                               SEQUENCE LISTING

<110> ALERE SAN DIEGO, INC.
 
<120> MONITORING RECOMBINASE POLYMERASE AMPLIFICATION MIXTURES

<130> 30170-0027WO1

<140> PCT/US2012/032508
<141> 2012-04-06

<150> 61/472,919
<151> 2011-04-07

<160> 23    

<170> PatentIn version 3.5

<210> 1
<211> 34
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      Spy1258F2 primer

<400> 1
cacagacact cgacaagtcc tcaatcaaac cttg                                   34


<210> 2
<211> 34
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      Spy1258R2 primer

<400> 2
cagaaatcct tgatgagttg cggaaatttg aggt                                   34


<210> 3
<211> 32
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      Spy1258exoP1 primer


<220>
<221> modified_base
<222> (31)..(31)
<223> BHQ-1-dT 

<400> 3
ccttgtccta ccttatagaa catagagaat tt                                     32


<210> 4
<211> 44
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      HIV p2LFtexas primer


<220>
<223> 5' Texas Red 

<220>
<221> modified_base
<222> (31)..(31)
<223> dSpacer 

<220>
<223> 3' dA blocked 

<400> 4
agaattacaa aaacaaatta caaaaattca naattttcgg gttt                        44


<210> 5
<211> 34
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      Spy1258F2 primer

<400> 5
cacagacact cgacaagtcc tcaatcaaac cttg                                   34


<210> 6
<211> 34
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      Spy1258R2 primer

<400> 6
cagaaatcct tgatgagttg cggaaatttg aggt                                   34


<210> 7
<211> 35
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      SpaF3 primer

<400> 7
cgctttgttg atctttgttg aagttatttt gttgc                                  35


<210> 8
<211> 35
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      SpaR10+1 primer

<400> 8
ttaaagatga tccaagccaa agtcctaacg tttta                                  35


<210> 9
<211> 45
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      SpaProbe1


<220>
<221> modified_base
<222> (28)..(28)
<223> TMR dT 

<220>
<221> modified_base
<222> (30)..(30)
<223> dSpacer 

<220>
<221> modified_base
<222> (32)..(32)
<223> BHQ-2 dT 

<220>
<223> 3' biotin 

<400> 9
catcagcttt tggagcttga gagtcattan gtttttgagc ttcac                       45


<210> 10
<211> 30
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      MecF9-8+2 primer

<400> 10
ccctcaaaca ggtgaattat tagcacttgt                                        30


<210> 11
<211> 30
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      MecR1a primer

<400> 11
cttgttgagc agaggttctt ttttatcttc                                        30


<210> 12
<211> 29
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      MecProbe1


<220>
<221> modified_base
<222> (28)..(28)
<223> FAM-dT 

<220>
<223> 3' biotinTEG

<400> 12
atgacgtcta tccatttatg tatggcatg                                         29


<210> 13
<211> 33
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      FluAPAFNA507 primer

<400> 13
aacctgggac ctttgatctt ggggggctat atg                                    33


<210> 14
<211> 33
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      FluAPARNA106 primer

<400> 14
atgtgttagg aaggagttga accaagaagc att                                    33


<210> 15
<211> 34
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      FluAPAexoP2.2 probe


<220>
<221> modified_base
<222> (34)..(34)
<223> FAM-dT 

<400> 15
gatcttgggg ggctatatga agcaatygag gagt                                   34


<210> 16
<211> 30
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      FluBNSF1007 primer

<400> 16
catcggatcc tcaactcact cttcgagcgt                                        30


<210> 17
<211> 34
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      FluBNSR705 primer

<400> 17
gaccaaattg ggataagact cccaccgcag tttc                                   34


<210> 18
<211> 30
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      FluBNSexoP1 probe


<220>
<221> modified_base
<222> (30)..(30)
<223> FAM-dT 

<400> 18
catcggatcc tcaaytcact cttcgagcgt                                        30


<210> 19
<211> 35
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      M2intFAM probe


<220>
<221> modified_base
<222> (18)..(18)
<223> carboxyfluorescein-dT 

<400> 19
tcctcatatc cattctgtcg aatatcatca aaagc                                  35


<210> 20
<211> 16
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      Spy1258exoP1 primer


<220>
<221> modified_base
<222> (1)..(1)
<223> FAM-dT 

<220>
<223> 3' block c3 spacer 

<400> 20
taaccgcact cgctac                                                       16


<210> 21
<211> 15
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      MecProbe1


<220>
<221> modified_base
<222> (2)..(2)
<223> BHQ-1 dT 

<220>
<223> 3' biotinTEG 

<400> 21
gtaacgaaga atata                                                        15


<210> 22
<211> 13
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      FluAPAexoP2.2 probe

<220>
<221> modified_base
<222> (2)..(2)
<223> BHQ-1-dT 

<220>
<223> 3' block c3spacer 

<400> 22
cttgattaat gat                                                          13


<210> 23
<211> 16
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      FluBNSexoP1 probe


<220>
<221> modified_base
<222> (2)..(2)
<223> BHQ-1-dT 

<220>
<223> 3' block c3spacer 

<400> 23
ttaatgaagg acattc                                                       16



