu Ala Ala Lys Ala Tyr Phe Asn Ile Met His Asn Asp Glu 
785                 790                 795                 800 


Met Asp Tyr Ser Gly Gly Lys Phe Leu Asn Gln Cys Gly Asp Val Glu 
                805                 810                 815     


Ser Asn Pro Gly Pro Asp Ile Glu Leu Val Tyr Lys Asn Arg Gly Phe 
            820                 825                 830         


Tyr Lys His Tyr Gly Val Arg Phe Gly Gly Phe Ile Tyr His Leu Asn 
        835                 840                 845             


Ser Gln Asp Ile Leu Ser Thr Ala Ile Thr Gly Lys Ser Asp Phe Ile 
    850                 855                 860                 


Lys Glu Glu Asp Asp Gly Lys Trp Thr His Ala Met Thr Ala Pro Leu 
865                 870                 875                 880 


Asp Tyr Phe Thr Glu Lys Tyr Val Lys Ser Met Val Gly Ser Lys His 
                885                 890                 895     


Ile Phe Ser Ala Thr Ser Asn Cys Glu Thr Ile Ala Arg Asp Leu Phe 
            900                 905                 910         


Pro Gly Lys Lys Glu Ile Ser Gln Ser Lys Ala Leu Gly Ile Ile Gly 
        915                 920                 925             


Val Ile Leu Leu Ser Ala Ser Leu Leu Ser Leu Leu Ala Val Pro Trp 
    930                 935                 940                 


Asp Tyr Ser Ser Leu Gln Thr Val Tyr Asn Gln Ser Ile Glu Gly Asp 
945                 950                 955                 960 


Ala Ser Gly Leu Thr Leu Leu Ser Gln Arg Cys Met Thr Phe Phe Ser 
                965                 970                 975     


Asn Thr Met Cys Glu Thr Phe Asn Asn Asp Leu Val Lys Phe Ile Ile 
            980                 985                 990         


Lys Ile Leu Val Arg Leu Leu Cys  Tyr Ile Val Leu Tyr  Cys His Ala 
        995                 1000                 1005             


Pro Asn  Met Leu Thr Thr Met  Cys Leu Gly Thr Leu  Leu Val Leu 
    1010                 1015                 1020             


Asp Ile  Thr Thr Cys Glu Ile  Leu Ser Ala Asn Thr  Lys Ala Leu 
    1025                 1030                 1035             


Phe Gln  Ala Leu Leu Asp Gly  Asp Val Lys Asn Leu  Val Trp Lys 
    1040                 1045                 1050             


Ile Ala  Glu Asn Met Gln Phe  Ala Gln Ser Thr Asp  Glu Gln Ala 
    1055                 1060                 1065             


Glu Glu  Met Ala Ala Thr Phe  Ser Phe Ala Lys Asp  Met Val Asp 
    1070                 1075                 1080             


Ile His  Pro Ile Gly Ala Glu  Pro Phe Gln Asn Gln  Gly Phe Arg 
    1085                 1090                 1095             


Glu Phe  Asn Asp Val Ser Met  Ser Phe Arg His Ile  Glu Trp Trp 
    1100                 1105                 1110             


Leu Thr  Met Phe Lys Lys Val  Tyr Asn Val Leu Lys  Gly Ile Phe 
    1115                 1120                 1125             


Ser Pro  Ser Ile Glu Gln Lys  Ala Val Ala Trp Leu  Asp Arg Asn 
    1130                 1135                 1140             


Gln Glu  Tyr Val Ala Ser Ile  Leu Asp His Cys Ser  Asp Met Ile 
    1145                 1150                 1155             


Ile Arg  Met Lys Asp Pro Lys  Gln Gln Arg Asn Pro  Lys Thr Ile 
    1160                 1165                 1170             


Glu Glu  Tyr Phe Asp Val Leu  Lys Lys Met Lys Pro  Leu Val Ser 
    1175                 1180                 1185             


Leu Cys  Ile Lys Val Ala Pro  Ser Thr Lys Phe Ser  Ser Gln Val 
    1190                 1195                 1200             


Phe Arg  Leu Tyr Ser Glu Leu  Met Lys Val Asn Val  Arg Val Pro 
    1205                 1210                 1215             


Val Asn  Thr Asp Leu Thr Arg  Ile Glu Pro Ile Gly  Val Trp Ile 
    1220                 1225                 1230             


Ser Ser  Glu Pro Gly Gln Gly  Lys Ser Phe Phe Thr  His Met Leu 
    1235                 1240                 1245             


Ser Thr  Ser Leu Leu Lys Ser  Cys Asn Leu Asp Gly  Val Tyr Thr 
    1250                 1255                 1260             


Asn Ala  Thr Gly Ser Glu Phe  Met Asp Gly Tyr Val  Gly Gln Asp 
    1265                 1270                 1275             


Ile His  Ile Ile Asp Asp Ala  Gly Gln Asn Arg Glu  Glu Lys Asp 
    1280                 1285                 1290             


Leu Ala  Leu Leu Cys Gln Cys  Ile Ser Ser Val Pro  Phe Thr Val 
    1295                 1300                 1305             


Pro Met  Ala Asp Leu Thr Glu  Lys Gly Thr Phe Tyr  Thr Ser Lys 
    1310                 1315                 1320             


Ile Val  Ile Ala Thr Thr Asn  Lys Ser Asp Phe Asn  Cys Met Val 
    1325                 1330                 1335             


Leu Thr  Asp Pro Ala Ala Leu  Glu Arg Arg Phe Pro  Phe Asn Leu 
    1340                 1345                 1350             


Arg Ile  Arg Ala Val Lys Ser  Phe Met Asn Lys Asp  Arg Lys Leu 
    1355                 1360                 1365             


Asp Val  Pro Arg Ser Met Gly  Ala Met Ala Asp Gly  Ser Cys Trp 
    1370                 1375                 1380             


Glu Cys  Ser Met Asp Tyr Gly  Arg Thr Trp Asn Thr  Val Val Met 
    1385                 1390                 1395             


Arg Asp  Leu Val Lys Gln Ile  Thr Glu Met Tyr Lys  Gln Arg Asp 
    1400                 1405                 1410             


Asp Ala  Leu Thr Val Trp Lys  Tyr Lys Leu Asn Gln  Ile Arg Asn 
    1415                 1420                 1425             


Glu Met  Ser Pro Gly Asp Ser  Ile Gly Arg Ile Leu  Asp Pro Met 
    1430                 1435                 1440             


Glu Glu  Thr Leu Cys Ser Leu  Glu Arg Arg Phe Gly  Gln Leu Ala 
    1445                 1450                 1455             


Asp Ser  Leu Arg Glu Asn Tyr  His Arg Thr Ala Asp  Glu Leu Ile 
    1460                 1465                 1470             


Glu Val  Ile Glu Asp Met Met  Ala Pro Gly Asn Ser  Pro Phe Ala 
    1475                 1480                 1485             


Cys Phe  Glu Ser Val Ala Pro  Ser Leu Lys Pro Arg  Thr Ala Cys 
    1490                 1495                 1500             


Gln Lys  Val Lys Asp Trp Val  Lys Gln His Met Ile  Arg Trp Gly 
    1505                 1510                 1515             


Asn Phe  Val Met Arg Asn Lys  Gly Trp Phe Thr Leu  Phe Ser Val 
    1520                 1525                 1530             


Leu Ser  Ser Phe Leu Ser Ile  Leu Thr Leu Val Tyr  Leu His Tyr 
    1535                 1540                 1545             


Lys Lys  Glu Lys Lys Glu Glu  Glu Arg Gln Glu Arg  Ala Tyr Asn 
    1550                 1555                 1560             


Pro Gln  Thr Ala Thr Pro Lys  Lys Gly Gly Lys Pro  Lys Leu Ser 
    1565                 1570                 1575             


Leu Val  Lys Thr Thr Asn Phe  Ile Asn Glu Ala Pro  Tyr Met Gln 
    1580                 1585                 1590             


Asp Leu  Glu His Cys Phe Ala  Gln Thr Ala Tyr Ile  Ser Ser Pro 
    1595                 1600                 1605             


Glu Thr  Gln Asp Ile Ile His  Cys Ala Ala Leu Cys  Glu Asp Thr 
    1610                 1615                 1620             


Ile Leu  Val Tyr Gly His Ser  Gln Phe Tyr Phe Asn  Arg Tyr Glu 
    1625                 1630                 1635             


Asp Leu  Arg Leu His Phe Lys  Gly Ala Ile Phe Pro  Ile Glu Gly 
    1640                 1645                 1650             


Gly Lys  Ile Ser Gln Val Thr  Val Asn Gly Gln Pro  Met Asp Leu 
    1655                 1660                 1665             


Ile Leu  Val Lys Ile Asp Lys  Leu Pro Ile Thr Phe  Lys Asn Tyr 
    1670                 1675                 1680             


Thr Lys  Tyr Tyr Thr Thr Glu  Ile Gly Lys Glu Thr  Leu Leu Ile 
    1685                 1690                 1695             


Trp Asn  Ser Glu Lys Gly Arg  Leu Ala Met Pro Val  Gln Cys Val 
    1700                 1705                 1710             


Ala Pro  Ala Gly Pro Val Glu  Thr Met Glu Gly Thr  Ile Thr His 
    1715                 1720                 1725             


Lys Thr  Tyr Ser Tyr Lys Val  Ala Ser Lys Lys Gly  Met Cys Gly 
    1730                 1735                 1740             


Gly Leu  Leu Val Thr Arg Val  Asn Gly Thr Phe Lys  Val Leu Gly 
    1745                 1750                 1755             


Met His  Ile Ala Gly Asn Gly  Gln Val Ala Arg Ala  Ala Ala Val 
    1760                 1765                 1770             


His Phe  Ile Ser Asn Gly Ala  Ser Gly Phe Met Asp  Gln Gly Val 
    1775                 1780                 1785             


Val Val  Ala Lys Glu Lys Met  Gln Lys Pro Ile Tyr  Leu Pro Ser 
    1790                 1795                 1800             


Lys Thr  Ala Leu Asn Pro Ser  Pro Leu Asn Gly Val  Val Pro Val 
    1805                 1810                 1815             


Lys Met  Glu Pro Ala Val Leu  Ser Pro His Asp Val  Arg Leu Glu 
    1820                 1825                 1830             


Val Ile  Met Pro Ser Val Val  Lys Asn Ala Ala Ala  Lys Tyr Arg 
    1835                 1840                 1845             


Val Asn  Ile Phe Asn Pro Asp  Phe Glu Ile Trp Glu  Arg Val Val 
    1850                 1855                 1860             


Asp Glu  Leu Lys Ala Arg Phe  Arg Ser Lys Leu Gly  Ile His Lys 
    1865                 1870                 1875             


His Val  Ser Leu Gln Lys Ala  Val Gln Gly Phe Ser  Ser Leu Ser 
    1880                 1885                 1890             


Ser Leu  Asp Leu Ser Thr Ser  Pro Gly Gln Lys Tyr  Val Glu Lys 
    1895                 1900                 1905             


Gly Met  Lys Lys Arg Asp Leu  Leu Ser Thr Glu Pro  Phe Trp Met 
    1910                 1915                 1920             


His Pro  Gln Leu Glu Ser Asp  Val Lys Asp Ile Leu  Gly Ala Val 
    1925                 1930                 1935             


Tyr Ser  Gly Lys Lys Pro His  Thr Phe Phe Ala Ala  His Leu Lys 
    1940                 1945                 1950             


Asp Glu  Leu Arg Lys Lys Glu  Lys Ile Ala Gln Gly  Lys Thr Arg 
    1955                 1960                 1965             


Cys Ile  Glu Ala Cys Ser Ile  Asp Tyr Val Ile Ala  Tyr Arg Val 
    1970                 1975                 1980             


Val Met  Ser Ser Leu Tyr Glu  Ala Ile Tyr Gln Thr  Pro Ala Gln 
    1985                 1990                 1995             


Glu Leu  Gly Leu Ala Val Gly  Met Asn Pro Trp Thr  Asp Trp Asp 
    2000                 2005                 2010             


Pro Met  Ile Asn Val Leu Gln  Pro Tyr Asn Tyr Gly  Leu Asp Tyr 
    2015                 2020                 2025             


Ser Ser  Tyr Asp Gly Ser Leu  Ser Glu Gln Leu Met  Arg Tyr Gly 
    2030                 2035                 2040             


Val Glu  Ile Leu Ala Tyr Cys  His Glu Gln Pro Glu  Ala Val Met 
    2045                 2050                 2055             


Ile Leu  His Glu Pro Val Ile  Asn Ser Gln His Leu  Val Met Asp 
    2060                 2065                 2070             


Glu Ile  Trp His Val Asn Gly  Gly Met Pro Ser Gly  Ala Pro Cys 
    2075                 2080                 2085             


Thr Thr  Val Leu Asn Ser Ile  Cys Asn Leu Leu Val  Cys Thr Tyr 
    2090                 2095                 2100             


Leu Ala  Tyr Glu Gln Ser Leu  Asp Ile Glu Val Leu  Pro Ile Val 
    2105                 2110                 2115             


Tyr Gly  Asp Asp Val Ile Phe  Ser Val Ser Ser Pro  Leu Asp Ala 
    2120                 2125                 2130             


Glu Tyr  Leu Val Gln Ser Ala  Ala Gln Asn Phe Gly  Met Glu Val 
    2135                 2140                 2145             


Thr Ser  Ser Asp Lys Ser Gly  Pro Pro Lys Leu Leu  Lys Met Asp 
    2150                 2155                 2160             


Glu Ile  Glu Phe Leu Lys Arg  Thr Thr Lys Phe Phe  Pro Gly Ser 
    2165                 2170                 2175             


Thr Tyr  Lys Val Gly Ala Leu  Ser Leu Asp Thr Met  Glu Gln His 
    2180                 2185                 2190             


Ile Met  Trp Met Lys Asn Leu  Glu Thr Phe Pro Glu  Gln Leu Val 
    2195                 2200                 2205             


Ser Phe  Glu Asn Glu Leu Val  Leu His Gly Lys Glu  Ile Tyr Asp 
    2210                 2215                 2220             


Asp Tyr  Lys Asn Arg Phe Asn  Pro Ile Leu Asn Gln  Trp Arg Val 
    2225                 2230                 2235             


Cys Met  Gln Asp Tyr Glu Val  Ala Leu His Arg Met  Leu Arg Tyr 
    2240                 2245                 2250             


Val Phe  Asp 
    2255     


<210>  43
<211>  52
<212>  PRT
<213>  Ljungan virus 145SL


<220>
<221>  misc_feature
<223>  Polyprotein from position 976 to 1027

<400>  43

Ser Asn Thr Met Cys Glu Thr Phe Asn Asn Asp Leu Val Lys Phe Ile 
1               5                   10                  15      


Ile Lys Ile Leu Val Arg Leu Leu Cys Tyr Ile Val Leu Tyr Cys His 
            20                  25                  30          


Ala Pro Asn Met Leu Thr Thr Met Cys Leu Gly Thr Leu Leu Val Leu 
        35                  40                  45              


Asp Ile Thr Thr 
    50          


<210>  44
<211>  83
<212>  PRT
<213>  Ljungan virus 145SL


<220>
<221>  misc_feature
<223>  Polyprotein from position 1661 to 1743

<400>  44

Val Asn Gly Gln Pro Met Asp Leu Ile Leu Val Lys Ile Asp Lys Leu 
1               5                   10                  15      


Pro Ile Thr Phe Lys Asn Tyr Thr Lys Tyr Tyr Thr Thr Glu Ile Gly 
            20                  25                  30          


Lys Glu Thr Leu Leu Ile Trp Asn Ser Glu Lys Gly Arg Leu Ala Met 
        35                  40                  45              


Pro Val Gln Cys Val Ala Pro Ala Gly Pro Val Glu Thr Met Glu Gly 
    50                  55                  60                  


Thr Ile Thr His Lys Thr Tyr Ser Tyr Lys Val Ala Ser Lys Lys Gly 
65                  70                  75                  80  


Met Cys Gly 
            


<210>  45
<211>  221
<212>  PRT
<213>  Ljungan virus 145SL


<220>
<221>  misc_feature
<223>  Polyprotein from position 12 to 232

<400>  45

Leu Leu Ser Thr Val Ser Ser Thr Val Gly Ser Leu Leu Gln Asn Pro 
1               5                   10                  15      


Thr Met Glu Glu Lys Glu Met Asp Ser Asp Arg Val Ala Ala Ser Thr 
            20                  25                  30          


Thr Thr Asn Ala Gly Asn Val Val Gln Ala Ser Val Ala Pro Thr Met 
        35                  40                  45              


Pro Ile Lys Pro Asp Phe Lys Asn Thr Asp Asn Phe Leu Ser Met Ser 
    50                  55                  60                  


Tyr Ser Pro Asn Thr Ala Pro Thr Asn Pro Thr Lys Met Val His Leu 
65                  70                  75                  80  


Ala Asn Gly Thr Trp Thr Thr Ser Gln His Arg Gln Ser Leu Val Ala 
                85                  90                  95      


Ser Ile Gln Leu Pro Gln Ala Phe Trp Pro Asn Glu Arg Tyr Pro Ala 
            100                 105                 110         


Trp Gly Gln Ser Arg Tyr Phe Ala Ala Val Arg Cys Gly Phe His Ile 
        115                 120                 125             


Gln Val Gln Leu Asn Val Asn Ile Gly Ser Ala Gly Cys Leu Ile Ala 
    130                 135                 140                 


Ala Tyr Met Pro Lys Ser Ala His Asp His Met Asp Thr Tyr Thr Phe 
145                 150                 155                 160 


Ser Ser Tyr Thr Asn Leu Pro His Val Leu Met Asn Ala Ala Thr Thr 
                165                 170                 175     


Ser Gln Ala Asp Leu Tyr Ile Pro Tyr Val His Asn His Asn Tyr Ala 
            180                 185                 190         


Lys Thr Asp Ser Asp Asp Leu Gly Gly Ile Tyr Ile Trp Cys Trp Ser 
        195                 200                 205             


Ala Leu Thr Val Pro Ser Gly Ser Pro Thr Thr Val Asp 
    210                 215                 220     


<210>  46
<211>  88
<212>  PRT
<213>  Ljungan virus 145SL


<220>
<221>  misc_feature
<223>  Polyprotein from position 230 to 317

<400>  46

Thr Val Asp Val Thr Ile Phe Gly Ser Leu Leu Asp Leu Asp Phe Gln 
1               5                   10                  15      


Cys Pro Arg Pro Pro Gly Ala Asn Thr Val Ile Phe Thr Gln Gly Lys 
            20                  25                  30          


Arg Thr Ala Arg Lys Thr Lys Ala Thr Lys Phe Lys Trp Thr Arg Asn 
        35                  40                  45              


Lys Ile Asp Ile Ala Glu Gly Pro Gly Ala Leu Asn Ile Ala Asn Val 
    50                  55                  60                  


Leu Ser Thr Thr Gly Gly Gln Thr Val Ala Leu Val Gly Glu Arg Ala 
65                  70                  75                  80  


Phe Tyr Asp Pro Arg Thr Ala Gly 
                85              


<210>  47
<211>  73
<212>  PRT
<213>  Ljungan virus 145SL


<220>
<221>  misc_feature
<223>  Polyprotein from position 1079 to 1151

<400>  47

Lys Asp Met Val Asp Ile His Pro Ile Gly Ala Glu Pro Phe Gln Asn 
1               5                   10                  15      


Gln Gly Phe Arg Glu Phe Asn Asp Val Ser Met Ser Phe Arg His Ile 
            20                  25                  30          


Glu Trp Trp Leu Thr Met Phe Lys Lys Val Tyr Asn Val Leu Lys Gly 
        35                  40                  45              


Ile Phe Ser Pro Ser Ile Glu Gln Lys Ala Val Ala Trp Leu Asp Arg 
    50                  55                  60                  


Asn Gln Glu Tyr Val Ala Ser Ile Leu 
65                  70              


<210>  48
<211>  339
<212>  PRT
<213>  Ljungan virus 145SL


<220>
<221>  misc_feature
<223>  Polyprotein from position 1324 ot 1662

<400>  48

Ile Val Ile Ala Thr Thr Asn Lys Ser Asp Phe Asn Cys Met Val Leu 
1               5                   10                  15      


Thr Asp Pro Ala Ala Leu Glu Arg Arg Phe Pro Phe Asn Leu Arg Ile 
            20                  25                  30          


Arg Ala Val Lys Ser Phe Met Asn Lys Asp Arg Lys Leu Asp Val Pro 
        35                  40                  45              


Arg Ser Met Gly Ala Met Ala Asp Gly Ser Cys Trp Glu Cys Ser Met 
    50                  55                  60                  


Asp Tyr Gly Arg Thr Trp Asn Thr Val Val Met Arg Asp Leu Val Lys 
65                  70                  75                  80  


Gln Ile Thr Glu Met Tyr Lys Gln Arg Asp Asp Ala Leu Thr Val Trp 
                85                  90                  95      


Lys Tyr Lys Leu Asn Gln Ile Arg Asn Glu Met Ser Pro Gly Asp Ser 
            100                 105                 110         


Ile Gly Arg Ile Leu Asp Pro Met Glu Glu Thr Leu Cys Ser Leu Glu 
        115                 120                 125             


Arg Arg Phe Gly Gln Leu Ala Asp Ser Leu Arg Glu Asn Tyr His Arg 
    130                 135                 140                 


Thr Ala Asp Glu Leu Ile Glu Val Ile Glu Asp Met Met Ala Pro Gly 
145                 150                 155                 160 


Asn Ser Pro Phe Ala Cys Phe Glu Ser Val Ala Pro Ser Leu Lys Pro 
                165                 170                 175     


Arg Thr Ala Cys Gln Lys Val Lys Asp Trp Val Lys Gln His Met Ile 
            180                 185                 190         


Arg Trp Gly Asn Phe Val Met Arg Asn Lys Gly Trp Phe Thr Leu Phe 
        195                 200                 205             


Ser Val Leu Ser Ser Phe Leu Ser Ile Leu Thr Leu Val Tyr Leu His 
    210                 215                 220                 


Tyr Lys Lys Glu Lys Lys Glu Glu Glu Arg Gln Glu Arg Ala Tyr Asn 
225                 230                 235                 240 


Pro Gln Thr Ala Thr Pro Lys Lys Gly Gly Lys Pro Lys Leu Ser Leu 
                245                 250                 255     


Val Lys Thr Thr Asn Phe Ile Asn Glu Ala Pro Tyr Met Gln Asp Leu 
            260                 265                 270         


Glu His Cys Phe Ala Gln Thr Ala Tyr Ile Ser Ser Pro Glu Thr Gln 
        275                 280                 285             


Asp Ile Ile His Cys Ala Ala Leu Cys Glu Asp Thr Ile Leu Val Tyr 
    290                 295                 300                 


Gly His Ser Gln Phe Tyr Phe Asn Arg Tyr Glu Asp Leu Arg Leu His 
305                 310                 315                 320 


Phe Lys Gly Ala Ile Phe Pro Ile Glu Gly Gly Lys Ile Ser Gln Val 
                325                 330                 335     


Thr Val Asn 
            


<210>  49
<211>  87
<212>  PRT
<213>  Ljungan virus 145SL


<220>
<221>  misc_feature
<223>  Polyprotein from position 1761 to 1847

<400>  49

Ile Ala Gly Asn Gly Gln Val Ala Arg Ala Ala Ala Val His Phe Ile 
1               5                   10                  15      


Ser Asn Gly Ala Ser Gly Phe Met Asp Gln Gly Val Val Val Ala Lys 
            20                  25                  30          


Glu Lys Met Gln Lys Pro Ile Tyr Leu Pro Ser Lys Thr Ala Leu Asn 
        35                  40                  45              


Pro Ser Pro Leu Asn Gly Val Val Pro Val Lys Met Glu Pro Ala Val 
    50                  55                  60                  


Leu Ser Pro His Asp Val Arg Leu Glu Val Ile Met Pro Ser Val Val 
65                  70                  75                  80  


Lys Asn Ala Ala Ala Lys Tyr 
                85          


<210>  50
<211>  471
<212>  PRT
<213>  Ljungan virus 145SL


<220>
<221>  misc_feature
<223>  Polyprotein from position 351to 821

<400>  50

Trp Ser His Thr His Ser Pro Ile Asn Trp Val Phe Asp Gly Gly Ile 
1               5                   10                  15      


His Leu Glu Asp Met Pro Asn Leu Asn Leu Phe Ser Ser Cys Tyr Asn 
            20                  25                  30          


Tyr Trp Arg Gly Ser Ile Val Leu Lys Leu Thr Val Tyr Ala Ser Thr 
        35                  40                  45              


Phe Asn Lys Gly Arg Leu Arg Met Ala Phe Phe Pro Asn His Asp Ala 
    50                  55                  60                  


Arg Tyr Thr Glu Glu Glu Ala Gln Asn Ala Ile Phe Met Val Cys Asp 
65                  70                  75                  80  


Ile Gly Leu Asn Asn Thr Phe Glu Met Thr Ile Pro Tyr Thr Trp Gly 
                85                  90                  95      


Asn Trp Met Arg Pro Thr Arg Gly Ser Val Ile Gly Trp Leu Arg Ile 
            100                 105                 110         


Asp Val Leu Asn Arg Leu Thr Tyr Asn Ser Ser Ser Pro Asn Ala Val 
        115                 120                 125             


Asn Cys Ile Leu Gln Val Lys Met Gly Asn Asp Ala Lys Phe Met Val 
    130                 135                 140                 


Pro Thr Thr Ser Asn Ile Val Trp Glu Gly Leu His Ser Trp Gly Ser 
145                 150                 155                 160 


Glu Met Asp Leu Leu Asp Ser Leu Asp Asn Pro Glu Glu Ile Gln Asp 
                165                 170                 175     


Met Glu Glu Pro Glu Ser Glu Asn Val Glu Ala Ala Gln Gly Glu Glu 
            180                 185                 190         


Ala Ala Thr Ala Val Gly Leu Arg Ala Thr Glu Asn Asp Gly Ser Leu 
        195                 200                 205             


Ser Glu Gln Gln Asn Met Ala Gln Pro Met Phe Leu Asn Phe Lys Gln 
    210                 215                 220                 


His Arg Val Asp Ile Tyr Ser Ala Ser His Thr Lys Val Asp His Ile 
225                 230                 235                 240 


Phe Gly Arg Ala Trp Ala Val Gly Ile Phe Asn Val Thr Asn Ala Asn 
                245                 250                 255     


Ile Ser Lys Phe Asp Leu Asn Phe Pro Thr Thr Thr His Gly Ala Leu 
            260                 265                 270         


Cys Arg Phe Phe Cys Phe Trp Thr Gly Glu Leu Asn Leu His Ile Leu 
        275                 280                 285             


Asn Ile Ser Ser Ser Asn Ala Pro Val Lys Val Ala His Thr Trp Phe 
    290                 295                 300                 


Gly Thr Asp Ser Gly Ile Ala Arg Thr Ala Thr Leu Glu Ser Asn Gly 
305                 310                 315                 320 


Val Ile Ile Ile Pro Pro Asn Glu Gln Met Thr Leu Cys Ile Pro Tyr 
                325                 330                 335     


Tyr Ser Glu Ala Pro Leu Arg Cys Val Lys Gly Pro His Ser Ala Gly 
            340                 345                 350         


Ala Gly Leu Gly Ser Ile Phe Thr Gln Cys Ile Gly Asn Ser Val Asn 
        355                 360                 365             


Asn Arg Ile Gln Ile Phe Val Ser Phe Arg Cys Pro Asn Phe Phe Phe 
    370                 375                 380                 


Pro Leu Pro Ala Pro His Glu Ala Ser Ser Arg Ser Ile Leu Gln Arg 
385                 390                 395                 400 


Ile Ser Thr Ala Ser Ala Asp Glu Leu Glu Ala Val Leu Asp Ala Lys 
                405                 410                 415     


Thr Pro Asp Ala Pro Val Arg Leu Cys Tyr Gln Pro Glu Asp Pro Leu 
            420                 425                 430         


Arg Gln Leu Arg Glu Ala Ala Lys Ala Tyr Phe Asn Ile Met His Asn 
        435                 440                 445             


Asp Glu Met Asp Tyr Ser Gly Gly Lys Phe Leu Asn Gln Cys Gly Asp 
    450                 455                 460                 


Val Glu Ser Asn Pro Gly Pro 
465                 470     


<210>  51
<211>  44
<212>  PRT
<213>  Ljungan virus 145SL


<220>
<221>  misc_feature
<223>  Polyprotein from  position 1978 to 2021

<400>  51

Val Ile Ala Tyr Arg Val Val Met Ser Ser Leu Tyr Glu Ala Ile Tyr 
1               5                   10                  15      


Gln Thr Pro Ala Gln Glu Leu Gly Leu Ala Val Gly Met Asn Pro Trp 
            20                  25                  30          


Thr Asp Trp Asp Pro Met Ile Asn Val Leu Gln Pro 
        35                  40                  


<210>  52
<211>  52
<212>  PRT
<213>  artificial

<220>
<223>  Consensus Contig3177


<220>
<221>  misc_feature
<222>  (1)..(5)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (7)..(9)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (12)..(13)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (15)..(15)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (17)..(19)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (23)..(27)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (29)..(33)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (35)..(41)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (43)..(45)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (47)..(52)
<223>  Xaa can be any naturally occurring amino acid

<400>  52

Xaa Xaa Xaa Xaa Xaa Glu Xaa Xaa Xaa Asn Asp Xaa Xaa Lys Xaa Ile 
1               5                   10                  15      


Xaa Xaa Xaa Leu Val Arg Xaa Xaa Xaa Xaa Xaa Val Xaa Xaa Xaa Xaa 
            20                  25                  30          


Xaa Pro Xaa Xaa Xaa Xaa Xaa Xaa Xaa Leu Xaa Xaa Xaa Leu Xaa Xaa 
        35                  40                  45              


Xaa Xaa Xaa Xaa 
    50          


<210>  53
<211>  83
<212>  PRT
<213>  artificial

<220>
<223>  Consensus Contig13129


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (4)..(5)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (9)..(9)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (11)..(15)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (18)..(18)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (21)..(38)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (40)..(43)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (45)..(47)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (50)..(56)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (58)..(58)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (60)..(60)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (62)..(63)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (65)..(72)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (74)..(79)
<223>  Xaa can be any naturally occurring amino acid

<400>  53

Xaa Asn Gly Xaa Xaa Met Asp Leu Xaa Leu Xaa Xaa Xaa Xaa Xaa Leu 
1               5                   10                  15      


Pro Xaa Thr Phe Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa 
            20                  25                  30          


Xaa Xaa Xaa Xaa Xaa Xaa Trp Xaa Xaa Xaa Xaa Gly Xaa Xaa Xaa Met 
        35                  40                  45              


Pro Xaa Xaa Xaa Xaa Xaa Xaa Xaa Gly Xaa Val Xaa Thr Xaa Xaa Gly 
    50                  55                  60                  


Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Tyr Xaa Xaa Xaa Xaa Xaa Xaa Gly 
65                  70                  75                  80  


Met Cys Gly 
            


<210>  54
<211>  227
<212>  PRT
<213>  artificial

<220>
<223>  Consensus Contig51104


<220>
<221>  misc_feature
<222>  (1)..(3)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (5)..(8)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (10)..(12)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (14)..(16)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (18)..(18)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (20)..(30)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (32)..(32)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (37)..(37)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (39)..(39)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (42)..(42)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (44)..(44)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (48)..(48)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (50)..(51)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (53)..(57)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (59)..(64)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (67)..(68)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (70)..(73)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (75)..(75)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (79)..(79)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (81)..(87)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (90)..(103)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (106)..(107)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (110)..(110)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (112)..(114)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (117)..(117)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (119)..(119)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (124)..(126)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (128)..(129)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (133)..(134)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (136)..(136)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (138)..(140)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (145)..(149)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (151)..(151)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (153)..(167)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (169)..(170)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (172)..(172)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (176)..(177)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (179)..(179)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (182)..(184)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (192)..(194)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (197)..(197)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (199)..(199)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (203)..(203)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (205)..(205)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (207)..(215)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (217)..(217)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (219)..(219)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (221)..(224)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (226)..(226)
<223>  Xaa can be any naturally occurring amino acid

<400>  54

Xaa Xaa Xaa Thr Xaa Xaa Xaa Xaa Val Xaa Xaa Xaa Leu Xaa Xaa Xaa 
1               5                   10                  15      


Thr Xaa Glu Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Ser Xaa 
            20                  25                  30          


Thr Thr Asn Ala Xaa Asn Xaa Val Gln Xaa Ser Xaa Ala Pro Thr Xaa 
        35                  40                  45              


Pro Xaa Xaa Pro Xaa Xaa Xaa Xaa Xaa Asp Xaa Xaa Xaa Xaa Xaa Xaa 
    50                  55                  60                  


Tyr Ser Xaa Xaa Thr Xaa Xaa Xaa Xaa Pro Xaa Lys Met Val Xaa Leu 
65                  70                  75                  80  


Xaa Xaa Xaa Xaa Xaa Xaa Xaa Thr Trp Xaa Xaa Xaa Xaa Xaa Xaa Xaa 
                85                  90                  95      


Xaa Xaa Xaa Xaa Xaa Xaa Xaa Leu Pro Xaa Xaa Phe Trp Xaa Asn Xaa 
            100                 105                 110         


Xaa Xaa Pro Ala Xaa Gly Xaa Ser Arg Tyr Phe Xaa Xaa Xaa Arg Xaa 
        115                 120                 125             


Xaa Phe His Ile Xaa Xaa Gln Xaa Asn Xaa Xaa Xaa Gly Ser Ala Gly 
    130                 135                 140                 


Xaa Xaa Xaa Xaa Xaa Tyr Xaa Pro Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa 
145                 150                 155                 160 


Xaa Xaa Xaa Xaa Xaa Xaa Xaa Thr Xaa Xaa Asn Xaa Pro His Val Xaa 
                165                 170                 175     


Xaa Asn Xaa Ala Thr Xaa Xaa Xaa Ala Asp Leu Tyr Ile Pro Tyr Xaa 
            180                 185                 190         


Xaa Xaa His Asn Xaa Ala Xaa Thr Asp Ser Xaa Asp Xaa Gly Xaa Xaa 
        195                 200                 205             


Xaa Xaa Xaa Xaa Xaa Xaa Xaa Leu Xaa Val Xaa Ser Xaa Xaa Xaa Xaa 
    210                 215                 220                 


Thr Xaa Asp 
225         


<210>  55
<211>  88
<212>  PRT
<213>  artificial

<220>
<223>  Consensus Contig51912


<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (4)..(6)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (11)..(11)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (13)..(14)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (17)..(17)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (21)..(24)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (26)..(35)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (37)..(41)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (43)..(43)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (45)..(45)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (58)..(59)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (69)..(70)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (72)..(73)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (82)..(82)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (85)..(86)
<223>  Xaa can be any naturally occurring amino acid

<400>  55

Thr Xaa Asp Xaa Xaa Xaa Phe Gly Ser Leu Xaa Asp Xaa Xaa Phe Gln 
1               5                   10                  15      


Xaa Pro Arg Pro Xaa Xaa Xaa Xaa Thr Xaa Xaa Xaa Xaa Xaa Xaa Xaa 
            20                  25                  30          


Xaa Xaa Xaa Arg Xaa Xaa Xaa Xaa Xaa Lys Xaa Lys Xaa Thr Arg Asn 
        35                  40                  45              


Lys Ile Asp Ile Ala Glu Gly Pro Gly Xaa Xaa Asn Ile Ala Asn Val 
    50                  55                  60                  


Leu Ser Thr Thr Xaa Xaa Gln Xaa Xaa Ala Leu Val Gly Glu Arg Ala 
65                  70                  75                  80  


Phe Xaa Asp Pro Xaa Xaa Ala Gly 
                85              


<210>  56
<211>  73
<212>  PRT
<213>  artificial

<220>
<223>  Consensus Contig52512


<220>
<221>  misc_feature
<222>  (2)..(7)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (9)..(12)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (15)..(16)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (18)..(21)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (24)..(25)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (27)..(27)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (29)..(29)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (31)..(33)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (36)..(38)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (40)..(40)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (42)..(51)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (53)..(56)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (58)..(60)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (62)..(64)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (66)..(73)
<223>  Xaa can be any naturally occurring amino acid

<400>  56

Lys Xaa Xaa Xaa Xaa Xaa Xaa Pro Xaa Xaa Xaa Xaa Pro Phe Xaa Xaa 
1               5                   10                  15      


Gln Xaa Xaa Xaa Xaa Phe Asn Xaa Xaa Ser Xaa Ser Xaa Arg Xaa Xaa 
            20                  25                  30          


Xaa Trp Trp Xaa Xaa Xaa Phe Xaa Lys Xaa Xaa Xaa Xaa Xaa Xaa Xaa 
        35                  40                  45              


Xaa Xaa Xaa Pro Xaa Xaa Xaa Xaa Lys Xaa Xaa Xaa Trp Xaa Xaa Xaa 
    50                  55                  60                  


Asn Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa 
65                  70              


<210>  57
<211>  88
<212>  PRT
<213>  artificial

<220>
<223>  Consensus Contig59674


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (6)..(9)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (12)..(20)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (22)..(25)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (28)..(28)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (30)..(32)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (34)..(42)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (46)..(47)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (49)..(49)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (54)..(54)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (56)..(56)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (58)..(62)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (69)..(69)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (71)..(71)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (74)..(78)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (81)..(84)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (86)..(86)
<223>  Xaa can be any naturally occurring amino acid

<400>  57

Xaa Ala Gly Asn Gly Xaa Xaa Xaa Xaa Ala Ala Xaa Xaa Xaa Xaa Xaa 
1               5                   10                  15      


Xaa Xaa Xaa Xaa Ser Xaa Xaa Xaa Xaa Gln Gly Xaa Val Xaa Xaa Xaa 
            20                  25                  30          


Lys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Pro Ser Lys Xaa Xaa Leu 
        35                  40                  45              


Xaa Pro Ser Pro Leu Xaa Gly Xaa Val Xaa Xaa Xaa Xaa Xaa Pro Ala 
    50                  55                  60                  


Val Leu Ser Pro Xaa Asp Xaa Arg Leu Xaa Xaa Xaa Xaa Xaa Ser Val 
65                  70                  75                  80  


Xaa Xaa Xaa Xaa Ala Xaa Lys Tyr 
                85              


<210>  58
<211>  344
<212>  PRT
<213>  artificial

<220>
<223>  Consensus Contig53438


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (11)..(15)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (17)..(18)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (20)..(20)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (23)..(23)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (28)..(32)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (35)..(40)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (42)..(44)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (48)..(50)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (52)..(52)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (54)..(55)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (58)..(59)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (62)..(66)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (68)..(69)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (71)..(76)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (79)..(81)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (83)..(87)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (90)..(95)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (97)..(101)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (103)..(139)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (141)..(146)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (148)..(170)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (172)..(172)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (174)..(174)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (177)..(179)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (181)..(183)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (185)..(186)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (188)..(197)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (200)..(200)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (204)..(204)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (206)..(213)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (215)..(215)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (217)..(217)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (219)..(232)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (234)..(237)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (239)..(239)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (242)..(242)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (246)..(253)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (255)..(258)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (260)..(260)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (262)..(271)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (274)..(278)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (280)..(288)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (290)..(296)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (298)..(299)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (301)..(306)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (308)..(308)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (310)..(310)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (312)..(317)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (320)..(323)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (325)..(327)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (329)..(330)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (332)..(343)
<223>  Xaa can be any naturally occurring amino acid

<400>  58

Xaa Val Ile Ala Thr Thr Asn Lys Ser Asp Xaa Xaa Xaa Xaa Xaa Leu 
1               5                   10                  15      


Xaa Xaa Pro Xaa Ala Leu Xaa Arg Arg Phe Pro Xaa Xaa Xaa Xaa Xaa 
            20                  25                  30          


Arg Ala Xaa Xaa Xaa Xaa Xaa Xaa Lys Xaa Xaa Xaa Leu Asp Val Xaa 
        35                  40                  45              


Xaa Xaa Met Xaa Ala Xaa Xaa Asp Gly Xaa Xaa Trp Glu Xaa Xaa Xaa 
    50                  55                  60                  


Xaa Xaa Gly Xaa Xaa Trp Xaa Xaa Xaa Xaa Xaa Xaa Asp Leu Xaa Xaa 
65                  70                  75                  80  


Xaa Ile Xaa Xaa Xaa Xaa Xaa Gln Arg Xaa Xaa Xaa Xaa Xaa Xaa Trp 
                85                  90                  95      


Xaa Xaa Xaa Xaa Xaa Gln Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa 
            100                 105                 110         


Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa 
        115                 120                 125             


Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Glu Xaa Xaa Xaa Xaa 
    130                 135                 140                 


Xaa Xaa Asp Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa 
145                 150                 155                 160 


Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Val Xaa Pro Xaa Leu Lys 
                165                 170                 175     


Xaa Xaa Xaa Ala Xaa Xaa Xaa Val Xaa Xaa Trp Xaa Xaa Xaa Xaa Xaa 
            180                 185                 190         


Xaa Xaa Xaa Xaa Xaa Phe Val Xaa Arg Asn Lys Xaa Trp Xaa Xaa Xaa 
        195                 200                 205             


Xaa Xaa Xaa Xaa Xaa Ser Xaa Leu Xaa Ile Xaa Xaa Xaa Xaa Xaa Xaa 
    210                 215                 220                 


Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Glu Xaa Xaa Xaa Xaa Arg Xaa Tyr 
225                 230                 235                 240 


Asn Xaa Gln Thr Ala Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Lys Xaa Xaa 
                245                 250                 255     


Xaa Xaa Lys Xaa Thr Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Pro 
            260                 265                 270         


Tyr Xaa Xaa Xaa Xaa Xaa His Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa 
        275                 280                 285             


Ser Xaa Xaa Xaa Xaa Xaa Xaa Xaa His Xaa Xaa Ala Xaa Xaa Xaa Xaa 
    290                 295                 300                 


Xaa Xaa Leu Xaa Tyr Xaa His Xaa Xaa Xaa Xaa Xaa Xaa Arg Tyr Xaa 
305                 310                 315                 320 


Xaa Xaa Xaa Leu Xaa Xaa Xaa Gly Xaa Xaa Phe Xaa Xaa Xaa Xaa Xaa 
                325                 330                 335     


Xaa Xaa Xaa Xaa Xaa Xaa Xaa Asn 
            340                 


<210>  59
<211>  44
<212>  PRT
<213>  artificial

<220>
<223>  Consensus Contig67601


<220>
<221>  misc_feature
<222>  (2)..(6)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (8)..(10)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (12)..(15)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (17)..(21)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (23)..(23)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (25)..(25)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (29)..(29)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (31)..(33)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (36)..(42)
<223>  Xaa can be any naturally occurring amino acid

<400>  59

Val Xaa Xaa Xaa Xaa Xaa Val Xaa Xaa Xaa Leu Xaa Xaa Xaa Xaa Tyr 
1               5                   10                  15      


Xaa Xaa Xaa Xaa Xaa Glu Xaa Gly Xaa Ala Val Gly Xaa Asn Xaa Xaa 
            20                  25                  30          


Xaa Asp Trp Xaa Xaa Xaa Xaa Xaa Xaa Xaa Gln Pro 
        35                  40                  


<210>  60
<211>  483
<212>  PRT
<213>  artificial

<220>
<223>  Consensus Contig77653


<220>
<221>  misc_feature
<222>  (2)..(4)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (6)..(6)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (8)..(13)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (15)..(16)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (18)..(24)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (27)..(29)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (31)..(32)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (34)..(35)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (41)..(43)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (46)..(47)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (50)..(50)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (52)..(53)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (58)..(60)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (64)..(72)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (74)..(76)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (79)..(79)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (85)..(88)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (90)..(91)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (93)..(93)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (95)..(95)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (97)..(98)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (101)..(101)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (103)..(106)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (109)..(115)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (117)..(118)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (121)..(122)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (124)..(125)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (127)..(127)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (129)..(131)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (133)..(133)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (135)..(135)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (137)..(138)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (140)..(140)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (142)..(143)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (145)..(146)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (148)..(157)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (159)..(159)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (163)..(163)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (166)..(167)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (169)..(169)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (172)..(173)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (175)..(178)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (180)..(183)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (186)..(192)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (194)..(196)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (198)..(200)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (203)..(205)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (210)..(213)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (215)..(215)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (217)..(217)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (219)..(219)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (221)..(221)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (223)..(223)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (225)..(231)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (233)..(236)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (238)..(240)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (242)..(243)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (247)..(247)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (249)..(249)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (251)..(253)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (255)..(262)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (264)..(265)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (267)..(269)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (271)..(274)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (277)..(279)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (282)..(282)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (285)..(285)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (288)..(288)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (290)..(290)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (292)..(293)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (295)..(297)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (299)..(300)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (302)..(303)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (305)..(305)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (307)..(312)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (314)..(321)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (323)..(324)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (326)..(326)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (329)..(329)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (332)..(332)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (334)..(339)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (341)..(341)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (344)..(345)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (349)..(349)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (351)..(380)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (382)..(382)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (384)..(384)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (386)..(386)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (389)..(391)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (393)..(393)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (395)..(406)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (408)..(412)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (414)..(417)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (419)..(420)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (422)..(425)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (427)..(432)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (434)..(446)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (448)..(449)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (451)..(455)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (457)..(461)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (463)..(463)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (465)..(472)
<223>  Xaa can be any naturally occurring amino acid

<220>
<221>  misc_feature
<222>  (479)..(479)
<223>  Xaa can be any naturally occurring amino acid

<400>  60

Trp Xaa Xaa Xaa His Xaa Pro Xaa Xaa Xaa Xaa Xaa Xaa Phe Xaa Xaa 
1               5                   10                  15      


Gly Xaa Xaa Xaa Xaa Xaa Xaa Xaa Asn Leu Xaa Xaa Xaa Ser Xaa Xaa 
            20                  25                  30          


Tyr Xaa Xaa Trp Arg Gly Ser Ile Xaa Xaa Xaa Leu Thr Xaa Xaa Ala 
        35                  40                  45              


Ser Xaa Phe Xaa Xaa Gly Arg Leu Arg Xaa Xaa Xaa Phe Pro Asn Xaa 
    50                  55                  60                  


Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Ala Xaa Xaa Xaa Ile Phe Xaa Val 
65                  70                  75                  80  


Cys Asp Ile Gly Xaa Xaa Xaa Xaa Phe Xaa Xaa Thr Xaa Pro Xaa Thr 
                85                  90                  95      


Xaa Xaa Asn Trp Xaa Arg Xaa Xaa Xaa Xaa Ser Val Xaa Xaa Xaa Xaa 
            100                 105                 110         


Xaa Xaa Xaa Val Xaa Xaa Arg Leu Xaa Xaa Asn Xaa Xaa Ser Xaa Asn 
        115                 120                 125             


Xaa Xaa Xaa Cys Xaa Leu Xaa Val Xaa Xaa Gly Xaa Asp Xaa Xaa Phe 
    130                 135                 140                 


Xaa Xaa Pro Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa His Xaa Trp 
145                 150                 155                 160 


Gly Ser Xaa Met Asp Xaa Xaa Asp Xaa Leu Asp Xaa Xaa Glu Xaa Xaa 
                165                 170                 175     


Xaa Xaa Asp Xaa Xaa Xaa Xaa Glu Ser Xaa Xaa Xaa Xaa Xaa Xaa Xaa 
            180                 185                 190         


Gly Xaa Xaa Xaa Ala Xaa Xaa Xaa Gly Leu Xaa Xaa Xaa Glu Asn Asp 
        195                 200                 205             


Gly Xaa Xaa Xaa Xaa Gln Xaa Asn Xaa Ala Xaa Pro Xaa Phe Xaa Asn 
    210                 215                 220                 


Xaa Xaa Xaa Xaa Xaa Xaa Xaa Ile Xaa Xaa Xaa Xaa His Xaa Xaa Xaa 
225                 230                 235                 240 


Asp Xaa Xaa Phe Gly Arg Xaa Trp Xaa Val Xaa Xaa Xaa Asn Xaa Xaa 
                245                 250                 255     


Xaa Xaa Xaa Xaa Xaa Xaa Phe Xaa Xaa Asp Xaa Xaa Xaa Pro Xaa Xaa 
            260                 265                 270         


Xaa Xaa Gly Ala Xaa Xaa Xaa Phe Phe Xaa Phe Trp Xaa Gly Glu Xaa 
        275                 280                 285             


Asn Xaa His Xaa Xaa Asn Xaa Xaa Xaa Ser Xaa Xaa Pro Xaa Xaa Val 
    290                 295                 300                 


Xaa His Xaa Xaa Xaa Xaa Xaa Xaa Ser Xaa Xaa Xaa Xaa Xaa Xaa Xaa 
305                 310                 315                 320 


Xaa Glu Xaa Xaa Gly Xaa Ile Ile Xaa Pro Pro Xaa Glu Xaa Xaa Xaa 
                325                 330                 335     


Xaa Xaa Xaa Pro Xaa Tyr Ser Xaa Xaa Pro Leu Arg Xaa Val Xaa Xaa 
            340                 345                 350         


Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa 
        355                 360                 365             


Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Ser Xaa Arg Xaa 
    370                 375                 380                 


Pro Xaa Phe Phe Xaa Xaa Xaa Pro Xaa Pro Xaa Xaa Xaa Xaa Xaa Xaa 
385                 390                 395                 400 


Xaa Xaa Xaa Xaa Xaa Xaa Ser Xaa Xaa Xaa Xaa Xaa Glu Xaa Xaa Xaa 
                405                 410                 415     


Xaa Leu Xaa Xaa Lys Xaa Xaa Xaa Xaa Pro Xaa Xaa Xaa Xaa Xaa Xaa 
            420                 425                 430         


Pro Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Tyr Xaa 
        435                 440                 445             


Xaa Ile Xaa Xaa Xaa Xaa Xaa Asp Xaa Xaa Xaa Xaa Xaa Gly Xaa Lys 
    450                 455                 460                 


Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Gln Cys Gly Asp Val Glu Xaa Asn 
465                 470                 475                 480 


Pro Gly Pro 
            


<210>  61
<211>  891
<212>  DNA
<213>  Ljungan virus


<220>
<221>  misc_feature
<223>  VP1 sequence from position 2227 to 3117

<400>  61
ggtctgcact catggggttc agaaatggac ttggtggact ctctcgacaa tccagacgag       60

atacaagaca atgaggaaat acaaacccaa aatgtggagg ctgcacaagg ggaagaagct      120

gcgactgaag ttggtcttag ggcaacagaa aatgatggca gtctttcaga acaattgaat      180

atgagtcaac ccatgttcct gaattttaag aagcataaag tcaacatcta tgcagcatcc      240

cataccaaag ttgatcatat ttttggaaga gcttgggcag tgggggtttt taacacagaa      300

acagctgcca tacaaaaatt tgatttgcac tttccaactt ctactcatgg tgcattgtct      360

agatttttct gcttctggac tggagagtta aatattcaca ttttgaatgt gtcaaccaca      420

aatgcctttt tgaaagttgc tcacacatgg tttggcactg attctggaat tgcccggaca      480

gctactttgg aatcaaatgg aacaatgatt ataccaccaa acgagcaaat gacactttgt      540

gtaccctatt attctgaggt tccattaaga tgtgttaaag gttcagacag gaattcagcc      600

ggacttggtt ctctcttcac acaggctgtg ggcagaacaa tctctaatcg ggtacaaatc      660

tttgtgagct tccgctgtcc taattttttc ttcccactac ctgcgcccag ggaagccacg      720

tctcgaagca tattggaacg agtggatgaa gcaaatgcgg aagaacttga agctgtcttg      780

gaagctagaa caccagatgc accgctccgc ctcaagttta atccagaaga tcctttgaaa      840

caattgcggg aggcggccaa ggcttacttt aatataatgc acagtgatga a               891


<210>  62
<211>  702
<212>  DNA
<213>  Human parechovirus type 6


<220>
<221>  misc_feature
<223>  VP1 sequence from position 2060 to 2761

<400>  62
aattcttggg gctcacaaat ggacctcagc gacccactgt gtattgagga tgatgctgaa       60

aattgcaagc aaacaatatc cccaaatgaa ttaggtttaa catcagcaca agatgatgga      120

cctctaggtg gggaaaaacc aaactatttt ctaaatttta gaaccatgaa tgtggacatt      180

tttacggttt ctcatacaaa agtggacaat atatttggcc gtgcatggtt tgtaacaagt      240

catgatttta acaatgaggg acaatggccc ttagatttga cttttccatt tgaaggccat      300

ggttctttat cattattgtt cgcatacttc actggggaac taaatataca tgttctgttt      360

ttgtcagaca aaggcttctt gagggttgtt catacgtatg acaatactaa caataggtta      420

atcaacttgg cctctaatgg tgtgattacc ataccagctg gaaaacaaat gtcactgtca      480

gcccctttct attctcacaa gccattgagg acagtcaggg acactcacag cctaggtagg      540

ctcatttgca aaccattctt gactggaaca acatctggca ggatagaagt atacatgagc      600

cttaggtgtc caaatttttt cttccctgtt ccagctccaa aaaccacacc acgctcggaa      660

agtcgtgctc tacggggcga tatggccaat ttgacaaatc aa                         702


<210>  63
<211>  672
<212>  DNA
<213>  Human parechovirus type 11


<220>
<221>  misc_feature
<223>  VP1 protein gene

<400>  63
tgcatagaag atagtgctga ggactgtaaa caagcaatct ccccagatga gctgggcctg       60

acatctgctc aagatgatgg gccactcggt agtgaaaaac caaattattt tctgaatttt      120

agatccatga atgttgacat attcacagtt agtcatacta aagtggataa catttttggt      180

agggcttggt tctttgaagc acatgacttt gcaaatgatg gcacgtggag gcgtgaacta      240

accttcccaa agaaaggtca tggcatgtta tctcaatttt ttgcctattt cactggtgag      300

ataaacctcc atgtgttata tttgagtagt gaagggtttc tacgtgtggc acatacatat      360

gacactgaag ccaaaaggtc tgatttccta tcgtccaatg gggtcattac cataccggca      420

ggggaacaaa tgacattgtc tgcaccattc tactccaata aaccactaag gactgttaga      480

catgaggctg ctctgggcta tatcctgtgt aaaccaatgc tgactgggac agctcgaggt      540

agaattgaag tatacatcag tttaagatgc ccaaattttt tcttcccaat acctgcaccc      600

aaaccagtga acactcgccg agttggctta acggatgaaa gcccttatcg tcaccaacca      660

aaagataata ca                                                          672


<210>  64
<211>  678
<212>  DNA
<213>  Human parechovirus type 7


<220>
<221>  misc_feature
<223>  VP1 sequence from position 2141 to 2818

<400>  64
aattcatggg ggtcacaaat ggatctgaca gacccattag agatggagga ttgtactgag       60

gattgcaaac aatctctatc cccagatgaa ttgggcctca catcagccca agatgatgga      120

cctctcgggt ccgagaaacc aaattatttc ttaaatttta gggcaatgga tgttgatatt      180

ttcaccgcaa gccacactaa agtagataac atttttgggc gtgcctggta caactcacgg      240

catgaattca caaatggtga tctgtggcgt agttcattga ctttccctaa gaaaggccat      300

gggatgctat cacaactttt tgcatatttt acgggtgaag tgaatataca tatcctttat      360

atggctgaaa gaggatttct tagagtggca cactcatatg acactgagac acagagggat      420

gactttctat catcaaatgg tgtgataaca ataccagctg gagaacaaat gactttatct      480

gtaccatact actcaaataa accattgagg actataagac atgaatcagc acttggtttc      540

ttgttgtgtc aaccactttt atcaggtaca gacaggacta ttgcagaagt atatattagc      600

ttaaggtgtc caaacttttt ctttccagcg ccagcaccta gaccaattaa tactacacca      660

ataggctaca gtaacgaa                                                    678


<210>  65
<211>  678
<212>  DNA
<213>  Human parechovirus type 3


<220>
<221>  misc_feature
<223>  VP1 sequence from position 2335 to 3012

<400>  65
aattcgtggg gttcacaaat ggaccttaca gatccattgt gtattgagga caacatggaa       60

aattgtaaac agtccatatc accaaatgaa ttgggtttga cttcagctca agatgatggg      120

cctttgggta atgagaaacc aaattatttt ttaaacttca gaactatgaa tgttgacatt      180

tttacagtaa gtcataccaa agttgacaac atctttggta gagcttggta tgtgacgtct      240

catgacttta ataatggaga tacctggagg cagaaattaa catttccaaa agagggtcat      300

ggtatgttat cacagttttt tgcttatttt acaggagaaa taaatattca tatcctatat      360

atggcaaagc aggggttcct tagagtggct catacatatg acactgaaga taataggaaa      420

actttcttgt cttcaaatgg ggtaataact atccctgctg gtgagcagat gacactctca      480

gtaccttttt attcaaacaa gcctctgagg acagtgcgcc atgattcagc attaggtttt      540

cttatgtgta gaccatcgat gcacgggact acacgaacta ctgtagaagt ttatgttagt      600

ttaaggtgcc ccaatttctt tttccctgta ccagctccta aaccaactgg ttcaagggct      660

acagcacttt ctgatgag                                                    678


<210>  66
<211>  702
<212>  DNA
<213>  human parechovirus type 10


<220>
<221>  misc_feature
<223>  VP1 protein gene

<400>  66
ttccaaaatt cgtgggggtc acagatggat ttaactgacc ctttgtgtat tgaagatggc       60

actgaagatt gcaaacagga tatttcacct aatgagctgg gtctaacatc cgcccaggat      120

gatggaccat taggttctga gaaaccaaat tatttcttaa attttagagc tatgaatgtt      180

gatatattca ctgttagcca taccaaagtg gataatatat ttggtagagc ttggtatgtt      240

gactcacaca ctttcaacaa tggtgacatc tggagaagtt cacttacttt ccctaagaaa      300

ggccatggta tgttatccca attctttggt tatttcactg gggaattaaa tatccacata      360

ttatacatgg ctgaacaagg atttctcaga gtagcccata cgtatgacac tgaagtcaac      420

agggagaaat tcatttcttc aaatggggtt attactatac ctgctggaga acaaatgact      480

ttatcagtgc ccttttactc taataaacct ctcagaactg tccgggattc ggctgcactt      540

gggtttctac tctgtcagcc aatgctgcat gggacttcta gcaccatggc agaggtatac      600

atgagtctaa gatgtccaaa tttctttttc cctgtccctg ctcctaaacc agagaatacc      660

aaaaggtcat ttttgagtga tgaaagccca aatggtgatg at                         702


<210>  67
<211>  684
<212>  DNA
<213>  human parechovirus type 8


<220>
<221>  misc_feature
<223>  VP1 sequence from position 2323 to 3006

<400>  67
aattcctggg gttcacagat ggatttgagt gatccactct gcattgagga taaagtcgaa       60

gaatgcaaac agacattgtc cccaaatgaa ctaggcttga catccgctca agatgatggg      120

ccacttggca atgaaaaacc taattacttc ctcaacttta aagcaataaa tgtggatatt      180

ttcacagtga gccatacaaa agtggataat atttttggaa gggcatggta ttctatggct      240

catgaattta gaaatgaagg tttgtggagg actaaactta ctttcccaaa acaaggccac      300

ggtgcacttt cacaattttt tgcttattat actggagagt taaatatcca tgtactgttt      360

ttgtgtgaaa aaggttttct cagagtagct cacacatatg acagtgatga ggggcgagat      420

gacttcttgt catccaatgg agtcattacc ataccagctg gagagcaaat gtctctatct      480

gctccattct actcacacag gccattgaga acaattcgca atgaggatgc attaggatat      540

ttactatgtc aacctatgct tacaggaaca tcaagtggca agattgaggt gtatctcagc      600

ttgaggtgtc caaatctgtt ttttccaatc ccagcaccta agcctgccaa tgcattaagg      660

tcactcaacc catttagtga tgaa                                             684


<210>  68
<211>  696
<212>  DNA
<213>  human parechovirus type 5


<220>
<221>  misc_feature
<223>  VP1 sequence from position 1 to 696

<400>  68
aattcttggg gatcacaaat ggatttaagt gaccccttgt gcatggaggg tgatgaagct       60

gaggattgca aacaaactat atcacctgat gaattaggcc tcacttcagc acaagatgat      120

ggacctcttg gagtggagaa accaaattat tttttaaact ttagagctat taatgtagac      180

attttcactg tcagtcacac aaaggtggac aacatttttg gccgagcatg gttagccctt      240

gaacacactt ttgcagatga tgggacatgg agggcagatc taaactttcc cacacagggt      300

catggcactt taacaaggct attcacatat tattctggtg aactaaatgt gcatgtacta      360

tatctcagtg ataatgggtt tcttcgggta actcatgctt atgaccatga taatgatagg      420

tccaactttc tatcatccaa tggagtaatc acagtgccag caggtgaaca aatgacactt      480

tctgtgccat tctattcttc taaaccactt aggacaataa gagaatcagg tgcattgggt      540

aaattaatct gtaaaccatt gttgtctggc acacactcag gaaaaattga ggtctatctg      600

agtcttagat gccctaattt attctttccc tcccccgcac ctaaagagaa aacttctagg      660

gctttgcggg gtgatatggc aaatttcaca gatcag                                696


<210>  69
<211>  696
<212>  DNA
<213>  human parechovirus type 4


<220>
<221>  misc_feature
<223>  VP1 sequence from position 2342 to 3037

<400>  69
aattcgtggg gttctcagat ggacttgaca gacccactgt gtatagaaga tgattgcact       60

gaagattgta aacagacgat ttctccagat gaattaggtt taacatctgc acaagatgat      120

ggtcccctag gaggtgaaaa gccaaactac ttcctaaatt tcagagctgt taatgtagat      180

atattcactg tgagccacac taaggtggac aatatttttg gcagagcatg gttcgcttat      240

gaccatactt acagagatga aggaacttgg agacaggctc ttgatttccc aaagaaaggc      300

catggcgcac tgacccaatt gtttgcatac tattcaggcg aattaaacat acatgttttg      360

tttttgagcg agacagggtt tttgagagtg gcacacacct atgacagtga cacaaacaga      420

tctgatttct tttcttcaaa tggtgtcatc actgtcccag cgggagagca aatgactttg      480

tcagtaccat tctattcttc taaacctcta aggaccatta gagattcagc agcactggga      540

tatgtaatgt gtaaaccatt catgtctggg accacaggtg gaaaaataga aatttattta      600

agtctgaggt gtccaaattt gttttttcct ctccctgcgc ctaaacctac atctggtcgc      660

tcactgagag gtgatatggc acaattttct gatcag                                696


<210>  70
<211>  693
<212>  DNA
<213>  human parechovirus type 1


<220>
<221>  misc_feature
<223>  VP1 sequence from position 2292 to 2984

<400>  70
aattcatggg gttcacaaat ggatttgact gatccactat gtctggaaga atctgcagag       60

gaatgcaaac agactatatc accaaatgaa ttgggcttaa catcagctca ggatgatgga      120

ccattgggcg ataacaagcc aaattatttt ctaaatttca agtccatgaa tgtggatatc      180

ttcactgttt cccacactaa agtagacaac atatttggaa gagcttggtt ttaccaggaa      240

catactttca ccgatgaagg gcagtggaga gttaatttag agtttccgaa acaaggccat      300

ggttcgcttt ccttgttatt tgcttacttc acaggtgaat taaatattca tgttttgttc      360

ctagctgaaa agggatttct tagagtagcc cacacctatg acacatcagc aaacagagtt      420

aacttcctgt catccaatgg cgtcatcaca atcccagctg gagaacaaat gacattatct      480

gcaccctact actcaaataa accccttaga acagtcagag acgacaatag tcttgggtac      540

ttaatgtgta aaccattcct cactggaacg acaacaggga agatagaggt ttatcttagt      600

ttgagatgtc caaatttctt ctttcctctt cccgcaccta aggtttcaac tagccgtgct      660

ttgcggggtg acttggcaaa tttctcagac cag                                   693


<210>  71
<211>  699
<212>  DNA
<213>  human parechovirus type 2


<220>
<221>  misc_feature
<223>  VP1 sequence from position 2329 to 3027

<400>  71
aattcatggg gttcccaaat ggacttgact gacccgcttt gcatagaaga ttcagtagaa       60

gattgtaagc aaaccattac accaacagaa ttgggactaa cctcagcaca agatgatggc      120

cctttaggaa atgacaaacc aaattatttt cttaacttta agtctatgaa tgttgatatc      180

tttactgtca gtcacaccaa agtagacaat atttttggac gtgcttggtt tgcccatgtt      240

catgacttca ctaatgatgg cctatggaga cagggattgg aatttccaaa ggaagggcac      300

ggtgccctat cacttctgtt tgcctacttt actggtgaat taaacatcca tgttctattt      360

cttagtgata ggggttttct cagagttgga catacatatg acactgagac aaacagaacc      420

aattttttat catccagtgg cataattaca gtaccagcag gagaacagat gacactatct      480

gtcccctctt attccaacaa gccattacgg acagttagat catccaatgc tttaggttat      540

ttactgtgta aaccattgct aactggtacc agctctggta gaatagagat attccttagc      600

ttgagatgtc caaatttctt ctttccctta ccagcaccaa aaccagcaac acgtaaatat      660

agaggagatt tggcaacatg gtctgaccaa agtccctat                             699


<210>  72
<211>  297
<212>  PRT
<213>  Ljungan virus


<220>
<221>  misc_feature
<223>  VP1 protein

<400>  72

Gly Leu His Ser Trp Gly Ser Glu Met Asp Leu Val Asp Ser Leu Asp 
1               5                   10                  15      


Asn Pro Asp Glu Ile Gln Asp Asn Glu Glu Ile Gln Thr Gln Asn Val 
            20                  25                  30          


Glu Ala Ala Gln Gly Glu Glu Ala Ala Thr Glu Val Gly Leu Arg Ala 
        35                  40                  45              


Thr Glu Asn Asp Gly Ser Leu Ser Glu Gln Leu Asn Met Ser Gln Pro 
    50                  55                  60                  


Met Phe Leu Asn Phe Lys Lys His Lys Val Asn Ile Tyr Ala Ala Ser 
65                  70                  75                  80  


His Thr Lys Val Asp His Ile Phe Gly Arg Ala Trp Ala Val Gly Val 
                85                  90                  95      


Phe Asn Thr Glu Thr Ala Ala Ile Gln Lys Phe Asp Leu His Phe Pro 
            100                 105                 110         


Thr Ser Thr His Gly Ala Leu Ser Arg Phe Phe Cys Phe Trp Thr Gly 
        115                 120                 125             


Glu Leu Asn Ile His Ile Leu Asn Val Ser Thr Thr Asn Ala Phe Leu 
    130                 135                 140                 


Lys Val Ala His Thr Trp Phe Gly Thr Asp Ser Gly Ile Ala Arg Thr 
145                 150                 155                 160 


Ala Thr Leu Glu Ser Asn Gly Thr Met Ile Ile Pro Pro Asn Glu Gln 
                165                 170                 175     


Met Thr Leu Cys Val Pro Tyr Tyr Ser Glu Val Pro Leu Arg Cys Val 
            180                 185                 190         


Lys Gly Ser Asp Arg Asn Ser Ala Gly Leu Gly Ser Leu Phe Thr Gln 
        195                 200                 205             


Ala Val Gly Arg Thr Ile Ser Asn Arg Val Gln Ile Phe Val Ser Phe 
    210                 215                 220                 


Arg Cys Pro Asn Phe Phe Phe Pro Leu Pro Ala Pro Arg Glu Ala Thr 
225                 230                 235                 240 


Ser Arg Ser Ile Leu Glu Arg Val Asp Glu Ala Asn Ala Glu Glu Leu 
                245                 250                 255     


Glu Ala Val Leu Glu Ala Arg Thr Pro Asp Ala Pro Leu Arg Leu Lys 
            260                 265                 270         


Phe Asn Pro Glu Asp Pro Leu Lys Gln Leu Arg Glu Ala Ala Lys Ala 
        275                 280                 285             


Tyr Phe Asn Ile Met His Ser Asp Glu 
    290                 295         


<210>  73
<211>  224
<212>  PRT
<213>  human parechovirus type 11


<220>
<221>  misc_feature
<223>  VP1 protein

<400>  73

Cys Ile Glu Asp Ser Ala Glu Asp Cys Lys Gln Ala Ile Ser Pro Asp 
1               5                   10                  15      


Glu Leu Gly Leu Thr Ser Ala Gln Asp Asp Gly Pro Leu Gly Ser Glu 
            20                  25                  30          


Lys Pro Asn Tyr Phe Leu Asn Phe Arg Ser Met Asn Val Asp Ile Phe 
        35                  40                  45              


Thr Val Ser His Thr Lys Val Asp Asn Ile Phe Gly Arg Ala Trp Phe 
    50                  55                  60                  


Phe Glu Ala His Asp Phe Ala Asn Asp Gly Thr Trp Arg Arg Glu Leu 
65                  70                  75                  80  


Thr Phe Pro Lys Lys Gly His Gly Met Leu Ser Gln Phe Phe Ala Tyr 
                85                  90                  95      


Phe Thr Gly Glu Ile Asn Leu His Val Leu Tyr Leu Ser Ser Glu Gly 
            100                 105                 110         


Phe Leu Arg Val Ala His Thr Tyr Asp Thr Glu Ala Lys Arg Ser Asp 
        115                 120                 125             


Phe Leu Ser Ser Asn Gly Val Ile Thr Ile Pro Ala Gly Glu Gln Met 
    130                 135                 140                 


Thr Leu Ser Ala Pro Phe Tyr Ser Asn Lys Pro Leu Arg Thr Val Arg 
145                 150                 155                 160 


His Glu Ala Ala Leu Gly Tyr Ile Leu Cys Lys Pro Met Leu Thr Gly 
                165                 170                 175     


Thr Ala Arg Gly Arg Ile Glu Val Tyr Ile Ser Leu Arg Cys Pro Asn 
            180                 185                 190         


Phe Phe Phe Pro Ile Pro Ala Pro Lys Pro Val Asn Thr Arg Arg Val 
        195                 200                 205             


Gly Leu Thr Asp Glu Ser Pro Tyr Arg His Gln Pro Lys Asp Asn Thr 
    210                 215                 220                 


<210>  74
<211>  226
<212>  PRT
<213>  human parechovirus type 7


<220>
<221>  misc_feature
<223>  VP1 sequence from position 544 to 769

<400>  74

Asn Ser Trp Gly Ser Gln Met Asp Leu Thr Asp Pro Leu Glu Met Glu 
1               5                   10                  15      


Asp Cys Thr Glu Asp Cys Lys Gln Ser Leu Ser Pro Asp Glu Leu Gly 
            20                  25                  30          


Leu Thr Ser Ala Gln Asp Asp Gly Pro Leu Gly Ser Glu Lys Pro Asn 
        35                  40                  45              


Tyr Phe Leu Asn Phe Arg Ala Met Asp Val Asp Ile Phe Thr Ala Ser 
    50                  55                  60                  


His Thr Lys Val Asp Asn Ile Phe Gly Arg Ala Trp Tyr Asn Ser Arg 
65                  70                  75                  80  


His Glu Phe Thr Asn Gly Asp Leu Trp Arg Ser Ser Leu Thr Phe Pro 
                85                  90                  95      


Lys Lys Gly His Gly Met Leu Ser Gln Leu Phe Ala Tyr Phe Thr Gly 
            100                 105                 110         


Glu Val Asn Ile His Ile Leu Tyr Met Ala Glu Arg Gly Phe Leu Arg 
        115                 120                 125             


Val Ala His Ser Tyr Asp Thr Glu Thr Gln Arg Asp Asp Phe Leu Ser 
    130                 135                 140                 


Ser Asn Gly Val Ile Thr Ile Pro Ala Gly Glu Gln Met Thr Leu Ser 
145                 150                 155                 160 


Val Pro Tyr Tyr Ser Asn Lys Pro Leu Arg Thr Ile Arg His Glu Ser 
                165                 170                 175     


Ala Leu Gly Phe Leu Leu Cys Gln Pro Leu Leu Ser Gly Thr Asp Arg 
            180                 185                 190         


Thr Ile Ala Glu Val Tyr Ile Ser Leu Arg Cys Pro Asn Phe Phe Phe 
        195                 200                 205             


Pro Ala Pro Ala Pro Arg Pro Ile Asn Thr Thr Pro Ile Gly Tyr Ser 
    210                 215                 220                 


Asn Glu 
225     


<210>  75
<211>  226
<212>  PRT
<213>  human parechovirus type 3


<220>
<221>  misc_feature
<223>  VP1 sequence from position 546 to 771

<400>  75

Asn Ser Trp Gly Ser Gln Met Asp Leu Thr Asp Pro Leu Cys Ile Glu 
1               5                   10                  15      


Asp Asn Met Glu Asn Cys Lys Gln Ser Ile Ser Pro Asn Glu Leu Gly 
            20                  25                  30          


Leu Thr Ser Ala Gln Asp Asp Gly Pro Leu Gly Asn Glu Lys Pro Asn 
        35                  40                  45              


Tyr Phe Leu Asn Phe Arg Thr Met Asn Val Asp Ile Phe Thr Val Ser 
    50                  55                  60                  


His Thr Lys Val Asp Asn Ile Phe Gly Arg Ala Trp Tyr Val Thr Ser 
65                  70                  75                  80  


His Asp Phe Asn Asn Gly Asp Thr Trp Arg Gln Lys Leu Thr Phe Pro 
                85                  90                  95      


Lys Glu Gly His Gly Met Leu Ser Gln Phe Phe Ala Tyr Phe Thr Gly 
            100                 105                 110         


Glu Ile Asn Ile His Ile Leu Tyr Met Ala Lys Gln Gly Phe Leu Arg 
        115                 120                 125             


Val Ala His Thr Tyr Asp Thr Glu Asp Asn Arg Lys Thr Phe Leu Ser 
    130                 135                 140                 


Ser Asn Gly Val Ile Thr Ile Pro Ala Gly Glu Gln Met Thr Leu Ser 
145                 150                 155                 160 


Val Pro Phe Tyr Ser Asn Lys Pro Leu Arg Thr Val Arg His Asp Ser 
                165                 170                 175     


Ala Leu Gly Phe Leu Met Cys Arg Pro Ser Met His Gly Thr Thr Arg 
            180                 185                 190         


Thr Thr Val Glu Val Tyr Val Ser Leu Arg Cys Pro Asn Phe Phe Phe 
        195                 200                 205             


Pro Val Pro Ala Pro Lys Pro Thr Gly Ser Arg Ala Thr Ala Leu Ser 
    210                 215                 220                 


Asp Glu 
225     


<210>  76
<211>  234
<212>  PRT
<213>  human parechovirus type 10


<220>
<221>  misc_feature
<223>  VP1 protein

<400>  76

Phe Gln Asn Ser Trp Gly Ser Gln Met Asp Leu Thr Asp Pro Leu Cys 
1               5                   10                  15      


Ile Glu Asp Gly Thr Glu Asp Cys Lys Gln Asp Ile Ser Pro Asn Glu 
            20                  25                  30          


Leu Gly Leu Thr Ser Ala Gln Asp Asp Gly Pro Leu Gly Ser Glu Lys 
        35                  40                  45              


Pro Asn Tyr Phe Leu Asn Phe Arg Ala Met Asn Val Asp Ile Phe Thr 
    50                  55                  60                  


Val Ser His Thr Lys Val Asp Asn Ile Phe Gly Arg Ala Trp Tyr Val 
65                  70                  75                  80  


Asp Ser His Thr Phe Asn Asn Gly Asp Ile Trp Arg Ser Ser Leu Thr 
                85                  90                  95      


Phe Pro Lys Lys Gly His Gly Met Leu Ser Gln Phe Phe Gly Tyr Phe 
            100                 105                 110         


Thr Gly Glu Leu Asn Ile His Ile Leu Tyr Met Ala Glu Gln Gly Phe 
        115                 120                 125             


Leu Arg Val Ala His Thr Tyr Asp Thr Glu Val Asn Arg Glu Lys Phe 
    130                 135                 140                 


Ile Ser Ser Asn Gly Val Ile Thr Ile Pro Ala Gly Glu Gln Met Thr 
145                 150                 155                 160 


Leu Ser Val Pro Phe Tyr Ser Asn Lys Pro Leu Arg Thr Val Arg Asp 
                165                 170                 175     


Ser Ala Ala Leu Gly Phe Leu Leu Cys Gln Pro Met Leu His Gly Thr 
            180                 185                 190         


Ser Ser Thr Met Ala Glu Val Tyr Met Ser Leu Arg Cys Pro Asn Phe 
        195                 200                 205             


Phe Phe Pro Val Pro Ala Pro Lys Pro Glu Asn Thr Lys Arg Ser Phe 
    210                 215                 220                 


Leu Ser Asp Glu Ser Pro Asn Gly Asp Asp 
225                 230                 


<210>  77
<211>  228
<212>  PRT
<213>  human parechovirus type 8


<220>
<221>  misc_feature
<223>  VP1 sequence from position 540 to 767

<400>  77

Asn Ser Trp Gly Ser Gln Met Asp Leu Ser Asp Pro Leu Cys Ile Glu 
1               5                   10                  15      


Asp Lys Val Glu Glu Cys Lys Gln Thr Leu Ser Pro Asn Glu Leu Gly 
            20                  25                  30          


Leu Thr Ser Ala Gln Asp Asp Gly Pro Leu Gly Asn Glu Lys Pro Asn 
        35                  40                  45              


Tyr Phe Leu Asn Phe Lys Ala Ile Asn Val Asp Ile Phe Thr Val Ser 
    50                  55                  60                  


His Thr Lys Val Asp Asn Ile Phe Gly Arg Ala Trp Tyr Ser Met Ala 
65                  70                  75                  80  


His Glu Phe Arg Asn Glu Gly Leu Trp Arg Thr Lys Leu Thr Phe Pro 
                85                  90                  95      


Lys Gln Gly His Gly Ala Leu Ser Gln Phe Phe Ala Tyr Tyr Thr Gly 
            100                 105                 110         


Glu Leu Asn Ile His Val Leu Phe Leu Cys Glu Lys Gly Phe Leu Arg 
        115                 120                 125             


Val Ala His Thr Tyr Asp Ser Asp Glu Gly Arg Asp Asp Phe Leu Ser 
    130                 135                 140                 


Ser Asn Gly Val Ile Thr Ile Pro Ala Gly Glu Gln Met Ser Leu Ser 
145                 150                 155                 160 


Ala Pro Phe Tyr Ser His Arg Pro Leu Arg Thr Ile Arg Asn Glu Asp 
                165                 170                 175     


Ala Leu Gly Tyr Leu Leu Cys Gln Pro Met Leu Thr Gly Thr Ser Ser 
            180                 185                 190         


Gly Lys Ile Glu Val Tyr Leu Ser Leu Arg Cys Pro Asn Leu Phe Phe 
        195                 200                 205             


Pro Ile Pro Ala Pro Lys Pro Ala Asn Ala Leu Arg Ser Leu Asn Pro 
    210                 215                 220                 


Phe Ser Asp Glu 
225             


<210>  78
<211>  234
<212>  PRT
<213>  human parechovirus type 6


<220>
<221>  misc_feature
<223>  VP1 sequence from position 542 to 775

<400>  78

Asn Ser Trp Gly Ser Gln Met Asp Leu Ser Asp Pro Leu Cys Ile Glu 
1               5                   10                  15      


Asp Asp Ala Glu Asn Cys Lys Gln Thr Ile Ser Pro Asn Glu Leu Gly 
            20                  25                  30          


Leu Thr Ser Ala Gln Asp Asp Gly Pro Leu Gly Gly Glu Lys Pro Asn 
        35                  40                  45              


Tyr Phe Leu Asn Phe Arg Thr Met Asn Val Asp Ile Phe Thr Val Ser 
    50                  55                  60                  


His Thr Lys Val Asp Asn Ile Phe Gly Arg Ala Trp Phe Val Thr Ser 
65                  70                  75                  80  


His Asp Phe Asn Asn Glu Gly Gln Trp Pro Leu Asp Leu Thr Phe Pro 
                85                  90                  95      


Phe Glu Gly His Gly Ser Leu Ser Leu Leu Phe Ala Tyr Phe Thr Gly 
            100                 105                 110         


Glu Leu Asn Ile His Val Leu Phe Leu Ser Asp Lys Gly Phe Leu Arg 
        115                 120                 125             


Val Val His Thr Tyr Asp Asn Thr Asn Asn Arg Leu Ile Asn Leu Ala 
    130                 135                 140                 


Ser Asn Gly Val Ile Thr Ile Pro Ala Gly Lys Gln Met Ser Leu Ser 
145                 150                 155                 160 


Ala Pro Phe Tyr Ser His Lys Pro Leu Arg Thr Val Arg Asp Thr His 
                165                 170                 175     


Ser Leu Gly Arg Leu Ile Cys Lys Pro Phe Leu Thr Gly Thr Thr Ser 
            180                 185                 190         


Gly Arg Ile Glu Val Tyr Met Ser Leu Arg Cys Pro Asn Phe Phe Phe 
        195                 200                 205             


Pro Val Pro Ala Pro Lys Thr Thr Pro Arg Ser Glu Ser Arg Ala Leu 
    210                 215                 220                 


Arg Gly Asp Met Ala Asn Leu Thr Asn Gln 
225                 230                 


<210>  79
<211>  231
<212>  PRT
<213>  human parechovirus type 1


<220>
<221>  misc_feature
<223>  VP1 sequence from position 542 to 772

<400>  79

Asn Ser Trp Gly Ser Gln Met Asp Leu Thr Asp Pro Leu Cys Leu Glu 
1               5                   10                  15      


Glu Ser Ala Glu Glu Cys Lys Gln Thr Ile Ser Pro Asn Glu Leu Gly 
            20                  25                  30          


Leu Thr Ser Ala Gln Asp Asp Gly Pro Leu Gly Asp Asn Lys Pro Asn 
        35                  40                  45              


Tyr Phe Leu Asn Phe Lys Ser Met Asn Val Asp Ile Phe Thr Val Ser 
    50                  55                  60                  


His Thr Lys Val Asp Asn Ile Phe Gly Arg Ala Trp Phe Tyr Gln Glu 
65                  70                  75                  80  


His Thr Phe Thr Asp Glu Gly Gln Trp Arg Val Asn Leu Glu Phe Pro 
                85                  90                  95      


Lys Gln Gly His Gly Ser Leu Ser Leu Leu Phe Ala Tyr Phe Thr Gly 
            100                 105                 110         


Glu Leu Asn Ile His Val Leu Phe Leu Ala Glu Lys Gly Phe Leu Arg 
        115                 120                 125             


Val Ala His Thr Tyr Asp Thr Ser Ala Asn Arg Val Asn Phe Leu Ser 
    130                 135                 140                 


Ser Asn Gly Val Ile Thr Ile Pro Ala Gly Glu Gln Met Thr Leu Ser 
145                 150                 155                 160 


Ala Pro Tyr Tyr Ser Asn Lys Pro Leu Arg Thr Val Arg Asp Asp Asn 
                165                 170                 175     


Ser Leu Gly Tyr Leu Met Cys Lys Pro Phe Leu Thr Gly Thr Thr Thr 
            180                 185                 190         


Gly Lys Ile Glu Val Tyr Leu Ser Leu Arg Cys Pro Asn Phe Phe Phe 
        195                 200                 205             


Pro Leu Pro Ala Pro Lys Val Ser Thr Ser Arg Ala Leu Arg Gly Asp 
    210                 215                 220                 


Leu Ala Asn Phe Ser Asp Gln 
225                 230     


<210>  80
<211>  233
<212>  PRT
<213>  human parechovirus type 2


<220>
<221>  misc_feature
<223>  VP1 sequence from position 543 to 775

<400>  80

Asn Ser Trp Gly Ser Gln Met Asp Leu Thr Asp Pro Leu Cys Ile Glu 
1               5                   10                  15      


Asp Ser Val Glu Asp Cys Lys Gln Thr Ile Thr Pro Thr Glu Leu Gly 
            20                  25                  30          


Leu Thr Ser Ala Gln Asp Asp Gly Pro Leu Gly Asn Asp Lys Pro Asn 
        35                  40                  45              


Tyr Phe Leu Asn Phe Lys Ser Met Asn Val Asp Ile Phe Thr Val Ser 
    50                  55                  60                  


His Thr Lys Val Asp Asn Ile Phe Gly Arg Ala Trp Phe Ala His Val 
65                  70                  75                  80  


His Asp Phe Thr Asn Asp Gly Leu Trp Arg Gln Gly Leu Glu Phe Pro 
                85                  90                  95      


Lys Glu Gly His Gly Ala Leu Ser Leu Leu Phe Ala Tyr Phe Thr Gly 
            100                 105                 110         


Glu Leu Asn Ile His Val Leu Phe Leu Ser Asp Arg Gly Phe Leu Arg 
        115                 120                 125             


Val Gly His Thr Tyr Asp Thr Glu Thr Asn Arg Thr Asn Phe Leu Ser 
    130                 135                 140                 


Ser Ser Gly Ile Ile Thr Val Pro Ala Gly Glu Gln Met Thr Leu Ser 
145                 150                 155                 160 


Val Pro Ser Tyr Ser Asn Lys Pro Leu Arg Thr Val Arg Ser Ser Asn 
                165                 170                 175     


Ala Leu Gly Tyr Leu Leu Cys Lys Pro Leu Leu Thr Gly Thr Ser Ser 
            180                 185                 190         


Gly Arg Ile Glu Ile Phe Leu Ser Leu Arg Cys Pro Asn Phe Phe Phe 
        195                 200                 205             


Pro Leu Pro Ala Pro Lys Pro Ala Thr Arg Lys Tyr Arg Gly Asp Leu 
    210                 215                 220                 


Ala Thr Trp Ser Asp Gln Ser Pro Tyr 
225                 230             


<210>  81
<211>  232
<212>  PRT
<213>  human parechovirus type 4


<220>
<221>  misc_feature
<223>  VP1 sequence from position 545 to 776

<400>  81

Asn Ser Trp Gly Ser Gln Met Asp Leu Thr Asp Pro Leu Cys Ile Glu 
1               5                   10                  15      


Asp Asp Cys Thr Glu Asp Cys Lys Gln Thr Ile Ser Pro Asp Glu Leu 
            20                  25                  30          


Gly Leu Thr Ser Ala Gln Asp Asp Gly Pro Leu Gly Gly Glu Lys Pro 
        35                  40                  45              


Asn Tyr Phe Leu Asn Phe Arg Ala Val Asn Val Asp Ile Phe Thr Val 
    50                  55                  60                  


Ser His Thr Lys Val Asp Asn Ile Phe Gly Arg Ala Trp Phe Ala Tyr 
65                  70                  75                  80  


Asp His Thr Tyr Arg Asp Glu Gly Thr Trp Arg Gln Ala Leu Asp Phe 
                85                  90                  95      


Pro Lys Lys Gly His Gly Ala Leu Thr Gln Leu Phe Ala Tyr Tyr Ser 
            100                 105                 110         


Gly Glu Leu Asn Ile His Val Leu Phe Leu Ser Glu Thr Gly Phe Leu 
        115                 120                 125             


Arg Val Ala His Thr Tyr Asp Ser Asp Thr Asn Arg Ser Asp Phe Phe 
    130                 135                 140                 


Ser Ser Asn Gly Val Ile Thr Val Pro Ala Gly Glu Gln Met Thr Leu 
145                 150                 155                 160 


Ser Val Pro Phe Tyr Ser Ser Lys Pro Leu Arg Thr Ile Arg Asp Ser 
                165                 170                 175     


Ala Ala Leu Gly Tyr Val Met Cys Lys Pro Phe Met Ser Gly Thr Thr 
            180                 185                 190         


Gly Gly Lys Ile Glu Ile Tyr Leu Ser Leu Arg Cys Pro Asn Leu Phe 
        195                 200                 205             


Phe Pro Leu Pro Ala Pro Lys Pro Thr Ser Gly Arg Ser Leu Arg Gly 
    210                 215                 220                 


Asp Met Ala Gln Phe Ser Asp Gln 
225                 230         


<210>  82
<211>  232
<212>  PRT
<213>  human parechovirus type 5


<220>
<221>  misc_feature
<223>  VP1 sequence from position 1 to 232

<400>  82

Asn Ser Trp Gly Ser Gln Met Asp Leu Ser Asp Pro Leu Cys Met Glu 
1               5                   10                  15      


Gly Asp Glu Ala Glu Asp Cys Lys Gln Thr Ile Ser Pro Asp Glu Leu 
            20                  25                  30          


Gly Leu Thr Ser Ala Gln Asp Asp Gly Pro Leu Gly Val Glu Lys Pro 
        35                  40                  45              


Asn Tyr Phe Leu Asn Phe Arg Ala Ile Asn Val Asp Ile Phe Thr Val 
    50                  55                  60                  


Ser His Thr Lys Val Asp Asn Ile Phe Gly Arg Ala Trp Leu Ala Leu 
65                  70                  75                  80  


Glu His Thr Phe Ala Asp Asp Gly Thr Trp Arg Ala Asp Leu Asn Phe 
                85                  90                  95      


Pro Thr Gln Gly His Gly Thr Leu Thr Arg Leu Phe Thr Tyr Tyr Ser 
            100                 105                 110         


Gly Glu Leu Asn Val His Val Leu Tyr Leu Ser Asp Asn Gly Phe Leu 
        115                 120                 125             


Arg Val Thr His Ala Tyr Asp His Asp Asn Asp Arg Ser Asn Phe Leu 
    130                 135                 140                 


Ser Ser Asn Gly Val Ile Thr Val Pro Ala Gly Glu Gln Met Thr Leu 
145                 150                 155                 160 


Ser Val Pro Phe Tyr Ser Ser Lys Pro Leu Arg Thr Ile Arg Glu Ser 
                165                 170                 175     


Gly Ala Leu Gly Lys Leu Ile Cys Lys Pro Leu Leu Ser Gly Thr His 
            180                 185                 190         


Ser Gly Lys Ile Glu Val Tyr Leu Ser Leu Arg Cys Pro Asn Leu Phe 
        195                 200                 205             


Phe Pro Ser Pro Ala Pro Lys Glu Lys Thr Ser Arg Ala Leu Arg Gly 
    210                 215                 220                 


Asp Met Ala Asn Phe Thr Asp Gln 
225                 230         


<210>  83
<211>  206
<212>  DNA
<213>  artificial

<220>
<223>  Contig3177 SPeLV

<400>  83
cttacactag aaaattcaga ggctaaataa gatgccagtg caactccatt aataaggtca       60

ggattacgaa aaaacatgac aagcaccgca acaaagcgga ccagacagca caatatagat      120

tttgaaacat cattacccag caactccata gcagaagaat taagcagccc agtcaaagaa      180

ttcatcatgt catcaactcc ctggga                                           206


<210>  84
<211>  252
<212>  DNA
<213>  artificial

<220>
<223>  Contig13129 SPeLV

<400>  84
ccaccacaca taccgcgtgt cgtttttgca cggtagcgta ttgctgatgt gcatgtatct       60

ccttggttag tggtgacagt gccataatgg tgaaggtcat aaattggcat acatgttagg      120

ccctctcgac ctcgccacaa gatgacacca tctccaaggt ctccatcaga caaatggccc      180

acgatgctag caaaagtaac aggtaaaggc ttgcaggtga taagacaaag gtccatggac      240

tctccattca ag                                                          252


<210>  85
<211>  1172
<212>  DNA
<213>  artificial

<220>
<223>  Contig51104 SPeLV

<400>  85
tgtccagtgt attagtagtg gtgctagcta cttccaagtg cgtaaaaggt gtaactacca       60

cccacccgca gtcagaagaa tcagtgttag caagattgtg ggtattaatg taaggaatgt      120

acaaatctgc ctcagtcata gtcgccacat taaaaatgac atgtggccaa ttaaacattg      180

tatggagtat caaatcctta ttattccaac tctgataatg gtcatttggc acatagacaa      240

cgacaaaaga accggcagaa cctgcagcag cattgacctg aatcttaata tggaacgaac      300

cacgaaagaa ctgaaaatat cgtgatgtgc cataagcagg aaacgaccga ttcttccaaa      360

agcatttggg taatggcaat tgcaacttat catttccgcc ccatacccag gtgttgtcaa      420

aatgcacaat gtcaagcaaa accattttag acggagtttc gcgtgaggtc tctttcgagt      480

acgcacatgc ttcataaggg tcattggcat ccaaaacagg attggcagga gccgtaggag      540

cagcactatg ctggacaata tttgctgcat tagtggtggc tgatcccgaa agaacaccac      600

caaaacctcc gccagattca gcagtatcac caagcaacgt ttgagaaact tccttagtta      660

aagtatcaac aacaacatcc atattatatg aacagcctga gtaccccaaa gtgcaggccc      720

acaccctatc aggcagtatg actaaatttg cagattccca ctgcaaacgc gcacgtggtg      780

ggtataccct ccgtttgttg ggatggcaat gggatatgga atccagtccc gggcgatcct      840

ccacggatac acatgtactc atggtttcca cgtatcacgg tcactctttt ggggcaaatt      900

aatatcacca accctcctac accagactgt cgaggtctgt gtcggcggga aggatcttgt      960

atacaattta aacaaaacaa aacagacaac acacaacata aactagtgaa aataagagaa     1020

agggacttgg ctaagtaacc cagagccact ggtcaaaagc agttgtacag ccgggaaacc     1080

cagctgcaca accacttttg tccagtgtat tagtagtggt gctagctact tccaagtgcg     1140

taaaaggtgt aactaccacc cacccgcagt ca                                   1172


<210>  86
<211>  384
<212>  DNA
<213>  artificial

<220>
<223>  Contig51912 SPeLV

<400>  86
agcatggcta gcctgccaat caaaaataca atattcacta tgtgaagctg tgaacggtag       60

caaaggtaat gctttaattt ttgttacatc acgaaacgtg cggactctca ctctcgtgcc      120

tgcaacacta gggtcaataa aagcacgttc accaaccaaa gctatcgatt gggcggctgt      180

tgtgctaagt acattggcga tgttcattga tccaggccct tcagcaatat caattttgtt      240

gcgtgtgtac ttatatttct tattgcgggc aacacgcttg ggcccctgag aatcactagg      300

taaatcggta tatggccttg ggccttggaa ttgaaaatca accaaagacc cgaaaacagc      360

aatgtccagt gtattagtag tggt                                             384


<210>  87
<211>  442
<212>  DNA
<213>  artificial

<220>
<223>  Contig52512 SPeLV

<400>  87
gctcgtgtga tatcattctg taccccatac gtggtaaaac cctcagtaag gcgattaaga       60

acagataaca accacttatg cttgtctcta aattccctct tacgcaaatt gcaggtggtg      120

gcacaatcct tcaaatgctc attaagagta tacataaaat tggaaatgag catcttattt      180

ttcctacacc attcatgaaa ctttgccgaa gtatctggtt tcaataagtc acgcacgaac      240

gtgtgcaatt tctggaagag ctcaatccac catgtacaat tacgagcact caaggacaaa      300

gcattaaatg cagccaaact ctgtgactca aatgggttca tttcaggagg gtacgatccc      360

aacgtctcct tgattaattg tttatagtca gaatcagaac caatatccat cattgaaagg      420

aattgttcag agagtttata ca                                               442


<210>  88
<211>  860
<212>  DNA
<213>  artificial

<220>
<223>  Contig53438 SPeLV

<400>  88
cattcaagga taactcatcc acagtttcaa tatctaaatc aaacatggac ccattatagt       60

caagcaccca attatcatag cgctcaagag tagcaaggcc atgtgtgtaa aacaaaaaag      120

aattaccacc aaatgcaagg ccatgaagtg taatagaccc agaatggaga aaaacacagt      180

atttagaata atgctggaat tcattataag ggccttggga aacaagcaca cgtcgcccac      240

gcgtgagctt agtaacaggc atcttatggg cggtctgatt atagggacgc tggctgtcca      300

attccttaag catagatata gcaataccta acacactcat agttaaagca ccaaaagcaa      360

tccacttttt gttacgtgta acaaacgaca ccatgctgtc aacacacgaa tcaaaccact      420

taaggacaga ttccgacgct tgctttaaca tgggtacaac accagtgcta gcgcaatagt      480

cgaacactga agcaactgga acagcagggc caagaaggga caccatatca tcacaccaag      540

cctcaaaagt ttcaggagcc tgactaataa aagaattcca gagttgaaaa gattccctac      600

gctgctctaa ctgtttaatt atttcagcag caagatcatt aacagaaaag ggttgccagt      660

cataaccatt ggtagtatac tcccatgctg ctccatcgcg cactgcactc atatgtgcgt      720

tgacatcaag aaggccattc ttggttaaag tcctccgtgc gcgaacggta taaacaatag      780

gaaaccggcg cttcaaagca cctggagcgc acaaggtacg agatgaccaa tctgatttat      840

ttgtcgtggc aataactaac                                                  860


<210>  89
<211>  254
<212>  DNA
<213>  artificial

<220>
<223>  Contig59674 SPeLV

<400>  89
tgtatttcaa agcttgtctg ccaatcacag agtcaacctc acacttcagg cgattgtcaa       60

acgggctcaa caccgctggg tggagctcct gttcgacaaa gccataaagt ggagagggct      120

ttagaacact ctttgaaggt tgatgtacac gcacaccagg ccatggtttg gtgtcggtga      180

ctagtccttg actttcaagc tgcttacaca cactcagact tgctgcaaca ccataaacac      240

catttccagc aaca                                                        254


<210>  90
<211>  1518
<212>  DNA
<213>  artificial

<220>
<223>  Contig77653 SPeLV

<400>  90
aaacttcttt ataaatgatg agagagccat ttccactcac caaaaactgc tctgggctac       60

catggaaagt caagtatcct ttaggcacag ggacacagaa tttcttatta ccatcataca      120

tcaagacagg gccaggattt tgttccacat ctccacattg taatatcatg ttttgtaatt      180

cttctttact gcctagccaa ttaataaaat ccctttgaaa actaggaata tccccataat      240

gggggataaa aaactgctca taaggctcat gcaccaattt gaactttagc tcctctgcct      300

cctcagctga tgtcagcttt gatggataca cagccatctt agctgcagtt gtctgtatag      360

gaaatggctt gactaagaag aagcatggag ttctaagtga tgcataaaca atgacctgtc      420

cttttggagc ctcaggcact aacttcaaaa tgccaaacgt gcgcttaact gcactatttt      480

ggtgagcaag cacagtccgc aatggcgacc aggaatagaa aggggctgca aatgatatca      540

tctcacgagg cggcacaatt atcaacccta gaccttcagc gggaccaaca gtgctagcct      600

catgcgaata actatgagtg acagccattg ggtcatcact attgttgaca acatggaagt      660

taacctcccc agcccagaaa gaaaagaaat tcattgcagc gcctggcata gacgatggag      720

catccacatc aatataaaaa ggggcacggc tctcgccctc atagttatgt ttcatgacat      780

accatccacg accaaagaaa taatcaaggt gcatatgatc tttggcaaat attgaagtag      840

tcagcttatg gatattgata aacttaggtg ctgcacaatt aagttggtta tcagttgtgc      900

catcattctc cacacttgtt aatccagcca tctgcgcaca ctggggccct ttaccactac      960

tcccatcttt agattccaat gtaagacaat caggatgtcc tggttccatg tcatccaaag     1020

gatcagcttc atccatatcc gatccccaac catggaactt gacagtgtca ccgcatggcg     1080

ccaagaactc aaaatcctcg ccgccacgca caaaaagtgc gcattttata acgttggaag     1140

atgcattatt gtgagccaat cgggtttcaa catacacgtt gaccaggaca actacagaat     1200

tatcacattc cctaatccaa ttgtaatgag taaatggcaa agtaatatca aatgaggatt     1260

gttcaccaat gtcacagaca gtaaatatca acgcattggc atcatcctga ctaaaactgt     1320

gggttccatt tggaaacaag acaattctaa gcctgccacg gtgaaaactg ctagcaaaaa     1380

tggtgagagt gaaaataata gaaccacgcc aaaactgata ggctgttgac aatggaccca     1440

aattaccaag ctctcgtatc ttatagccac gcccaaaaat cggagacttg gttgttggag     1500

catggctagc ctgccaat                                                   1518


<210>  91
<211>  155
<212>  DNA
<213>  artificial

<220>
<223>  Contig67601 SPeLV

<400>  91
gtttttagtg tcaaaagagt cttttgcaag ctgttccggc aactttatga ttctgaccct       60

attgagactg gatttgctgt tggtatcaac tgtattgctg actggaagaa tttgttggac      120

ggcgagcaac cttctccaag tgccaccaaa gataa                                 155


