                               SEQUENCE LISTING	

<110> BOEHRINGER INGELHEIM VETMEDICA, INC. 

<120> EQUINE RHINITIS VACCINE

<130> 10-0144-PCT

<140> 
<141>

<150> 62/510,226
<151> 2011-07-21

<150> 61/452,390
<151> 2011-03-14

<160> 14    

<170> PatentIn version 3.5

<210> 1
<211> 353
<212> DNA
<213> Equine rhinitis A virus

<400> 1
atgcctgtag cgtcagtaaa acgcggtaaa cataggcttt gactgtagcg tcagtaaaac       60

gcaacaacca tacgctgttg tgcctgtagc gtcagtaaaa cgcggcaaac gcaagcatta      120

actgtagcgt cagtaaaacg caacaaccat acgctaatgt gcctgaggcg tcagtaaacg      180

catacagcaa accagagctt cccggcttta agggttactg ctcgtaatga gagcacttgg      240

caatttgtca ggatttcctg gtggttgtca cgggagagag gagcccgttt tcgggcactg      300

ttcccaacaa acatttgtgc gcttcggcgc acaccccgct cagccccctg tca             353


<210> 2
<211> 7839
<212> DNA
<213> Equine rhinitis A virus

<400> 2
ttcttttttt ttcccttccc tcgatcaccg acgttggggg ggggggggtt gaaaaagttt       60

atgcctgtag cgtcagtaaa acgcggtaaa cataggcttt gactgtagcg tcagtaaaac      120

gcaacaacca tacgctgttg tgcctgtagc gtcagtaaaa cgcggcaaac gcaagcatta      180

actgtagcgt cagtaaaacg caacaaccat acgctaatgt gcctgaggcg tcagtaaacg      240

catacagcaa accagagctt cccggcttta agggttactg ctcgtaatga gagcacttgg      300

caatttgtca ggatttcctg gtggttgtca cgggagagag gagcccgttt tcgggcactg      360

ttcccaacaa acatttgtgc gcttcggcgc acaccccgct cagccccctg tcattgactg      420

gtcgaaggcg ctcgcaataa gactggtcgt cacttggctt ttctatccgt tcaggcttta      480

gcgcgccctc gcgcggcggg ttgtcaggcc cgtgtgctgt acagcaccag gtaaccggac      540

agcagcttgc tggattttcc cggtgccatt gctctggatg gtgtcaccaa gctggtggat      600

gaagagtgaa cctgatgaag caacacactt gtggtagcgc tgcccaaaag ggagcggaat      660

tcccccgccg cgaggcggtc ctctctggcc aaaagcccag cgttaatagc gccttttggg      720

atgcaggtac cccacctgcc aagtgtgaag tggaatcagc ggatctctga ttcggcctgt      780

actgaactac accatctacc gctgtgaaga atgtcctgaa ggcaagctgg ttacagccct      840

gatcaggagc cccatccatg actctcgatt ggcatggggt caaaaattgt ctaagcagcg      900

gcagggacgc gggagcgttt cctttccatt ttgatttgca tgatggcggc gtctaaagtg      960

tacagggttt gcgagcagac tcttctcgct ggcgccgtgc gcatgatgga caagtttttg     1020

cagaagagag ttgtttttgt gccacaccta gataaacagg tacgcctgac aggtcttcac     1080

aactatgaca acacatgttg gcttaatgcc ttgactcagt tgactcagat tcttggaatt     1140

cggctttttg atgaacactt tggaaacaga ggtttgttca ctcggaaaac aattgattgg     1200

gtgagtgacc aaactggaat aaaggattta aaatcaggag cgccacccct cgtggtggtt     1260

tacaagctct ggcaacacgg ccatttggat gtcggcacca tggaaaagcc cagaccaatc     1320

acgctttggt ctgggcccaa agtgtgtctg tctgacatgt gggcgtgtgt ttctgccaag     1380

cctggacacg cagtgttcta tctcttgact gatgaaggat ggatttgcat tgatgacaag     1440

aaaatttatt atgaaacacc agagcccgac gatgtcttgg tcttcgcacc ctatgatttt     1500

gagtcactcg gaaaagatcc tcctaggctg caccaaagat acgaaaaggc tttcaaaaag     1560

ttgtcaggag ctgggacctc tactccgaca accgggaatc agaatatgtc gggcaatagt     1620

gggtccattg tccaaaattt ttacatgcaa caataccaaa attcaattga tgcagacctg     1680

ggcgataatg tcatcagtcc tgaaggccaa ggcagcaaca ctagtagctc tacctcctca     1740

agccagtcgt ctggtttagg tggatggttc tctagtctgc tcaacctagg taccaagcta     1800

ctggctgaca aaaagacaga agaaaccaca aacattgagg acaggattga gacaacagtt     1860

gtgggagtga cgattatcaa ttcacaaggg tcagttggca caacctattg ttactccaag     1920

cctgacagca aagcgccctc cacagtgtct gacccggtca cccggctggg gccaactctt     1980

tctagacact acaccttcaa ggttggagag tggccacact cacaatccca tgggcacgcc     2040

tggatttgcc cactgcccgg ggacaaactt aaaaagatgg gcagtttcca cgaggtggtg     2100

aaggcacacc acttggtgaa gaatggatgg gatgtggttg ttcaggtgaa tgcctctttt     2160

gcccactcgg gagctctttg cgttgcagca gttcctgagt atgaacacac ccatgagaag     2220

gctctaaaat ggtctgagct tgaagaacct gcttatacat atcagcagct ttcagtgttt     2280

ccacatcaat tgttaaattt gagaacaaat tcttctgtac acttggttat gccctatatt     2340

ggacctgggc caaccacgaa tttgacactt cataacccct ggaccattgt aatcttgatt     2400

ttgtctgaac tgacagggcc tggccagact gtgcccgtca ccatgtcggt ggctcctatt     2460

gacgccatgg tgaatgggcc tctcccaaac ccagaggcac caattagagt ggtttcagta     2520

cctgagtcag attcgttcat gtcttctgtg ccagacaatt ctaccccgct ttatccaaag     2580

gttgtggtcc cccctcggca agtcccaggg aggttcacga attttattga tgtggctaaa     2640

cagacttact cattttgctc catctctggc aagccctatt ttgaggtgac aaatacttca     2700

ggagacgagc ctctgtttca gatggatgtc tccctcagtg ctgctgagtt gcacgggaca     2760

tatgttgcaa gcttgtcatc tttctttgca cagtacaggg gttcactaaa cttcaatttc     2820

atcttcactg gagctgcggc aaccaaagct aaattcttgg tcgccttcgt tcctccccac     2880

acagccgcgc ctaaaacgcg ggatgaagcc atggcgtgta tacacgcagt gtgggatgtc     2940

ggcttgaatt ctgccttttc tttcaatgtg ccttattcat ctccagctga ctttatggcc     3000

gtttactcgg cagaggcaac ggttgtgaat gtgtctggct ggctacaagt ttatgccttg     3060

actgctctca cttcaactga cattgctgtg aatagcaagg gccgtgtttt ggtggccgtt     3120

tctgctgggc cagatttctc acttcgacac cccgtggatc tgcctgacaa gcaggtcaca     3180

aatgtgggcg aggacgggga accaggtgaa actgagcccc gttatgctct gtctccagtg     3240

gacatgcatg ttcatacgga tgtcagcttc ctgctagaca gattttttga tgttgaaaca     3300

attgagcttt caaatttgac tgggtcacca accactcata ttttgaaccc atttggctcc     3360

accgctcagt tggcatgggc taggctgttg aacacctgca catatttctt ttcaaatttg     3420

gagttgtcta tacaattcaa atttacaaca atgccctctt ccgttgaaaa aggcttcgtc     3480

tgggttaagt ggttcccggt tggagcacca acaaaaacaa cagatgcatg gcagcttgaa     3540

ggcggaggca actccgtcag aattcaaaaa ctggctgtgg ctggcctctc acccaccgtt     3600

atttttaaaa ttgctggctc gcggtcgcag gcatgtggct tcaatgtgcc ctacacttca     3660

atgtggcggg ttgtgccagt cttttacaac ggttggggcg cgcccacaaa agagaaagca     3720

acctacaatt ggcttccggg cgcacatttt gggtcgatac ttttgacttc tgatgcacac     3780

gacaagggtg gctgttacct gcggtatcga ttcccgcggg ctagcatgta ctgcccaaga     3840

cctattccgc ccgcattcac ccggccggcg gataagacta ggcacaaatt ccctacaaac     3900

attaacaaac agtgcactaa ttatgccctt cttaaattgg caggtgatgt agagagtaat     3960

cctggcccca ctattttttc taaagcttct gctgatttga acgccctgtc cacctctctt     4020

ggtgagttga ctggtatgct taaggatttg aaagctaagg ctgaaactta ttcccccttt     4080

tataaaatgg caaaaatgtt gtttaaattg gccactctag cggttgccgc tatgagaaca     4140

aaagacccag ttgtagtggt gatgttgata gctgattttg gattggaagt ttttgatacg     4200

ggtttcttct tctcgtattt tcaagagaaa ctgcagcctt atatgaagac cattcccggc     4260

aaagtttctg atttggttac agacgcagct actgctgcag ctcaaattcc aaaaggggtg     4320

tattcttttg tgtcatcttt ctttgagaca ccagaaggtg tggttgagaa acaggtttct     4380

cttaggacta tcaatgatat ttttactctc ttgaaaaatt cggactggtt tattaagacg     4440

ctggttgctc tcaaaaagtg gctggtgtcg tggttcaaac aggaacagca agcagatgat     4500

gccctttatt ctgaattgga aaaataccct ttgtataaat tgaaattgaa ggaaccagac     4560

actcaggagg aggcccgcca gtggttcaaa gacatgcagc agagagcctt ggcagtgaag     4620

gataagggtt tattctctct gttgcaaatc cctcttgtga acttgcctac atcacgtcct     4680

gaacccgttg tgtgtgtgct gagaggcgcg tccggacagg gcaagtccta tttagcaaac     4740

atgatggctc aggctatttc tcttctccta actgggaaac agaacagtgt gtggagttgc     4800

ccacccgacc ccacatactt tgatggttat aacggacaag ctgttgtcat aatggatgac     4860

ttgggccaaa accctaacgg agcagatttc aagtatttct gtcagatggt gtcaactaca     4920

gcctttgttc caccaatggc ccacttggat gacaagggaa ttccctttac ctctcctgtt     4980

gttatttgta ctacaaattt gcattcctct ttcaccccaa ttactgtgtc atgtcctgag     5040

gctctgaaaa gaaggttccg gtttgacgtg actgtttctg ctaagcctgg ttttgtgagg     5100

actgtggggt cgtctcagct tttgaacttg cctcttgctt tgaagcctgc tggtcttcca     5160

cctcatccta tttttgagaa tgacatgccc attttgaatg gtcaggctgt gaaattggct     5220

ttgtcaggtg ttgaagtgac cgcctttgag ttaattgaga tgattttgtc tgaggtgcag     5280

aatagacagg acacacacaa gatgcctatt tttaaacagt cctggtctga tttgttcaag     5340

aagtgtacaa gtgatgagga acagaagatg ttgcagtttc tgattgatca caaggattct     5400

gaaattttga aggcgtttgt ttcagagcgc tctattatgc tgcatgaaga gtacatgaaa     5460

tgggagtctt atatgaccag aagggccaag tatcatcgct tggcggcaga ttttgctatg     5520

ttcttgtcta ttcttacatc attgattgtt attttttgct tggtgtattc tatgtatcag     5580

cttttcaaaa ctccagatga gcattcggct tatgacccag caaccaaacc aaagcccaag     5640

acacaggaaa ttaagacact aaagattcgc acagaaacag gcgtgcctgc cacagacctg     5700

cagcagtccg tgatgaaaaa tgttcagcca attgagttgt actgtgaggg taatctggtt     5760

actgactgct cagcactggg tgtttatgac aactcctact tggtaccttt acatttgttt     5820

gagtttgatt ttgacaccat tgtgctgggc gggcgccagt atagcaaggc agactgtgag     5880

aaggttgagt ttgagctcag cgtcggaggg gacatggtgt cgtctgatgc ctgtctgctt     5940

cgactccctt cgggtcccaa agttagaaac atacttcatt tgtttaccaa tgaaattgag     6000

ctcaaaaaga tgacccaaat tacaggaatt atgaattctc cacaccaagc acgtactgtg     6060

ttttttggca gttttttgac agttaagaaa tccattctta catctgatgg gactgtaatg     6120

cctaatgttt tgtcctatgc ggcccagacc tcacggggtt actgtggagc tgcaattgtg     6180

gccgggtctc cggctcgcat tataggcata cattccgctg gaactggctc agttgctttt     6240

tgttctctgg tgtccagaga cgctttggag cggaccctgc ctcagaaaca aggaaatgtg     6300

gtccgtttgg atgatgatgt aagagtgtct gttccgcgcc gtaccaaatt ggttaaatca     6360

ttggcctacc ccattttcaa acccgatttt gggccagcac ctctgtccca gtttgacaaa     6420

agattggcag acggcgtgaa acttgatgaa gttgtgtttg ctaagcacac aggagacaag     6480

gagatctctg cacctgacca aaagtggctg ctccgcgcag ctcatgttta tgcccagaaa     6540

gtcttctccc gcattgggtt tgataaccag gcattgaccg aggaggaggc catttgcggc     6600

attcctggac ttgacaaaat ggaacaagac actgctccgg gcttacccta tgcacagcag     6660

aacaagagaa gaaaagacat ttgtgacttt gagaaaggcc agttaaaggg ggctgctaag     6720

ctccagaaag agcggtttct taaaggagac tactccgatt tggtctatca atcatttcta     6780

aaggatgaaa ttcggccact tgaaaaagtt agggctggca agacccggct gatcgatgtg     6840

cccccgatgc cccatgtggt tgtcgggcgg caactcctcg gccggtttgt ctccaaattc     6900

cacgaagcaa atggatttga gattggttct gcaataggat gtgaccctga tgtggattgg     6960

actcggtttg gccttgagct cgagcggtat aggtatgttt atgcctgtga ctattctcgg     7020

tttgatgcca accacgctgc tgatgctatg agagttgttc tcaactattt cttctctgag     7080

gaccacgggt tcgaccctgg tgtacccgcc ttcatcgagt ctcttattga ctcggtgcat     7140

gcttatgaag agaagagata taatatttat ggaggtttac cctctgggtg ttcttgcacc     7200

tcaattttga atactgtttt gaataatgtt tacattcttg cagcaatgat gaaggctttt     7260

gaaaattttg agcctgatga tattttggtt ttatgctatg gggatgattg cctcatagcc     7320

tctgatttgg aaattgattt tcagaaactt gtccctgtct ttgcagattt tgggcaagtt     7380

attactactg ctgacaagac tgactttttt aaacttacca cgctttctga ggttactttt     7440

ttgaagcgtg cttttgttcc tgacggggcg ctttacaagc cagttatgga tgtgaagacc     7500

ctggaagcaa tcctcagttt cgttcgccct ggtacacagg ctgagaagct cctctctgtt     7560

gcgcagttgg ccggccactg cgaaccggat gagtatgagc acctgtttca gccgtttgag     7620

gggatgtatt acgtccctac ttggcgtgac ttgcgcctcc agtggttgat gaagcttgga     7680

tgctaaactt ttttttggtt ttgtttttct ttgtttttct tttaatctgt agagttaaga     7740

tttttagatt aagagttttt tggaattaga taagagttta gtgagtagtt ttgagcaaaa     7800

aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa                            7839


<210> 3
<211> 2248
<212> PRT
<213> Equine rhinitis A virus

<400> 3
Met Met Ala Ala Ser Lys Val Tyr Arg Val Cys Glu Gln Thr Leu Leu 
1               5                   10                  15      


Ala Gly Ala Val Arg Met Met Asp Lys Phe Leu Gln Lys Arg Val Val 
            20                  25                  30          


Phe Val Pro His Leu Asp Lys Gln Val Arg Leu Thr Gly Leu His Asn 
        35                  40                  45              


Tyr Asp Asn Thr Cys Trp Leu Asn Ala Leu Thr Gln Leu Thr Gln Ile 
    50                  55                  60                  


Leu Gly Ile Arg Leu Phe Asp Glu His Phe Gly Asn Arg Gly Leu Phe 
65                  70                  75                  80  


Thr Arg Lys Thr Ile Asp Trp Val Ser Asp Gln Thr Gly Ile Lys Asp 
                85                  90                  95      


Leu Lys Ser Gly Ala Pro Pro Leu Val Val Val Tyr Lys Leu Trp Gln 
            100                 105                 110         


His Gly His Leu Asp Val Gly Thr Met Glu Lys Pro Arg Pro Ile Thr 
        115                 120                 125             


Leu Trp Ser Gly Pro Lys Val Cys Leu Ser Asp Met Trp Ala Cys Val 
    130                 135                 140                 


Ser Ala Lys Pro Gly His Ala Val Phe Tyr Leu Leu Thr Asp Glu Gly 
145                 150                 155                 160 


Trp Ile Cys Ile Asp Asp Lys Lys Ile Tyr Tyr Glu Thr Pro Glu Pro 
                165                 170                 175     


Asp Asp Val Leu Val Phe Ala Pro Tyr Asp Phe Glu Ser Leu Gly Lys 
            180                 185                 190         


Asp Pro Pro Arg Leu His Gln Arg Tyr Glu Lys Ala Phe Lys Lys Leu 
        195                 200                 205             


Ser Gly Ala Gly Thr Ser Thr Pro Thr Thr Gly Asn Gln Asn Met Ser 
    210                 215                 220                 


Gly Asn Ser Gly Ser Ile Val Gln Asn Phe Tyr Met Gln Gln Tyr Gln 
225                 230                 235                 240 


Asn Ser Ile Asp Ala Asp Leu Gly Asp Asn Val Ile Ser Pro Glu Gly 
                245                 250                 255     


Gln Gly Ser Asn Thr Ser Ser Ser Thr Ser Ser Ser Gln Ser Ser Gly 
            260                 265                 270         


Leu Gly Gly Trp Phe Ser Ser Leu Leu Asn Leu Gly Thr Lys Leu Leu 
        275                 280                 285             


Ala Asp Lys Lys Thr Glu Glu Thr Thr Asn Ile Glu Asp Arg Ile Glu 
    290                 295                 300                 


Thr Thr Val Val Gly Val Thr Ile Ile Asn Ser Gln Gly Ser Val Gly 
305                 310                 315                 320 


Thr Thr Tyr Cys Tyr Ser Lys Pro Asp Ser Lys Ala Pro Ser Thr Val 
                325                 330                 335     


Ser Asp Pro Val Thr Arg Leu Gly Pro Thr Leu Ser Arg His Tyr Thr 
            340                 345                 350         


Phe Lys Val Gly Glu Trp Pro His Ser Gln Ser His Gly His Ala Trp 
        355                 360                 365             


Ile Cys Pro Leu Pro Gly Asp Lys Leu Lys Lys Met Gly Ser Phe His 
    370                 375                 380                 


Glu Val Val Lys Ala His His Leu Val Lys Asn Gly Trp Asp Val Val 
385                 390                 395                 400 


Val Gln Val Asn Ala Ser Phe Ala His Ser Gly Ala Leu Cys Val Ala 
                405                 410                 415     


Ala Val Pro Glu Tyr Glu His Thr His Glu Lys Ala Leu Lys Trp Ser 
            420                 425                 430         


Glu Leu Glu Glu Pro Ala Tyr Thr Tyr Gln Gln Leu Ser Val Phe Pro 
        435                 440                 445             


His Gln Leu Leu Asn Leu Arg Thr Asn Ser Ser Val His Leu Val Met 
    450                 455                 460                 


Pro Tyr Ile Gly Pro Gly Pro Thr Thr Asn Leu Thr Leu His Asn Pro 
465                 470                 475                 480 


Trp Thr Ile Val Ile Leu Ile Leu Ser Glu Leu Thr Gly Pro Gly Gln 
                485                 490                 495     


Thr Val Pro Val Thr Met Ser Val Ala Pro Ile Asp Ala Met Val Asn 
            500                 505                 510         


Gly Pro Leu Pro Asn Pro Glu Ala Pro Ile Arg Val Val Ser Val Pro 
        515                 520                 525             


Glu Ser Asp Ser Phe Met Ser Ser Val Pro Asp Asn Ser Thr Pro Leu 
    530                 535                 540                 


Tyr Pro Lys Val Val Val Pro Pro Arg Gln Val Pro Gly Arg Phe Thr 
545                 550                 555                 560 


Asn Phe Ile Asp Val Ala Lys Gln Thr Tyr Ser Phe Cys Ser Ile Ser 
                565                 570                 575     


Gly Lys Pro Tyr Phe Glu Val Thr Asn Thr Ser Gly Asp Glu Pro Leu 
            580                 585                 590         


Phe Gln Met Asp Val Ser Leu Ser Ala Ala Glu Leu His Gly Thr Tyr 
        595                 600                 605             


Val Ala Ser Leu Ser Ser Phe Phe Ala Gln Tyr Arg Gly Ser Leu Asn 
    610                 615                 620                 


Phe Asn Phe Ile Phe Thr Gly Ala Ala Ala Thr Lys Ala Lys Phe Leu 
625                 630                 635                 640 


Val Ala Phe Val Pro Pro His Thr Ala Ala Pro Lys Thr Arg Asp Glu 
                645                 650                 655     


Ala Met Ala Cys Ile His Ala Val Trp Asp Val Gly Leu Asn Ser Ala 
            660                 665                 670         


Phe Ser Phe Asn Val Pro Tyr Ser Ser Pro Ala Asp Phe Met Ala Val 
        675                 680                 685             


Tyr Ser Ala Glu Ala Thr Val Val Asn Val Ser Gly Trp Leu Gln Val 
    690                 695                 700                 


Tyr Ala Leu Thr Ala Leu Thr Ser Thr Asp Ile Ala Val Asn Ser Lys 
705                 710                 715                 720 


Gly Arg Val Leu Val Ala Val Ser Ala Gly Pro Asp Phe Ser Leu Arg 
                725                 730                 735     


His Pro Val Asp Leu Pro Asp Lys Gln Val Thr Asn Val Gly Glu Asp 
            740                 745                 750         


Gly Glu Pro Gly Glu Thr Glu Pro Arg Tyr Ala Leu Ser Pro Val Asp 
        755                 760                 765             


Met His Val His Thr Asp Val Ser Phe Leu Leu Asp Arg Phe Phe Asp 
    770                 775                 780                 


Val Glu Thr Ile Glu Leu Ser Asn Leu Thr Gly Ser Pro Thr Thr His 
785                 790                 795                 800 


Ile Leu Asn Pro Phe Gly Ser Thr Ala Gln Leu Ala Trp Ala Arg Leu 
                805                 810                 815     


Leu Asn Thr Cys Thr Tyr Phe Phe Ser Asn Leu Glu Leu Ser Ile Gln 
            820                 825                 830         


Phe Lys Phe Thr Thr Met Pro Ser Ser Val Glu Lys Gly Phe Val Trp 
        835                 840                 845             


Val Lys Trp Phe Pro Val Gly Ala Pro Thr Lys Thr Thr Asp Ala Trp 
    850                 855                 860                 


Gln Leu Glu Gly Gly Gly Asn Ser Val Arg Ile Gln Lys Leu Ala Val 
865                 870                 875                 880 


Ala Gly Leu Ser Pro Thr Val Ile Phe Lys Ile Ala Gly Ser Arg Ser 
                885                 890                 895     


Gln Ala Cys Gly Phe Asn Val Pro Tyr Thr Ser Met Trp Arg Val Val 
            900                 905                 910         


Pro Val Phe Tyr Asn Gly Trp Gly Ala Pro Thr Lys Glu Lys Ala Thr 
        915                 920                 925             


Tyr Asn Trp Leu Pro Gly Ala His Phe Gly Ser Ile Leu Leu Thr Ser 
    930                 935                 940                 


Asp Ala His Asp Lys Gly Gly Cys Tyr Leu Arg Tyr Arg Phe Pro Arg 
945                 950                 955                 960 


Ala Ser Met Tyr Cys Pro Arg Pro Ile Pro Pro Ala Phe Thr Arg Pro 
                965                 970                 975     


Ala Asp Lys Thr Arg His Lys Phe Pro Thr Asn Ile Asn Lys Gln Cys 
            980                 985                 990         


Thr Asn Tyr Ala Leu Leu Lys Leu  Ala Gly Asp Val Glu  Ser Asn Pro 
        995                 1000                 1005             


Gly Pro  Thr Ile Phe Ser Lys  Ala Ser Ala Asp Leu  Asn Ala Leu 
    1010                 1015                 1020             


Ser Thr  Ser Leu Gly Glu Leu  Thr Gly Met Leu Lys  Asp Leu Lys 
    1025                 1030                 1035             


Ala Lys  Ala Glu Thr Tyr Ser  Pro Phe Tyr Lys Met  Ala Lys Met 
    1040                 1045                 1050             


Leu Phe  Lys Leu Ala Thr Leu  Ala Val Ala Ala Met  Arg Thr Lys 
    1055                 1060                 1065             


Asp Pro  Val Val Val Val Met  Leu Ile Ala Asp Phe  Gly Leu Glu 
    1070                 1075                 1080             


Val Phe  Asp Thr Gly Phe Phe  Phe Ser Tyr Phe Gln  Glu Lys Leu 
    1085                 1090                 1095             


Gln Pro  Tyr Met Lys Thr Ile  Pro Gly Lys Val Ser  Asp Leu Val 
    1100                 1105                 1110             


Thr Asp  Ala Ala Thr Ala Ala  Ala Gln Ile Pro Lys  Gly Val Tyr 
    1115                 1120                 1125             


Ser Phe  Val Ser Ser Phe Phe  Glu Thr Pro Glu Gly  Val Val Glu 
    1130                 1135                 1140             


Lys Gln  Val Ser Leu Arg Thr  Ile Asn Asp Ile Phe  Thr Leu Leu 
    1145                 1150                 1155             


Lys Asn  Ser Asp Trp Phe Ile  Lys Thr Leu Val Ala  Leu Lys Lys 
    1160                 1165                 1170             


Trp Leu  Val Ser Trp Phe Lys  Gln Glu Gln Gln Ala  Asp Asp Ala 
    1175                 1180                 1185             


Leu Tyr  Ser Glu Leu Glu Lys  Tyr Pro Leu Tyr Lys  Leu Lys Leu 
    1190                 1195                 1200             


Lys Glu  Pro Asp Thr Gln Glu  Glu Ala Arg Gln Trp  Phe Lys Asp 
    1205                 1210                 1215             


Met Gln  Gln Arg Ala Leu Ala  Val Lys Asp Lys Gly  Leu Phe Ser 
    1220                 1225                 1230             


Leu Leu  Gln Ile Pro Leu Val  Asn Leu Pro Thr Ser  Arg Pro Glu 
    1235                 1240                 1245             


Pro Val  Val Cys Val Leu Arg  Gly Ala Ser Gly Gln  Gly Lys Ser 
    1250                 1255                 1260             


Tyr Leu  Ala Asn Met Met Ala  Gln Ala Ile Ser Leu  Leu Leu Thr 
    1265                 1270                 1275             


Gly Lys  Gln Asn Ser Val Trp  Ser Cys Pro Pro Asp  Pro Thr Tyr 
    1280                 1285                 1290             


Phe Asp  Gly Tyr Asn Gly Gln  Ala Val Val Ile Met  Asp Asp Leu 
    1295                 1300                 1305             


Gly Gln  Asn Pro Asn Gly Ala  Asp Phe Lys Tyr Phe  Cys Gln Met 
    1310                 1315                 1320             


Val Ser  Thr Thr Ala Phe Val  Pro Pro Met Ala His  Leu Asp Asp 
    1325                 1330                 1335             


Lys Gly  Ile Pro Phe Thr Ser  Pro Val Val Ile Cys  Thr Thr Asn 
    1340                 1345                 1350             


Leu His  Ser Ser Phe Thr Pro  Ile Thr Val Ser Cys  Pro Glu Ala 
    1355                 1360                 1365             


Leu Lys  Arg Arg Phe Arg Phe  Asp Val Thr Val Ser  Ala Lys Pro 
    1370                 1375                 1380             


Gly Phe  Val Arg Thr Val Gly  Ser Ser Gln Leu Leu  Asn Leu Pro 
    1385                 1390                 1395             


Leu Ala  Leu Lys Pro Ala Gly  Leu Pro Pro His Pro  Ile Phe Glu 
    1400                 1405                 1410             


Asn Asp  Met Pro Ile Leu Asn  Gly Gln Ala Val Lys  Leu Ala Leu 
    1415                 1420                 1425             


Ser Gly  Val Glu Val Thr Ala  Phe Glu Leu Ile Glu  Met Ile Leu 
    1430                 1435                 1440             


Ser Glu  Val Gln Asn Arg Gln  Asp Thr His Lys Met  Pro Ile Phe 
    1445                 1450                 1455             


Lys Gln  Ser Trp Ser Asp Leu  Phe Lys Lys Cys Thr  Ser Asp Glu 
    1460                 1465                 1470             


Glu Gln  Lys Met Leu Gln Phe  Leu Ile Asp His Lys  Asp Ser Glu 
    1475                 1480                 1485             


Ile Leu  Lys Ala Phe Val Ser  Glu Arg Ser Ile Met  Leu His Glu 
    1490                 1495                 1500             


Glu Tyr  Met Lys Trp Glu Ser  Tyr Met Thr Arg Arg  Ala Lys Tyr 
    1505                 1510                 1515             


His Arg  Leu Ala Ala Asp Phe  Ala Met Phe Leu Ser  Ile Leu Thr 
    1520                 1525                 1530             


Ser Leu  Ile Val Ile Phe Cys  Leu Val Tyr Ser Met  Tyr Gln Leu 
    1535                 1540                 1545             


Phe Lys  Thr Pro Asp Glu His  Ser Ala Tyr Asp Pro  Ala Thr Lys 
    1550                 1555                 1560             


Pro Lys  Pro Lys Thr Gln Glu  Ile Lys Thr Leu Lys  Ile Arg Thr 
    1565                 1570                 1575             


Glu Thr  Gly Val Pro Ala Thr  Asp Leu Gln Gln Ser  Val Met Lys 
    1580                 1585                 1590             


Asn Val  Gln Pro Ile Glu Leu  Tyr Cys Glu Gly Asn  Leu Val Thr 
    1595                 1600                 1605             


Asp Cys  Ser Ala Leu Gly Val  Tyr Asp Asn Ser Tyr  Leu Val Pro 
    1610                 1615                 1620             


Leu His  Leu Phe Glu Phe Asp  Phe Asp Thr Ile Val  Leu Gly Gly 
    1625                 1630                 1635             


Arg Gln  Tyr Ser Lys Ala Asp  Cys Glu Lys Val Glu  Phe Glu Leu 
    1640                 1645                 1650             


Ser Val  Gly Gly Asp Met Val  Ser Ser Asp Ala Cys  Leu Leu Arg 
    1655                 1660                 1665             


Leu Pro  Ser Gly Pro Lys Val  Arg Asn Ile Leu His  Leu Phe Thr 
    1670                 1675                 1680             


Asn Glu  Ile Glu Leu Lys Lys  Met Thr Gln Ile Thr  Gly Ile Met 
    1685                 1690                 1695             


Asn Ser  Pro His Gln Ala Arg  Thr Val Phe Phe Gly  Ser Phe Leu 
    1700                 1705                 1710             


Thr Val  Lys Lys Ser Ile Leu  Thr Ser Asp Gly Thr  Val Met Pro 
    1715                 1720                 1725             


Asn Val  Leu Ser Tyr Ala Ala  Gln Thr Ser Arg Gly  Tyr Cys Gly 
    1730                 1735                 1740             


Ala Ala  Ile Val Ala Gly Ser  Pro Ala Arg Ile Ile  Gly Ile His 
    1745                 1750                 1755             


Ser Ala  Gly Thr Gly Ser Val  Ala Phe Cys Ser Leu  Val Ser Arg 
    1760                 1765                 1770             


Asp Ala  Leu Glu Arg Thr Leu  Pro Gln Lys Gln Gly  Asn Val Val 
    1775                 1780                 1785             


Arg Leu  Asp Asp Asp Val Arg  Val Ser Val Pro Arg  Arg Thr Lys 
    1790                 1795                 1800             


Leu Val  Lys Ser Leu Ala Tyr  Pro Ile Phe Lys Pro  Asp Phe Gly 
    1805                 1810                 1815             


Pro Ala  Pro Leu Ser Gln Phe  Asp Lys Arg Leu Ala  Asp Gly Val 
    1820                 1825                 1830             


Lys Leu  Asp Glu Val Val Phe  Ala Lys His Thr Gly  Asp Lys Glu 
    1835                 1840                 1845             


Ile Ser  Ala Pro Asp Gln Lys  Trp Leu Leu Arg Ala  Ala His Val 
    1850                 1855                 1860             


Tyr Ala  Gln Lys Val Phe Ser  Arg Ile Gly Phe Asp  Asn Gln Ala 
    1865                 1870                 1875             


Leu Thr  Glu Glu Glu Ala Ile  Cys Gly Ile Pro Gly  Leu Asp Lys 
    1880                 1885                 1890             


Met Glu  Gln Asp Thr Ala Pro  Gly Leu Pro Tyr Ala  Gln Gln Asn 
    1895                 1900                 1905             


Lys Arg  Arg Lys Asp Ile Cys  Asp Phe Glu Lys Gly  Gln Leu Lys 
    1910                 1915                 1920             


Gly Ala  Ala Lys Leu Gln Lys  Glu Arg Phe Leu Lys  Gly Asp Tyr 
    1925                 1930                 1935             


Ser Asp  Leu Val Tyr Gln Ser  Phe Leu Lys Asp Glu  Ile Arg Pro 
    1940                 1945                 1950             


Leu Glu  Lys Val Arg Ala Gly  Lys Thr Arg Leu Ile  Asp Val Pro 
    1955                 1960                 1965             


Pro Met  Pro His Val Val Val  Gly Arg Gln Leu Leu  Gly Arg Phe 
    1970                 1975                 1980             


Val Ser  Lys Phe His Glu Ala  Asn Gly Phe Glu Ile  Gly Ser Ala 
    1985                 1990                 1995             


Ile Gly  Cys Asp Pro Asp Val  Asp Trp Thr Arg Phe  Gly Leu Glu 
    2000                 2005                 2010             


Leu Glu  Arg Tyr Arg Tyr Val  Tyr Ala Cys Asp Tyr  Ser Arg Phe 
    2015                 2020                 2025             


Asp Ala  Asn His Ala Ala Asp  Ala Met Arg Val Val  Leu Asn Tyr 
    2030                 2035                 2040             


Phe Phe  Ser Glu Asp His Gly  Phe Asp Pro Gly Val  Pro Ala Phe 
    2045                 2050                 2055             


Ile Glu  Ser Leu Ile Asp Ser  Val His Ala Tyr Glu  Glu Lys Arg 
    2060                 2065                 2070             


Tyr Asn  Ile Tyr Gly Gly Leu  Pro Ser Gly Cys Ser  Cys Thr Ser 
    2075                 2080                 2085             


Ile Leu  Asn Thr Val Leu Asn  Asn Val Tyr Ile Leu  Ala Ala Met 
    2090                 2095                 2100             


Met Lys  Ala Phe Glu Asn Phe  Glu Pro Asp Asp Ile  Leu Val Leu 
    2105                 2110                 2115             


Cys Tyr  Gly Asp Asp Cys Leu  Ile Ala Ser Asp Leu  Glu Ile Asp 
    2120                 2125                 2130             


Phe Gln  Lys Leu Val Pro Val  Phe Ala Asp Phe Gly  Gln Val Ile 
    2135                 2140                 2145             


Thr Thr  Ala Asp Lys Thr Asp  Phe Phe Lys Leu Thr  Thr Leu Ser 
    2150                 2155                 2160             


Glu Val  Thr Phe Leu Lys Arg  Ala Phe Val Pro Asp  Gly Ala Leu 
    2165                 2170                 2175             


Tyr Lys  Pro Val Met Asp Val  Lys Thr Leu Glu Ala  Ile Leu Ser 
    2180                 2185                 2190             


Phe Val  Arg Pro Gly Thr Gln  Ala Glu Lys Leu Leu  Ser Val Ala 
    2195                 2200                 2205             


Gln Leu  Ala Gly His Cys Glu  Pro Asp Glu Tyr Glu  His Leu Phe 
    2210                 2215                 2220             


Gln Pro  Phe Glu Gly Met Tyr  Tyr Val Pro Thr Trp  Arg Asp Leu 
    2225                 2230                 2235             


Arg Leu  Gln Trp Leu Met Lys  Leu Gly Cys 
    2240                 2245             


<210> 4
<211> 20
<212> DNA
<213> Artificial Sequence

<220>
<221> source
<223> /note="Description of Artificial Sequence: Synthetic
      primer"

<400> 4
tgaatagcaa gggccgtgtt                                                   20


<210> 5
<211> 22
<212> DNA
<213> Artificial Sequence

<220>
<221> source
<223> /note="Description of Artificial Sequence: Synthetic
      primer"

<400> 5
accgttgtaa aagactggca ca                                                22


<210> 6
<211> 22
<212> DNA
<213> Artificial Sequence

<220>
<221> source
<223> /note="Description of Artificial Sequence: Synthetic
      primer"

<400> 6
gtcagtaaaa cgcaacaacc at                                                22


<210> 7
<211> 22
<212> DNA
<213> Artificial Sequence

<220>
<221> source
<223> /note="Description of Artificial Sequence: Synthetic
      primer"

<400> 7
tgtgaagaat gtcctgaagg ca                                                22


<210> 8
<211> 22
<212> DNA
<213> Artificial Sequence

<220>
<221> source
<223> /note="Description of Artificial Sequence: Synthetic
      primer"

<400> 8
accatccacc taaaccagac ga                                                22


<210> 9
<211> 22
<212> DNA
<213> Artificial Sequence

<220>
<221> source
<223> /note="Description of Artificial Sequence: Synthetic
      primer"

<400> 9
attggctttg tcaggtgttg aa                                                22


<210> 10
<211> 22
<212> DNA
<213> Artificial Sequence

<220>
<221> source
<223> /note="Description of Artificial Sequence: Synthetic
      primer"

<400> 10
gtttctaact ttgggacccg aa                                                22


<210> 11
<211> 22
<212> DNA
<213> Artificial Sequence

<220>
<221> source
<223> /note="Description of Artificial Sequence: Synthetic
      primer"

<400> 11
tggatttgag attggttctg ca                                                22


<210> 12
<211> 20
<212> DNA
<213> Artificial Sequence

<220>
<221> source
<223> /note="Description of Artificial Sequence: Synthetic
      primer"

<400> 12
gcgaacgaaa ctgaggattg                                                   20


<210> 13
<211> 20
<212> DNA
<213> Artificial Sequence

<220>
<221> source
<223> /note="Description of Artificial Sequence: Synthetic
      oligonucleotide"

<400> 13
ctgtagcgtc agtaaaacgc                                                   20


<210> 14
<211> 340
<212> DNA
<213> Equine rhinitis A virus

<400> 14
acttttagga gatgaccaaa cgcagtaacc gcaagcaatt gcctgtagcg tcagtaaaac       60

gcaatacaca agatttgagc ctgtagcgtc agtaaaacgc tgcaaccaca agctattgac      120

tgtagcgtca gtaaaacgca aacattcttg tggcgctcgc gtagcgctca agtgcagagc      180

ttcccggctt taagggttac tgctcgtaat gagagcacat gacattttgc caagatttcc      240

tggcaattgt cacgggagag aggagcccgt tctcgggcac ttttctctca aacaatgttg      300

gcgcgcctcg gcgcgccccc cctttttcag ccccctgtca                            340


