                         SEQUENCE LISTING

<110>  The Translational Genomics Research Institute
       Weiss, Glen
       Xia, Xueliang
 
<120>  METHODS AND KITS TO ANALYZE MICRORNA BY NUCLEIC ACID SEQUENCING

<130>  063608-miRNASeq

<150>  US 61/347,202
<151>  2010-05-21

<160>  58    

<170>  PatentIn version 3.5

<210>  1
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This sequence is in the 5' to 3' orientation

<400>  1
ccgcgtactg gaagatttgc gcatttttat c                                      31


<210>  2
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This sequence is in the 5' to 3' orientation

<400>  2
ccgcgtactg gaagatttgc gcatttttat c                                      31


<210>  3
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This sequence is in the 5' to 3' orientation

<400>  3
ccgcgtactg gaagatttgc c                                                 21


<210>  4
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This sequence is in the 5' to 3' orientation

<400>  4
ccgcgtactg gaagatttgc c                                                 21


<210>  5
<211>  44
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This sequence is in the 5' to 3' orientation; reverse 
       transcription primers wherein V is A or C or G and N is A or C


<220>
<221>  misc_feature
<222>  (44)..(44)
<223>  n is a, c, g, or t

<400>  5
ttataagtat gcgcattaaa atagtcacgc tttttttttt ttvn                        44


<210>  6
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This sequence is in the 5' to 3' orientation; reverse 
       transcription primers wherein V is A or C or G, and N is A or C


<220>
<221>  misc_feature
<222>  (34)..(34)
<223>  n is a, c, g, or t

<400>  6
ttataagtat gcgcattaac tttttttttt ttvn                                   34


<210>  7
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This sequence is in the 5' to 3' orientation; forward primer

<400>  7
atctccgcgt actggaagat ttgc                                              24


<210>  8
<211>  78
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This sequence is in the 5' to 3' orientation; forward primer

<400>  8
aatgatacgg cgaccaccga gatctacact ctttccctac acgacgctct tccgatctcc       60

gcgtactgga agatttgc                                                     78


<210>  9
<211>  17
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This sequence is in the 5' to 3' orientation; reverse primer

<400>  9
aatgcgcata cttataa                                                      17


<210>  10
<211>  81
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This sequence is in the 5' to 3' orientation, reverse primer

<400>  10
caagcagaag acggcatacg agatcggtct cggcattcct gctgaaccgc tcttccgatc       60

tgttaatgcg catacttata a                                                 81


<210>  11
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  These are barcode sequences

<400>  11
agagat                                                                   6


<210>  12
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  These are barcode sequences

<400>  12
catgct                                                                   6


<210>  13
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  These are barcode sequences

<400>  13
cgcgct                                                                   6


<210>  14
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  These are barcode sequences

<400>  14
gccggt                                                                   6


<210>  15
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  These are barcode sequences

<400>  15
gctagt                                                                   6


<210>  16
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  These are barcode sequences

<400>  16
ccggct                                                                   6


<210>  17
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  These are barcode sequences

<400>  17
ggaagt                                                                   6


<210>  18
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  These are barcode sequences

<400>  18
gactgt                                                                   6


<210>  19
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  These are barcode sequences

<400>  19
gagagt                                                                   6


<210>  20
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  20
cggcct                                                                   6


<210>  21
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  21
ccaact                                                                   6


<210>  22
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  22
accaat                                                                   6


<210>  23
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  23
cacact                                                                   6


<210>  24
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  24
gaaggt                                                                   6


<210>  25
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  25
gggggg                                                                   6


<210>  26
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  26
cgtact                                                                   6


<210>  27
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  27
cagtct                                                                   6


<210>  28
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  28
aggaat                                                                   6


<210>  29
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  29
actgat                                                                   6


<210>  30
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  30
acgtat                                                                   6


<210>  31
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  31
tacgtt                                                                   6


<210>  32
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  32
ccttct                                                                   6


<210>  33
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  33
gatcgt                                                                   6


<210>  34
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  34
gcatgt                                                                   6


<210>  35
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  35
aaccat                                                                   6


<210>  36
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  36
ccccct                                                                   6


<210>  37
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  37
cgatct                                                                   6


<210>  38
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  38
tcgatt                                                                   6


<210>  39
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  39
tgcatt                                                                   6


<210>  40
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  40
caacct                                                                   6


<210>  41
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  41
ggttgt                                                                   6


<210>  42
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  42
aaggat                                                                   6


<210>  43
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  43
agctat                                                                   6


<210>  44
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  44
aaaaat                                                                   6


<210>  45
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  45
acacat                                                                   6


<210>  46
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  46
aattat                                                                   6


<210>  47
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  47
tctctt                                                                   6


<210>  48
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  48
tcagtt                                                                   6


<210>  49
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  49
tatatt                                                                   6


<210>  50
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  50
agtcat                                                                   6


<210>  51
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  51
tagctt                                                                   6


<210>  52
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  52
tgtgtt                                                                   6


<210>  53
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  53
tggttt                                                                   6


<210>  54
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  54
taattt                                                                   6


<210>  55
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  55
tccttt                                                                   6


<210>  56
<211>  6
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This is a barcode sequence

<400>  56
tgactt                                                                   6


<210>  57
<211>  76
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This sequence is in the 5' to 3' orientation; forward primer 
       wherein N is the location of the miRNA


<220>
<221>  misc_feature
<222>  (41)..(64)
<223>  n is a, c, g, or t

<400>  57
taatacgact cactataggg cgatcgtcac cgtgtacaaa nnnnnnnnnn nnnnnnnnnn       60

nnnnaaaaaa aaaaaa                                                       76


<210>  58
<211>  76
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  This sequence is in the 5' to 3' orientation; reverse primer 
       wherein N is the location of the miRNA


<220>
<221>  misc_feature
<222>  (43)..(66)
<223>  n is a, c, g, or t

<400>  58
tcggcctgcc tgaaagcgtg gtgatttccg tttttttttt ttnnnnnnnn nnnnnnnnnn       60

nnnnnntttg tacacg                                                       76


