
                                SEQUENCE LISTING

<110> Sanford-Burnham Medical Research Institute

<120> COMPOSITIONS RELATING TO A PHOSPHOPROTEIN AND METHODS OF USE
  
<130> 12968-096-228

<140> PCT/US2011/066878   
<141> 2011-12-22  

<150> 61/426,464          
<151> 2010-12-22  

<150> 61/431,713          
<151> 2011-01-11  

<160> 15

<170> FastSEQ for Windows Version 4.0

<210> 1
<211> 12
<212> PRT
<213> Artificial Sequence

<220> 
<223> a fragment of CDP138

<400> 1
Ala Ser Asp Leu Thr Asp Ala Phe Val Glu Val Lys
 1               5                  10          


<210> 2
<211> 23
<212> PRT
<213> Artificial Sequence

<220> 
<223> fragment of AA 189-211 of CDP138

<400> 2
Asn Glu Ala Arg Gln Arg Leu Ile Ser Leu Met Ser Gly Glu Leu Gln
 1               5                  10                  15      
Arg Lys Ile Gly Leu Lys Val
            20              


<210> 3
<211> 94
<212> PRT
<213> homo sapiens

<220> 
<223> AA 3-97 of human CDP138-C2

<400> 3
Lys Leu Lys Val Lys Ile Val Ala Gly Arg His Leu Pro Val Met Asp
 1               5                  10                  15      
Arg Ala Ser Asp Leu Thr Asp Ala Phe Val Glu Val Lys Phe Gly Asn
            20                  25                  30          
Thr Thr Phe Lys Thr Asp Val Tyr Leu Lys Ser Leu Asn Pro Gln Trp
        35                  40                  45              
Asn Ser Glu Trp Phe Lys Phe Glu Val Asp Asp Glu Asp Leu Gln Asp
    50                  55                  60                  
Glu Pro Leu Gln Ile Thr Val Leu Asp His Asp Thr Tyr Ser Ala Asn
65                  70                  75                  80  
Asp Ala Ile Gly Lys Val Tyr Ile Asp Ile Asp Pro Leu Leu
                85                  90                  


<210> 4
<211> 95
<212> PRT
<213> homo sapiens

<220> 
<223> AA 157-251 of human Sytg1-C2A

<400> 4
Gln Leu Leu Val Gly Ile Ile Gln Ala Ala Glu Leu Pro Ala Leu Asp
 1               5                  10                  15      
Met Gly Gly Thr Ser Asp Pro Tyr Val Lys Val Phe Leu Leu Pro Asp
            20                  25                  30          
Lys Lys Lys Lys Phe Glu Thr Lys Val His Arg Lys Thr Leu Asn Pro
        35                  40                  45              
Val Phe Asn Glu Gln Phe Thr Phe Lys Val Pro Tyr Ser Glu Leu Gly
    50                  55                  60                  
Gly Lys Thr Leu Val Met Ala Val Tyr Asp Phe Asp Arg Phe Ser Lys
65                  70                  75                  80  
His Asp Ile Ile Gly Glu Phe Lys Val Pro Met Asn Thr Val Asp
                85                  90                  95  


<210> 5
<211> 97
<212> PRT
<213> homo sapiens

<220> 
<223> AA 288-384 of human Sytg1-C2B

<400> 5
Lys Leu Thr Val Val Ile Leu Glu Ala Lys Asn Leu Lys Lys Met Asp
 1               5                  10                  15      
Val Gly Gly Leu Ser Asp Pro Tyr Val Lys Ile His Leu Met Gln Asn
            20                  25                  30          
Gly Lys Arg Leu Lys Lys Lys Lys Thr Thr Ile Lys Lys Asn Thr Leu
        35                  40                  45              
Asn Pro Tyr Tyr Asn Glu Ser Phe Ser Phe Glu Val Pro Phe Glu Gln
    50                  55                  60                  
Ile Gln Lys Val Gln Val Val Val Thr Val Leu Asp Tyr Asp Lys Ile
65                  70                  75                  80  
Gly Lys Asn Asp Ala Ile Gly Lys Val Phe Val Gly Tyr Asn Ser Thr
                85                  90                  95      
Gly
    


<210> 6
<211> 20
<212> PRT
<213> Artificial Sequence

<220> 
<223> peptide of kiaa0528 used to generate rabbit pAb antibody

<400> 6
Thr Lys Pro His Val Glu Lys Ser Leu Gln Arg Ala Ser Thr Asp Asn
 1               5                  10                  15      
Glu Glu Leu Cys
            20  


<210> 7
<211> 19
<212> RNA
<213> Artificial Sequence

<220> 
<223> one of smart pool siRNAs targeting sequences for mouse 5730419I09RIK

<400> 7
gcaagguuau gucgauuaa                                              19


<210> 8
<211> 19
<212> RNA
<213> Artificial Sequence

<220> 
<223> one of smart pool siRNAs targeting sequences for mouse 5730419I09RIK

<400> 8
ggccacagga gucuacuua                                              19


<210> 9
<211> 19
<212> RNA
<213> Artificial Sequence

<220> 
<223> one of smart pool siRNAs targeting sequences for mouse 5730419I09RIK

<400> 9
guaagagugg ucagacuaa                                              19


<210> 10
<211> 19
<212> RNA
<213> Artificial Sequence

<220> 
<223> one of smart pool siRNAs targeting sequences for mouse 5730419I09RIK

<400> 10
auacagaaau uaugccugg                                              19


<210> 11
<211> 19
<212> RNA
<213> Artificial Sequence

<220> 
<223> one of smart pool siRNAs targeting sequences for mouse 5730419I09RIK

<400> 11
gagaggaccu uccauguag                                              19


<210> 12
<211> 19
<212> RNA
<213> Artificial Sequence

<220> 
<223> one of smart pool siRNAs targeting sequences for mouse 5730419I09RIK

<400> 12
ugccauucua caaccagga                                              19


<210> 13
<211> 21
<212> DNA
<213> Artificial Sequence

<220> 
<223> scrambled siRNAs duplexes

<400> 13
cagucgcguu ugcgacuggt t                                           21


<210> 14
<211> 21
<212> DNA
<213> Artificial Sequence

<220> 
<223> scrambled siRNAs duplexes

<400> 14
ttgucagcgc aaacgcugac c                                           21

<210> 15
<211> 6
<212> PRT
<213> Artificial Sequence

<220> 
<223> PAS motif 

<220> 
<221> VARIANT        
<222> 2, 4, 5
<223> Xaa = Any Amino Acid

<220> 
<221> VARIANT        
<222> 6
<223> Xaa = Ser or Thr

<400> 15
Arg Xaa Arg Xaa Xaa Xaa
 1               5      

