SEQUENCE LISTING

<110>  Intervet International B.V.
 
<120>  Salmonid Alphavirus protein

<130>  2010.029

<160>  13    

<170>  PatentIn version 3.5

<210>  1
<211>  31
<212>  DNA
<213>  salmonid alphavirus

<400>  1
ccgcgcgagc ccctggtatg caacacagtg c                                      31


<210>  2
<211>  33
<212>  DNA
<213>  salmonid alphavirus

<400>  2
ataccagggg ctcgcgcctc gagaccctac ttg                                    33


<210>  3
<211>  33
<212>  DNA
<213>  salmonid alphavirus

<400>  3
gatgccataa gcttgacacg cgctccggcc ctc                                    33


<210>  4
<211>  28
<212>  DNA
<213>  salmonid alphavirus

<400>  4
cgtcactttc accagcgact cccagacg                                          28


<210>  5
<211>  29
<212>  DNA
<213>  salmonid alphavirus

<400>  5
ggatccattc ggatgtggcg ttgctatgg                                         29


<210>  6
<211>  35
<212>  DNA
<213>  salmonid alphavirus

<400>  6
ccctcctgct gctgcatatg gttattgtct gcacc                                  35


<210>  7
<211>  35
<212>  DNA
<213>  salmonid alphavirus

<400>  7
ggtgcagaca ataaccatat gcagcagcag gaggg                                  35


<210>  8
<211>  41
<212>  DNA
<213>  salmonid alphavirus

<400>  8
gcatacctgg ggctcgtgcg tgacaaccct acctggacat c                           41


<210>  9
<211>  41
<212>  DNA
<213>  salmonid alphavirus

<400>  9
gatgtccagg tagggttgtc acgcacgagc cccaggtatg c                           41


<210>  10
<211>  19
<212>  DNA
<213>  salmonid alphavirus

<400>  10
aatacgactc actataggg                                                    19


<210>  11
<211>  19
<212>  DNA
<213>  salmonid alphavirus

<400>  11
gctagttatt gctcagcgg                                                    19


<210>  12
<211>  1611
<212>  DNA
<213>  salmonid alphavirus


<220>
<221>  CDS
<222>  (1)..(1512)

<400>  12
gga gat ata cat atg gtg att gtc tgc acc tac aac tcc aac acc ttt         48
Gly Asp Ile His Met Val Ile Val Cys Thr Tyr Asn Ser Asn Thr Phe           
1               5                   10                  15                

gat tgc tcc aaa ccg tcc tgc cag gac tgt tgt atc act gct gaa cca         96
Asp Cys Ser Lys Pro Ser Cys Gln Asp Cys Cys Ile Thr Ala Glu Pro           
            20                  25                  30                    

aag aag gcc atg gct atg ttg aag gac aac ctg aac gac ccg aac tat        144
Lys Lys Ala Met Ala Met Leu Lys Asp Asn Leu Asn Asp Pro Asn Tyr           
        35                  40                  45                        

tgg gac cta ctc att gcc gtc acc acc tgc aat tcc gcc cgg aaa aag        192
Trp Asp Leu Leu Ile Ala Val Thr Thr Cys Asn Ser Ala Arg Lys Lys           
    50                  55                  60                            

agg gct gtg tct acg tca cct gcc gcc gtt tac gac aca caa atc ctc        240
Arg Ala Val Ser Thr Ser Pro Ala Ala Val Tyr Asp Thr Gln Ile Leu           
65                  70                  75                  80            

gcc gcc cac gca gct gcc tcc ccg tac agg gcg tat tgc ccc gac tgt        288
Ala Ala His Ala Ala Ala Ser Pro Tyr Arg Ala Tyr Cys Pro Asp Cys           
                85                  90                  95                

gat gga act gcc tgc atc tcg ccg ata gct att gac gag gtg gta agc        336
Asp Gly Thr Ala Cys Ile Ser Pro Ile Ala Ile Asp Glu Val Val Ser           
            100                 105                 110                   

agc ggt agc gac cac gtc ctc cgc atc cgg gtc ggt tct caa tcg gga        384
Ser Gly Ser Asp His Val Leu Arg Ile Arg Val Gly Ser Gln Ser Gly           
        115                 120                 125                       

gtg acc gct aaa ggc ggt gcg gcg ggt gaa aca tct ctg cga tac ctg        432
Val Thr Ala Lys Gly Gly Ala Ala Gly Glu Thr Ser Leu Arg Tyr Leu           
    130                 135                 140                           

gga agg gac ggt aag gtg cac gcc gcg gac aac acg cgg ctt gtg gtg        480
Gly Arg Asp Gly Lys Val His Ala Ala Asp Asn Thr Arg Leu Val Val           
145                 150                 155                 160           

cgc acc act gca aag tgc gat gtg ctg cag gcc acc ggc cac tac atc        528
Arg Thr Thr Ala Lys Cys Asp Val Leu Gln Ala Thr Gly His Tyr Ile           
                165                 170                 175               

ctg gcc agc tgc cca gaa ggg cag agt att act gtt gcg gcc aca ctg        576
Leu Ala Ser Cys Pro Glu Gly Gln Ser Ile Thr Val Ala Ala Thr Leu           
            180                 185                 190                   

gac ggc acc cgc cac caa tgc acc acg gtt ttc gaa cat caa gta acg        624
Asp Gly Thr Arg His Gln Cys Thr Thr Val Phe Glu His Gln Val Thr           
        195                 200                 205                       

gag aag ttc acc aga gaa cgc agc aag ggc cac cac ttg tcc gac ctg        672
Glu Lys Phe Thr Arg Glu Arg Ser Lys Gly His His Leu Ser Asp Leu           
    210                 215                 220                           

acc aag aag tgc acc aga ttt tcc acc acc ccg aag aag tcc gcc ccc        720
Thr Lys Lys Cys Thr Arg Phe Ser Thr Thr Pro Lys Lys Ser Ala Pro           
225                 230                 235                 240           

tac ctc gtt gac gtg tac gac gct ctg ccg att tct gta gag att agc        768
Tyr Leu Val Asp Val Tyr Asp Ala Leu Pro Ile Ser Val Glu Ile Ser           
                245                 250                 255               

acc gtt gta aca tgc aac gac aat cag tgc aca gtg agg gtg tca ccc        816
Thr Val Val Thr Cys Asn Asp Asn Gln Cys Thr Val Arg Val Ser Pro           
            260                 265                 270                   

ggt acc aca gtg aaa ttc gat aag aag tgc aag agc gct gcc caa gcg        864
Gly Thr Thr Val Lys Phe Asp Lys Lys Cys Lys Ser Ala Ala Gln Ala           
        275                 280                 285                       

acc gtt acc ttt acc agc gac tcc cag acg ttt acg tgt gag gag ccg        912
Thr Val Thr Phe Thr Ser Asp Ser Gln Thr Phe Thr Cys Glu Glu Pro           
    290                 295                 300                           

gtt ctg acg gcc gcc agt atc acc cag ggc aag ccg cac ctt aga tca        960
Val Leu Thr Ala Ala Ser Ile Thr Gln Gly Lys Pro His Leu Arg Ser           
305                 310                 315                 320           

tct atg ttg ccc agc gga ggc aag gaa gtg aag gcg agg atc cca ttc       1008
Ser Met Leu Pro Ser Gly Gly Lys Glu Val Lys Ala Arg Ile Pro Phe           
                325                 330                 335               

ccg ttc ccg cca gag acc gcg acc tgc aga gta agt gtc gcc ccg ctg       1056
Pro Phe Pro Pro Glu Thr Ala Thr Cys Arg Val Ser Val Ala Pro Leu           
            340                 345                 350                   

ccg tcg atc acc tat gag gaa agc gac gtt ctg ctg gcc ggt acc gcg       1104
Pro Ser Ile Thr Tyr Glu Glu Ser Asp Val Leu Leu Ala Gly Thr Ala           
        355                 360                 365                       

aag tac ccc gtg ctg ctg act aca cgg aac ctt ggt ttc cac agc aat       1152
Lys Tyr Pro Val Leu Leu Thr Thr Arg Asn Leu Gly Phe His Ser Asn           
    370                 375                 380                           

gcc aca tcc gaa tgg atc cag ggt aag tac ttg cgc cgt atc ccg gtc       1200
Ala Thr Ser Glu Trp Ile Gln Gly Lys Tyr Leu Arg Arg Ile Pro Val           
385                 390                 395                 400           

acg ccc caa ggg atc gaa cta acg tgg gga aat aac gca ccg ttg cac       1248
Thr Pro Gln Gly Ile Glu Leu Thr Trp Gly Asn Asn Ala Pro Leu His           
                405                 410                 415               

ttc tgg tca tct gtt agg tac gca tct ggg gac gcc gac gcg tac cct       1296
Phe Trp Ser Ser Val Arg Tyr Ala Ser Gly Asp Ala Asp Ala Tyr Pro           
            420                 425                 430                   

tgg gaa ctt ctg gtg cac cac acc aag cac cat ccg gag tac gcg tgg       1344
Trp Glu Leu Leu Val His His Thr Lys His His Pro Glu Tyr Ala Trp           
        435                 440                 445                       

gcg ttt gta gga gtt gca tgt ggt ctg ctg gtt att gca gta tgc atg       1392
Ala Phe Val Gly Val Ala Cys Gly Leu Leu Val Ile Ala Val Cys Met           
    450                 455                 460                           

ttc gcg tgc gca tgc aac aga gtg cgg tac tct ttg gtc gcc aac acg       1440
Phe Ala Cys Ala Cys Asn Arg Val Arg Tyr Ser Leu Val Ala Asn Thr           
465                 470                 475                 480           

ttc aac ccg aac cca cca cca ctg acc gca ctg act gca gca ttg tgc       1488
Phe Asn Pro Asn Pro Pro Pro Leu Thr Ala Leu Thr Ala Ala Leu Cys           
                485                 490                 495               

tgc ata cct ggg gct cgt gcg tga caaccctacc tggacatcat tgcctacttg      1542
Cys Ile Pro Gly Ala Arg Ala                                               
            500                                                           

tggaagggcg aattctgcag atatccatca cactggcggc cgctcgagca ccaccaccac     1602

caccactga                                                             1611


<210>  13
<211>  503
<212>  PRT
<213>  salmonid alphavirus

<400>  13

Gly Asp Ile His Met Val Ile Val Cys Thr Tyr Asn Ser Asn Thr Phe 
1               5                   10                  15      


Asp Cys Ser Lys Pro Ser Cys Gln Asp Cys Cys Ile Thr Ala Glu Pro 
            20                  25                  30          


Lys Lys Ala Met Ala Met Leu Lys Asp Asn Leu Asn Asp Pro Asn Tyr 
        35                  40                  45              


Trp Asp Leu Leu Ile Ala Val Thr Thr Cys Asn Ser Ala Arg Lys Lys 
    50                  55                  60                  


Arg Ala Val Ser Thr Ser Pro Ala Ala Val Tyr Asp Thr Gln Ile Leu 
65                  70                  75                  80  


Ala Ala His Ala Ala Ala Ser Pro Tyr Arg Ala Tyr Cys Pro Asp Cys 
                85                  90                  95      


Asp Gly Thr Ala Cys Ile Ser Pro Ile Ala Ile Asp Glu Val Val Ser 
            100                 105                 110         


Ser Gly Ser Asp His Val Leu Arg Ile Arg Val Gly Ser Gln Ser Gly 
        115                 120                 125             


Val Thr Ala Lys Gly Gly Ala Ala Gly Glu Thr Ser Leu Arg Tyr Leu 
    130                 135                 140                 


Gly Arg Asp Gly Lys Val His Ala Ala Asp Asn Thr Arg Leu Val Val 
145                 150                 155                 160 


Arg Thr Thr Ala Lys Cys Asp Val Leu Gln Ala Thr Gly His Tyr Ile 
                165                 170                 175     


Leu Ala Ser Cys Pro Glu Gly Gln Ser Ile Thr Val Ala Ala Thr Leu 
            180                 185                 190         


Asp Gly Thr Arg His Gln Cys Thr Thr Val Phe Glu His Gln Val Thr 
        195                 200                 205             


Glu Lys Phe Thr Arg Glu Arg Ser Lys Gly His His Leu Ser Asp Leu 
    210                 215                 220                 


Thr Lys Lys Cys Thr Arg Phe Ser Thr Thr Pro Lys Lys Ser Ala Pro 
225                 230                 235                 240 


Tyr Leu Val Asp Val Tyr Asp Ala Leu Pro Ile Ser Val Glu Ile Ser 
                245                 250                 255     


Thr Val Val Thr Cys Asn Asp Asn Gln Cys Thr Val Arg Val Ser Pro 
            260                 265                 270         


Gly Thr Thr Val Lys Phe Asp Lys Lys Cys Lys Ser Ala Ala Gln Ala 
        275                 280                 285             


Thr Val Thr Phe Thr Ser Asp Ser Gln Thr Phe Thr Cys Glu Glu Pro 
    290                 295                 300                 


Val Leu Thr Ala Ala Ser Ile Thr Gln Gly Lys Pro His Leu Arg Ser 
305                 310                 315                 320 


Ser Met Leu Pro Ser Gly Gly Lys Glu Val Lys Ala Arg Ile Pro Phe 
                325                 330                 335     


Pro Phe Pro Pro Glu Thr Ala Thr Cys Arg Val Ser Val Ala Pro Leu 
            340                 345                 350         


Pro Ser Ile Thr Tyr Glu Glu Ser Asp Val Leu Leu Ala Gly Thr Ala 
        355                 360                 365             


Lys Tyr Pro Val Leu Leu Thr Thr Arg Asn Leu Gly Phe His Ser Asn 
    370                 375                 380                 


Ala Thr Ser Glu Trp Ile Gln Gly Lys Tyr Leu Arg Arg Ile Pro Val 
385                 390                 395                 400 


Thr Pro Gln Gly Ile Glu Leu Thr Trp Gly Asn Asn Ala Pro Leu His 
                405                 410                 415     


Phe Trp Ser Ser Val Arg Tyr Ala Ser Gly Asp Ala Asp Ala Tyr Pro 
            420                 425                 430         


Trp Glu Leu Leu Val His His Thr Lys His His Pro Glu Tyr Ala Trp 
        435                 440                 445             


Ala Phe Val Gly Val Ala Cys Gly Leu Leu Val Ile Ala Val Cys Met 
    450                 455                 460                 


Phe Ala Cys Ala Cys Asn Arg Val Arg Tyr Ser Leu Val Ala Asn Thr 
465                 470                 475                 480 


Phe Asn Pro Asn Pro Pro Pro Leu Thr Ala Leu Thr Ala Ala Leu Cys 
                485                 490                 495     


Cys Ile Pro Gly Ala Arg Ala 
            500             



