                         SEQUENCE LISTING

<110>  Battelle Memorial Institute
 
<120>  PEPTIDE AND PROTEIN BIOMARKERS FOR TYPE 1 DIABETES MELLITUS

<130>  23-87774-03

<150>  US 61/524,173
<151>  2011-08-16

<160>  54    

<170>  PatentIn version 3.5

<210>  1
<211>  16
<212>  PRT
<213>  Homo sapiens

<400>  1

Glu Ile Pro Ala Trp Val Pro Phe Asp Pro Ala Ala Gln Ile Thr Lys 
1               5                   10                  15      


<210>  2
<211>  13
<212>  PRT
<213>  Homo sapiens

<400>  2

Leu Ser Ser Gly Leu Val Thr Ala Ala Leu Tyr Gly Arg 
1               5                   10              


<210>  3
<211>  10
<212>  PRT
<213>  Homo sapiens

<400>  3

Ser His Leu Ile Ile Ala Gln Val Ala Lys 
1               5                   10  


<210>  4
<211>  12
<212>  PRT
<213>  Homo sapiens

<400>  4

Leu Phe Gly Glu Val Thr Ser Pro Leu Phe Pro Lys 
1               5                   10          


<210>  5
<211>  8
<212>  PRT
<213>  Homo sapiens

<400>  5

Val Ser Val His Pro Asp Tyr Arg 
1               5               


<210>  6
<211>  11
<212>  PRT
<213>  Homo sapiens

<400>  6

Gly Glu Ser Gly Gly Ala Val Phe Leu Glu Arg 
1               5                   10      


<210>  7
<211>  10
<212>  PRT
<213>  Homo sapiens

<400>  7

His Ala Ile Ile Leu Leu Thr Asp Gly Lys 
1               5                   10  


<210>  8
<211>  12
<212>  PRT
<213>  Homo sapiens

<400>  8

Ser Ser Gly Gln Trp Gln Thr Pro Gly Ala Thr Arg 
1               5                   10          


<210>  9
<211>  10
<212>  PRT
<213>  Homo sapiens

<400>  9

Asp Phe Asp Phe Val Pro Pro Val Val Arg 
1               5                   10  


<210>  10
<211>  9
<212>  PRT
<213>  Homo sapiens

<400>  10

Thr Gly Leu Gln Glu Val Glu Val Lys 
1               5                   


<210>  11
<211>  9
<212>  PRT
<213>  Homo sapiens

<400>  11

Ile Thr Gln Val Leu His Phe Thr Lys 
1               5                   


<210>  12
<211>  16
<212>  PRT
<213>  Homo sapiens

<400>  12

Ala Leu Asn His Leu Pro Leu Glu Tyr Asn Ser Ala Leu Tyr Ser Arg 
1               5                   10                  15      


<210>  13
<211>  13
<212>  PRT
<213>  Homo sapiens

<400>  13

Ser Ile Ser Cys Gln Glu Ile Pro Gly Gln Gln Ser Arg 
1               5                   10              


<210>  14
<211>  11
<212>  PRT
<213>  Homo sapiens

<400>  14

Glu Leu Asp Glu Ser Leu Gln Val Ala Glu Arg 
1               5                   10      


<210>  15
<211>  17
<212>  PRT
<213>  Homo sapiens

<400>  15

Leu Phe Asp Ser Asp Pro Ile Thr Val Thr Val Pro Val Glu Val Ser 
1               5                   10                  15      


Arg 
    


<210>  16
<211>  10
<212>  PRT
<213>  Homo sapiens

<400>  16

Thr Leu Leu Ser Asn Leu Glu Glu Ala Lys 
1               5                   10  


<210>  17
<211>  11
<212>  PRT
<213>  Homo sapiens

<400>  17

Ala Leu Glu Gln Asp Leu Pro Val Asn Ile Lys 
1               5                   10      


<210>  18
<211>  15
<212>  PRT
<213>  Homo sapiens

<400>  18

Glu Trp Val Ala Ile Glu Ser Asp Ser Val Gln Pro Val Pro Arg 
1               5                   10                  15  


<210>  19
<211>  10
<212>  PRT
<213>  Homo sapiens

<400>  19

Glu Leu Leu Glu Ser Tyr Ile Asp Gly Arg 
1               5                   10  


<210>  20
<211>  12
<212>  PRT
<213>  Homo sapiens

<400>  20

Glu Thr Ala Ala Ser Leu Leu Gln Ala Gly Tyr Lys 
1               5                   10          


<210>  21
<211>  14
<212>  PRT
<213>  Homo sapiens

<400>  21

Gln Glu Pro Gly Glu Asn Ser Glu Ile Leu Pro Thr Leu Lys 
1               5                   10                  


<210>  22
<211>  17
<212>  PRT
<213>  Homo sapiens

<400>  22

Tyr Val Arg Pro Gly Gly Gly Phe Val Pro Asn Phe Gln Leu Phe Glu 
1               5                   10                  15      


Lys 
    


<210>  23
<211>  13
<212>  PRT
<213>  Homo sapiens

<400>  23

Ala Gly Ala Leu Asn Ser Asn Asp Ala Phe Val Leu Lys 
1               5                   10              


<210>  24
<211>  17
<212>  PRT
<213>  Homo sapiens

<400>  24

Gln Thr Gln Val Ser Val Leu Pro Glu Gly Gly Glu Thr Pro Leu Phe 
1               5                   10                  15      


Lys 
    


<210>  25
<211>  8
<212>  PRT
<213>  Homo sapiens

<400>  25

Thr Gly Ala Gln Glu Leu Leu Arg 
1               5               


<210>  26
<211>  11
<212>  PRT
<213>  Homo sapiens

<400>  26

Glu Ala Leu Val Pro Leu Val Ala Asp His Lys 
1               5                   10      


<210>  27
<211>  11
<212>  PRT
<213>  Homo sapiens

<400>  27

Val Ala Asn Tyr Val Asp Trp Ile Asn Asp Arg 
1               5                   10      


<210>  28
<211>  9
<212>  PRT
<213>  Homo sapiens

<400>  28

Asp Ser Val Thr Gly Thr Leu Pro Lys 
1               5                   


<210>  29
<211>  9
<212>  PRT
<213>  Homo sapiens

<400>  29

Glu Ile Ile Ile His Gln Asn Tyr Lys 
1               5                   


<210>  30
<211>  14
<212>  PRT
<213>  Homo sapiens

<400>  30

Ile Ala Tyr Gly Thr Gln Gly Ser Ser Gly Tyr Ser Leu Arg 
1               5                   10                  


<210>  31
<211>  13
<212>  PRT
<213>  Homo sapiens

<400>  31

Ile Tyr Ser Gly Ile Leu Asn Leu Ser Asp Ile Thr Lys 
1               5                   10              


<210>  32
<211>  19
<212>  PRT
<213>  Homo sapiens

<400>  32

Asp Ile Pro Thr Asn Ser Pro Glu Leu Glu Glu Thr Leu Thr His Thr 
1               5                   10                  15      


Ile Thr Lys 
            


<210>  33
<211>  11
<212>  PRT
<213>  Homo sapiens

<400>  33

Thr Val Gly Ser Asp Thr Phe Tyr Ser Phe Lys 
1               5                   10      


<210>  34
<211>  8
<212>  PRT
<213>  Homo sapiens

<400>  34

Phe Asn Ala Leu Gln Tyr Leu Arg 
1               5               


<210>  35
<211>  10
<212>  PRT
<213>  Homo sapiens

<400>  35

Ile Ser Asn Ile Pro Asp Glu Tyr Phe Lys 
1               5                   10  


<210>  36
<211>  10
<212>  PRT
<213>  Homo sapiens

<400>  36

Asn Asn Gln Ile Asp His Ile Asp Glu Lys 
1               5                   10  


<210>  37
<211>  14
<212>  PRT
<213>  Homo sapiens

<400>  37

Ala Gly Leu Leu Arg Pro Asp Tyr Ala Leu Leu Gly His Arg 
1               5                   10                  


<210>  38
<211>  17
<212>  PRT
<213>  Homo sapiens

<400>  38

Pro Ser Leu Ser His Leu Leu Ser Gln Tyr Tyr Gly Ala Gly Val Ala 
1               5                   10                  15      


Arg 
    


<210>  39
<211>  8
<212>  PRT
<213>  Homo sapiens

<400>  39

Thr Phe Thr Leu Leu Asp Pro Lys 
1               5               


<210>  40
<211>  13
<212>  PRT
<213>  Homo sapiens

<400>  40

Glu Glu Ser Leu Asp Ser Asp Leu Tyr Ala Glu Leu Arg 
1               5                   10              


<210>  41
<211>  10
<212>  PRT
<213>  Homo sapiens

<400>  41

Asn Ile Gln Ser Leu Glu Val Ile Gly Lys 
1               5                   10  


<210>  42
<211>  14
<212>  PRT
<213>  Homo sapiens

<400>  42

Ala Gln Leu Leu Gln Gly Leu Gly Phe Asn Leu Thr Glu Arg 
1               5                   10                  


<210>  43
<211>  13
<212>  PRT
<213>  Homo sapiens

<400>  43

Glu Glu Asn Phe Tyr Val Asp Glu Thr Thr Val Val Lys 
1               5                   10              


<210>  44
<211>  9
<212>  PRT
<213>  Homo sapiens

<400>  44

Ser Val Asn Asp Leu Tyr Ile Gln Lys 
1               5                   


<210>  45
<211>  9
<212>  PRT
<213>  Homo sapiens

<400>  45

Thr Leu Glu Ala Gln Leu Thr Pro Arg 
1               5                   


<210>  46
<211>  13
<212>  PRT
<213>  Homo sapiens

<400>  46

Leu Gly Asn Gln Glu Pro Gly Gly Gln Thr Ala Leu Lys 
1               5                   10              


<210>  47
<211>  10
<212>  PRT
<213>  Homo sapiens

<400>  47

Phe Gln Pro Thr Leu Leu Thr Leu Pro Arg 
1               5                   10  


<210>  48
<211>  10
<212>  PRT
<213>  Homo sapiens

<400>  48

Leu Leu Asp Ser Leu Pro Ser Asp Thr Arg 
1               5                   10  


<210>  49
<211>  12
<212>  PRT
<213>  Homo sapiens

<400>  49

Leu Val Leu Leu Asn Ala Ile Tyr Leu Ser Ala Lys 
1               5                   10          


<210>  50
<211>  11
<212>  PRT
<213>  Homo sapiens

<400>  50

Thr Asn Leu Glu Ser Ile Leu Ser Tyr Pro Lys 
1               5                   10      


<210>  51
<211>  13
<212>  PRT
<213>  Homo sapiens

<400>  51

Ala Ala Asp Asp Thr Trp Glu Pro Phe Ala Ser Gly Lys 
1               5                   10              


<210>  52
<211>  13
<212>  PRT
<213>  Homo sapiens

<400>  52

Gly Ser Pro Ala Ile Asn Val Ala Val His Val Phe Arg 
1               5                   10              


<210>  53
<211>  15
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  start amino acid sequence of the PPBP precursor


<220>
<221>  MISC_FEATURE
<222>  (2)..(9)
<223>  X is any amion acid.

<400>  53

Ser Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Asn Leu Ala Lys Gly Lys 
1               5                   10                  15  


<210>  54
<211>  8
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  end amino acid sequence of the PPBP precursor

<400>  54

Leu Ala Gly Asp Glu Ser Ala Asp 
1               5               


