                         SEQUENCE LISTING

<110>  Becton Dickinson
 
<120>  Gardnerella Vaginalis Assay

<130>  Becton 467

<140>  to be assigned
<141>  to be assigned

<150>  US 61/408840
<151>  2010-11-01

<160>  25    

<170>  PatentIn version 3.5

<210>  1
<211>  1551
<212>  DNA
<213>  Gardnerella vaginalis


<220>
<221>  source
<222>  (1)..(1551)
<223>  strain 14018 of GV vly gene

<300>
<308>  NCBI GenBank Accession No. EU522486
<309>  2008-05-19
<313>  (1)..(1551)

<400>  1
atgaagagta caaagttcta ccgtaatgca gcaatgttgc tcctcgcggg cgcaactatt       60

gttccacaat gcttagcagc accagcaatg gccgctcctt ccgctaagga ttctgaacca      120

gctacatctt gcgcagctaa gaaagactcg ttgaataatt atttgtggga tttgcaatac      180

gataaaacaa acattctcgc ccgtcatggc gaaaccattg agaacaaatt ctccagcgac      240

agcttcaaca agaacggtga attcgttgtt gttgagcatc agaagaagaa catcaccaat      300

acaacttcaa atttgtcggt tacttccgcc aacgatgatc gcgtataccc aggtgctctt      360

ttccgtgctg ataagaattt gatggacaat atgccaagcc tgatttctgc aaaccgcgct      420

ccaataacgt tgagcgttga tttgccggga ttccacggcg gcgaaagtgc tgtaactgtt      480

cagcgcccaa ccaagagctc tgtaacttcc gcagtgaacg gcttagtttc taagtggaat      540

gcacaatatg gagcaagtca tcatgttgca gctcgcatgc agtacgattc tgcaagcgca      600

caaagcatga accagctcaa ggctaagttt ggtgctgatt ttgccaagat tggtgttccg      660

ctgaagattg atttcgatgc agtacacaag ggtgagaagc agactcaaat tgtgaacttc      720

aagcaaactt actacaccgt aagcgttgat gcaccagata gcccagcaga tttctttgct      780

ccttgcacta cgccagacag cttgaagaac cgtggcgttg acaacaagcg cccaccagtt      840

tacgtgtcaa acgtagctta tggtcgctca atgtacgtaa agttcgatac caccagcaag      900

agcactgatt tccaggctgc ggtagaagca gcaattaagg gcgtagaaat caagccaaac      960

accgaattcc atcgcattct ccagaatact tctgttactg cagtgattct tggtggcagc     1020

gctaatggtg cagctaaagt tattacaggc aatatcgata cgcttaaggc tttgattcag     1080

gaaggtgcaa atttgagcac ctctagccca gcggttccaa ttgcatacac cacttccttc     1140

gtcaaggata acgaagtagc aactttgcaa tccaacagcg attatattga aacgaaggtt     1200

tcttcttatc gcaatggcta cttgactttg gaccaccgtg gagcttatgt agctcgctac     1260

tacatctact gggatgagta cggcaccgaa attgacggca ctccttacgt gcgttctcgc     1320

gcttgggaag gcaatggtaa gtatcgtaca gctcacttca acaccactat tcagttcaaa     1380

ggaaatgtac gcaatctacg aatcaagttg gttgaaaaga ctggtttggt ttgggaacca     1440

tggcgcacag tatatgaccg ttctgatttg ccactagttc gtcagcgtac tattagcaac     1500

tggggcacaa ccttgtggcc tcgcgttgct gaaactgtaa agaacgactg a              1551


<210>  2
<211>  1554
<212>  DNA
<213>  Gardnerella vaginalis


<220>
<221>  source
<222>  (1)..(1554)
<223>  T10 clone

<300>
<308>  NCBI GenBank Accession No. EU697811
<309>  2010-05-11
<313>  (1)..(1554)

<400>  2
catatgaata acacaaagtt ctaccgtaat gcagcaatgt tgctcctcgc gggcgcaact       60

attattccac aatgcttagc agcaccagca atggccgctc ctgcagctaa ggattctgag      120

ccaaccgcat cttgcgcagc caagaaggac tcgttgaata attatttgtg ggatttgcaa      180

tacgataaaa caaacattct cgcccgtcat ggcgaaacca ttgacaacaa attctctagc      240

gatagcttca acaagggcga tgaattcgtt gttgttgagc atcagaagaa gaacatcaca      300

aatacaactt caaacttgtc ggttacttcc gccaacgatg atcgcgtata cccaggtgct      360

cttttccgcg ctgaccagaa tttgatggac aatatgccaa gcctgatttc cgcaaaccgc      420

gctccaatca cgttgagcgt tgatttgcca ggcttccacg gcggcgaaag tgctgtaact      480

gttcagcgcc caaccaagag ctctgtaact tccgcagtga acggcttagt ttccaagtgg      540

aatgcacagt acgctgcaag ccatcatgtt gcagctcgca tgcagtacga ttctgcaagc      600

gcacaaagca tgaaccagct caaggcaaag tttggtgctg atttcgccaa gattggcgtt      660

ccgctgaaga ttgatttcga cgctgtgcac aagggcgaaa agcagactca aattgtgaac      720

ttcaagcaga cctactacac cgtaagtgtt gatgctccag atagcccagc tgacttcttc      780

gcaccatgca ctacgccaga aagcttgaag agccgcggag tagacagcaa gcgtccgcca      840

gtatatgtgt ccaacgtagc ttacggccgt tcaatgtacg taaagttcga cacccgcagc      900

aagagcaccg atttccaggc tgctgttgaa gctgcaatca agggtgttga aatcaagcca      960

aataccgagt tccaccgcat tttgcagaac acttctgtaa ctgctgtaat tctcggcggc     1020

agcgcagacg gtgcagccaa ggttattacc ggcaacgtcg acacgttgaa ggctttgatt     1080

caagaaggcg caaatttgag cacctccagc ccagcagttc cagttgctta caccacttcc     1140

ttcgccaagg ataacgaagt agcaactttg caaaccaata gcgattacgt tgaaaccaag     1200

gtttcttcct accgcgacgg ctacttgact ttggatcacc gtggagctta cgtagctcgc     1260

tactacatct actgggatga gtacggcacc gaaattgacg gcactcctta cgtgcgttct     1320

cgcgcttggg aaggcaatgg caagtatcgt acagctcact tcaacaccac tattcagttc     1380

aaaggaaatg tacacaatct acgaaccaag ctggttgaaa agactggctt agtttgggaa     1440

ccatggcgta cagtatatga ccgttccgat ttgccactgg ttcgccagcg cacaatcaag     1500

aactggggca caaccttgtg gccacgcgtt gctgaaactg taaagaacga ctaa           1554


<210>  3
<211>  16
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  3
aatatgccaa gcctga                                                       16


<210>  4
<211>  16
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  4
gcaaatcaac gctcaa                                                       16


<210>  5
<211>  16
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Probe

<400>  5
gcaaaccgcg ctccaa                                                       16


<210>  6
<211>  15
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  6
gtatacccag gtgct                                                        15


<210>  7
<211>  15
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  7
gcgctgaaca gttac                                                        15


<210>  8
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  8
ggcggcgaaa gtgctgta                                                     18


<210>  9
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  9
agccgttcac tgcggaagt                                                    19


<210>  10
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Probe

<400>  10
ttcagcgccc aaccaagagc tctgt                                             25


<210>  11
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  11
gccaacgatg atcgcgtat                                                    19


<210>  12
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  12
caggcttggc atattgtcca t                                                 21


<210>  13
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Probe

<400>  13
cccaggtgct cttttcgctg ctga                                              24


<210>  14
<211>  15
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  14
gtatacccag gtgct                                                        15


<210>  15
<211>  40
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  15
accgcatcga atgcatgtct cgggaatatg ccaagcctga                             40


<210>  16
<211>  15
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  16
gcgctgaaca gttac                                                        15


<210>  17
<211>  40
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  17
cgattccgct ccagacttct cggggcaaat caacgctcaa                             40


<210>  18
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Probe

<400>  18
tccccgagtg caaaccgcgc tccaa                                             25


<210>  19
<211>  144
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Internal Amplification Control sample

<400>  19
gtatacccag gtgctctttt ccgtgctgat aagaatttga tggacaatat gccaagcctg       60

atttctgcag tccgccacta tctaacgttg agcgttgatt tgccgggatt ccacggcggc      120

gaaagtgctg taactgttca gcgc                                             144


<210>  20
<211>  196
<212>  DNA
<213>  Gardnerella vaginalis

<400>  20
gccaacgatg atcgcgtata cccaggtgct cttttccgtg ctgataagaa tttgatggac       60

aatatgccaa gcctgatttc tgcaaaccgc gctccaataa cgttgagcgt tgatttgccg      120

ggattccacg gcggcgaaag tgctgtaact gttcagcgcc caaccaagag ctctgtaact      180

tccgcagtga acggct                                                      196


<210>  21
<211>  196
<212>  DNA
<213>  Gardnerella vaginalis

<400>  21
gccaacgatg atcgcgtata cccaggtgct cttttccgcg ctgaccagaa tttgatggac       60

aatatgccaa gcctgatttc cgcaaaccgc gctccaatca cgttgagcgt tgatttgcca      120

gcattccacg gcggcgaaag tgctgtaact gttcagcgcc caaccaagag ctctgtaact      180

tccgcagtga acggct                                                      196


<210>  22
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Probe

<400>  22
tccccgagtg cagtccgcca ctatc                                             25


<210>  23
<211>  1551
<212>  DNA
<213>  Gardnerella vaginalis


<220>
<221>  source
<222>  (1)..(1551)
<223>  strain 14019 of GV vly gene

<300>
<308>  NCBI GenBank Accession No. EU522487
<309>  2008-05-19
<313>  (1)..(1551)

<400>  23
atgaagagta caaagttcta ccgtaatgca gcaatgttgc tcctcgcggg cgcaactatt       60

gttccacaat gcttagcagc accagcaatg gccgctcctt ccgctaagga ttctgaacca      120

gctacatctt gcgcagctaa gaaagactcg ttgaataatt atttgtggga tttgcaatac      180

gataaaacaa acattctcgc ccgtcatggc gaaaccattg agaacaaatt ctccagcgac      240

agcttcaaca agaacggtga attcgttgtt gttgagcatc agaagaagaa catcaccaat      300

acaacttcaa atttgtcggt tacttccgcc aacgatgatc gcgtataccc aggtgctctt      360

ttccgtgctg ataagaattt gatggacaat atgccaagcc tgatttctgc aaaccgcgct      420

ccaataacgt tgagcgttga tttgccggga ttccacggcg gcgaaagtgc tgtaactgtt      480

cagcgcccaa ccaagagctc tgtaacttcc gcagtgaacg gcttagtttc taagtggaat      540

gcacaatatg gagcaagtca tcatgttgca gctcgcatgc agtacgattc tgcaagcgca      600

caaagcatga accagctcaa ggctaagttt ggtgctgatt ttgccaagat tggtgttccg      660

ctgaagattg atttcgatgc agtacacaag ggtgagaagc agactcaaat tgtgaacttc      720

aagcaaactt actacaccgt aagcgttgat gcaccagata gcccagcaga tttctttgct      780

ccttgcacta cgccagacag cttgaagaac cgtggcgttg acaacaagcg cccaccagtt      840

tacgtgtcaa acgtagctta tggtcgctca atgtacgtaa agttcgatac caccagcaag      900

agcactgatt tccaggctgc ggtagaagca gcaattaagg gcgtagaaat caagccaaac      960

accgaattcc atcgcattct ccagaatact tctgttactg cagtgattct tggtggcagc     1020

gctaatggtg cagctaaagt tattacaggc aatatcgata cgcttaaggc tttgattcag     1080

gaaggtgcaa atttgagcac ctctagccca gcggttccaa ttgcatacac cacttccttc     1140

gtcaaggata acgaagtagc aactttgcaa tccaacagcg attatattga aacgaaggtt     1200

tcttcttatc gcaatggcta cttgactttg gaccaccgtg gagcttatgt agctcgctac     1260

tacatctact gggatgagta cggcaccgaa attgacggca ctccttacgt gcgttctcgc     1320

gcttgggaag gcaatggtaa gtatcgtaca gctcacttca acaccactat tcagttcaaa     1380

ggaaatgtac gcaatctacg aatcaagttg gttgaaaaga ctggtttggt ttgggaacca     1440

tggcgcacag tatatgaccg ttctgatttg ccactagttc gtcagcgtac tattagcaac     1500

tggggcacaa ccttgtggcc tcgcgttgct gaaactgtaa agaacgactg a              1551


<210>  24
<211>  1551
<212>  DNA
<213>  Gardnerella vaginalis


<220>
<221>  source
<222>  (1)..(1551)
<223>  strain 49145 of GV vly gene

<300>
<308>  NCBI GenBank Accession No. EU522488
<309>  2008-05-19
<313>  (1)..(1551)

<400>  24
atgaagagta caaagttcta ccgtaatgca gcaatgttgc tcctcgcggg cgcaactatt       60

gttccacaat gcttagcagc accagcaatg gccgctcctt ccgctaagga ttctgaacca      120

gctacatctt gcgcagctaa gaaagactcg ttgaataatt atttgtggga tttgcaatac      180

gataaaacaa acattctcgc ccgtcatggc gaaaccattg agaacaaatt ctccagcgac      240

agcttcaaca agaacggtga attcgttgtt gttgagcatc agaagaagaa catcaccaat      300

acaacttcaa atttgtcggt tacttccgcc aacgatgatc gcgtataccc aggtgctctt      360

ttccgtgctg ataagaattt gatggacaat atgccaagcc tgatttctgc aaaccgcgct      420

ccaataacgt tgagcgttga tttgccggga ttccacggcg gcgaaagtgc tgtaactgtt      480

cagcgcccaa ccaagagctc tgtaacttcc gcagtgaacg gcttagtttc taagtggaat      540

gcacaatatg gagcaagtca tcatgttgca gctcgcatgc agtacgattc tgcaagcgca      600

caaagcatga accagctcaa ggctaagttt ggtgctgatt ttgccaagat tggtgttccg      660

ctgaagattg atttcgatgc agtacacaag ggtgagaagc agactcaaat tgtgaacttc      720

aagcaaactt actacaccgt aagcgttgat gcaccagata gcccagcaga tttctttgct      780

ccttgcacta cgccagacag cttgaagaac cgtggcgttg acaacaagcg cccaccagtt      840

tacgtgtcaa acgtagctta tggtcgctca atgtacgtaa agttcgatac caccagcaag      900

agcactgatt tccaggctgc agtagaagca gcaattaagg gcgtagaaat caagccaaac      960

accgaattcc atcgcattct ccaaaatact tctgttactg cagtgattct tggtggcagc     1020

gctaatggtg cagctaaagt tattacaggc aacatcgata cgttgaaggc tttgattcag     1080

gaaggtgcaa atttgagcac ctctagccca gcagttccaa ttgcatacac cacttccttc     1140

gtcaaggata acgaagtagc aactttgcaa tccaacagcg attatattga aacgaaggtt     1200

tcctcttacc gcaatggcta cttgactttg gaccaccgtg gagcttacgt agctcgctac     1260

tacatctact gggatgagta cggcaccgaa attgacggca ctccttacgt gcgttctcgc     1320

gcttgggaag gcaatggtaa gtatcgtaca gctcacttca ataccactat tcagttcaaa     1380

ggaaatgtac gcaatctacg aatcaagttg gttgaaaaga ctggtttagt ttgggaacca     1440

tggcgcacag tatatgaccg ttctgatttg ccactagttc atcagcgtac tattagcaac     1500

tggggcacaa ccttgtggcc tcgcgttgct gaaactgtaa agaacgactg a              1551


<210>  25
<211>  1554
<212>  DNA
<213>  Gardnerella vaginalis


<220>
<221>  source
<222>  (1)..(1554)
<223>  T11 clone

<300>
<308>  NCBI GenBank Accession No. EU697812
<309>  2010-05-11
<313>  (1)..(1554)

<400>  25
catatgaata acacaaagtt ctaccgtaat gcagcaatgt tgctcctcgc gggcgcaact       60

attattccac aatgcttagc agcaccagca atggccgctc ctgcagctaa ggattctgag      120

ccaaccgcat cttgcgcagc caagaaggac tcgttgaata attatttgtg ggatttgcaa      180

tacgataaaa caaacattct cgcccgtcat ggcgaaacca ttgacaacaa attctctagc      240

gatagcttca acaagggcga tgaattcgtt gttgttgagc atcagaagaa gaacatcaca      300

aatacaactt caaacttgtc ggttacttcc gccaacgatg atcgcgtata cccaggtgct      360

cttttccgcg ctgaccagaa tttgatggac aatatgccaa gcctgatttc cgcaaaccgc      420

gctccaatca cgttgagcgt tgatttgcca ggcttccacg gcggcgaaag tgctgtaact      480

gttcagcgcc caaccaagag ctctgtaact tccgcagtga acggcttagt ttccaagtgg      540

aatgcacagt acgctgcaag ccatcatgtt gcagctcgca tgcagtacga ttctgcaagc      600

gcacaaagca tgagccagct caaggcaaag tttggtgctg atttcgccaa gattggcgtt      660

ccgctgaaga ttgatttcga cgctgtgcac aagggcgaaa agcagactca aattgtgaac      720

ttcaagcaga cctactacac cgtaagtgtt gatgctccag atagcccagc tgacttcttc      780

gcaccatgca ctacgccaga aagcttgaag agccgcggag tagacagcaa gcgtccgcca      840

gtatatgtgt ccaacgtagc ttacggccgt tcaatgtacg taaagttcga cacccgcagc      900

aagagcaccg atttccaggc tgctgttgaa gctgcaatca agggtgttga aatcaagcca      960

aataccgagt tccaccgcat tttgcagaac acttctgtaa ctgctgtaat tctcggcggc     1020

agcgcaaacg gtgcagccaa ggttattacc ggcaacgtcg acacgttgaa ggctttgatt     1080

caagaaggcg caaatttgag cacctccagc ccagcagttc caattgctta caccacttcc     1140

ttcgtcaagg ataacgaagt agcaactttg caaaccaata gcgattacgt tgagaccaag     1200

gtttcttcct accgcgacgg ctacttgact ttggatcacc gtggagctta cgtagctcgc     1260

tactacatct actgggatga gtacggcacc gaaattgacg gcactcctta cgtgcgttct     1320

cgcgcttggg aaggcaatgg caagtatcgt acagctcact tcaacaccac tattcagttc     1380

aaaggaaatg tacacaatct acgaatcaag ctggttgaaa agactggctt agtttgggaa     1440

ccatggcgta cagtatatga ccgttccgat ttgccactgg ttcgccagcg cacaatcaag     1500

aactggggca caaccttgtg gccacgcgtt gctgaaactg taaagaacga ctaa           1554


