                         SEQUENCE LISTING

<110>  Karolinska Institutet Innovations AB
       Jonsson, Ann-Beth
       Wehelie, Rahma
 
<120>  COMPOUNDS, MEDICAMENTS AND METHODS OF TREATMENT FOR HELICOBACTER 
       PYLORI INFECTION

<130>  P223660PCT00

<150>  1050450-4
<151>  2010-05-06

<160>  40    

<170>  PatentIn version 3.5

<210>  1
<211>  293
<212>  PRT
<213>  Homo sapiens


<220>
<221>  SITE
<222>  (128)..(151)
<223>  P3

<220>
<221>  SITE
<222>  (133)..(144)
<223>  Xb

<220>
<221>  SITE
<222>  (148)..(151)
<223>  ZB

<220>
<221>  SITE
<222>  (190)..(216)
<223>  P4

<400>  1

Cys Glu Glu Pro Pro Thr Phe Glu Ala Met Glu Leu Ile Gly Lys Pro 
1               5                   10                  15      


Lys Pro Tyr Tyr Glu Ile Gly Glu Arg Val Asp Tyr Lys Cys Lys Lys 
            20                  25                  30          


Gly Tyr Phe Tyr Ile Pro Pro Leu Ala Thr His Thr Ile Cys Asp Arg 
        35                  40                  45              


Asn His Thr Trp Leu Pro Val Ser Asp Asp Ala Cys Tyr Arg Glu Thr 
    50                  55                  60                  


Cys Pro Tyr Ile Arg Asp Pro Leu Asn Gly Gln Ala Val Pro Ala Asn 
65                  70                  75                  80  


Gly Thr Tyr Glu Phe Gly Tyr Gln Met His Phe Ile Cys Asn Glu Gly 
                85                  90                  95      


Tyr Tyr Leu Ile Gly Glu Glu Ile Leu Tyr Cys Glu Leu Lys Gly Ser 
            100                 105                 110         


Val Ala Ile Trp Ser Gly Lys Pro Pro Ile Cys Glu Lys Val Leu Cys 
        115                 120                 125             


Thr Pro Pro Pro Lys Ile Lys Asn Gly Lys His Thr Phe Ser Glu Val 
    130                 135                 140                 


Glu Val Phe Glu Tyr Leu Asp Ala Val Thr Tyr Ser Cys Asp Pro Ala 
145                 150                 155                 160 


Pro Gly Pro Asp Pro Phe Ser Leu Ile Gly Glu Ser Thr Ile Tyr Cys 
                165                 170                 175     


Gly Asp Asn Ser Val Trp Ser Arg Ala Ala Pro Glu Cys Lys Val Val 
            180                 185                 190         


Lys Cys Arg Phe Pro Val Val Glu Asn Gly Lys Gln Ile Ser Gly Phe 
        195                 200                 205             


Gly Lys Lys Phe Tyr Tyr Lys Ala Thr Val Met Phe Glu Cys Asp Lys 
    210                 215                 220                 


Gly Phe Tyr Leu Asp Gly Ser Asp Thr Ile Val Cys Asp Ser Asn Ser 
225                 230                 235                 240 


Thr Trp Asp Pro Pro Val Pro Lys Cys Leu Lys Val Ser Thr Ser Ser 
                245                 250                 255     


Thr Thr Lys Ser Pro Ala Ser Ser Ala Ser Gly Pro Arg Pro Thr Tyr 
            260                 265                 270         


Lys Pro Pro Val Ser Asn Tyr Pro Gly Tyr Pro Lys Pro Glu Glu Gly 
        275                 280                 285             


Ile Leu Asp Ser Leu 
    290             


<210>  2
<211>  24
<212>  DNA
<213>  Homo sapiens

<400>  2
cacctgtgag gagccaccaa catt                                              24


<210>  3
<211>  27
<212>  DNA
<213>  Homo sapiens

<400>  3
atccaaactg tcaagtattc cttcctc                                           27


<210>  4
<211>  39
<212>  DNA
<213>  artificial

<220>
<223>  Synthetic primer

<400>  4
cactacgctg gaaaatcagt aagttggcag catcacccg                              39


<210>  5
<211>  36
<212>  DNA
<213>  Artificial

<220>
<223>  Synthetic primer

<400>  5
tttagcacca tgccaggcgt ttaagggcac caataa                                 36


<210>  6
<211>  22
<212>  DNA
<213>  Helicobacter pylori

<400>  6
ttggcgctgg ggtttctaat gt                                                22


<210>  7
<211>  38
<212>  DNA
<213>  Helicobacter pylori

<400>  7
acttatactg attttccagc gtagtggagc atcaactt                               38


<210>  8
<211>  36
<212>  DNA
<213>  Helicobacter pylori

<400>  8
cttaaacgcc tggcatggtg ctaaaagcat gacaac                                 36


<210>  9
<211>  22
<212>  DNA
<213>  Helicobacter pylori

<400>  9
cgcttgcaaa agctgtaggg at                                                22


<210>  10
<211>  38
<212>  DNA
<213>  Artificial

<220>
<223>  Synthetic primer

<400>  10
gcctgccgtt ttgtattagt gacctgtaga attcgagc                               38


<210>  11
<211>  39
<212>  DNA
<213>  Artificial

<220>
<223>  Synthetic primer

<400>  11
accgccttgg tgttagaaaa actcatcgag catcaaatg                              39


<210>  12
<211>  24
<212>  DNA
<213>  Helicobacter pylori

<400>  12
atcactgctc atgggtttaa tgcg                                              24


<210>  13
<211>  37
<212>  DNA
<213>  Helicobacter pylori

<400>  13
ggtcactaat acaaaacggc aggcgcttta aaatcgg                                37


<210>  14
<211>  37
<212>  DNA
<213>  Helicobacter pylori

<400>  14
tgagtttttc taacaccaag gcgttgcaga gtatctt                                37


<210>  15
<211>  24
<212>  DNA
<213>  Helicobacter pylori

<400>  15
catttttctg tccaaattaa accg                                              24


<210>  16
<211>  25
<212>  DNA
<213>  Helicobacter pylori

<400>  16
ccacaaaggt taccacaaga tcagg                                             25


<210>  17
<211>  26
<212>  DNA
<213>  Helicobacter pylori

<400>  17
cagcaatcac tgagcgtttt ttaagg                                            26


<210>  18
<211>  24
<212>  PRT
<213>  Homo sapiens

<400>  18

Cys Thr Pro Pro Pro Lys Ile Lys Asn Gly Lys His Thr Phe Ser Glu 
1               5                   10                  15      


Val Glu Val Phe Glu Tyr Leu Asp 
            20                  


<210>  19
<211>  27
<212>  PRT
<213>  Homo sapiens

<400>  19

Lys Val Val Lys Cys Arg Phe Pro Val Val Glu Asn Gly Lys Gln Ile 
1               5                   10                  15      


Ser Gly Phe Gly Lys Lys Phe Tyr Tyr Lys Ala 
            20                  25          


<210>  20
<211>  4
<212>  PRT
<213>  Homo sapiens

<400>  20

Glu Tyr Leu Asp 
1               


<210>  21
<211>  12
<212>  PRT
<213>  Homo sapiens

<400>  21

Lys Ile Lys Asn Gly Lys His Thr Phe Ser Glu Val 
1               5                   10          


<210>  22
<211>  25
<212>  PRT
<213>  Homo sapiens

<400>  22

Leu Cys Thr Pro Pro Pro Lys Ile Lys Asn Gly Lys His Thr Phe Ser 
1               5                   10                  15      


Glu Val Glu Val Phe Glu Tyr Leu Asp 
            20                  25  


<210>  23
<211>  12
<212>  PRT
<213>  Homo sapiens

<400>  23

Leu Cys Thr Pro Pro Pro Lys Ile Lys Asn Gly Lys 
1               5                   10          


<210>  24
<211>  14
<212>  PRT
<213>  Homo sapiens

<400>  24

Lys Ile Lys Asn Gly Lys His Thr Phe Ser Glu Val Glu Val 
1               5                   10                  


<210>  25
<211>  13
<212>  PRT
<213>  Homo sapiens

<400>  25

His Thr Phe Ser Glu Val Glu Val Phe Glu Tyr Leu Asp 
1               5                   10              


<210>  26
<211>  15
<212>  PRT
<213>  Homo sapiens

<400>  26

Leu Cys Thr Pro Pro Pro Lys Ile Lys Asn Gly Lys His Thr Phe 
1               5                   10                  15  


<210>  27
<211>  21
<212>  PRT
<213>  Homo sapiens

<400>  27

Leu Cys Thr Pro Pro Pro Lys Ile Lys Asn Gly Lys His Thr Phe Ser 
1               5                   10                  15      


Glu Val Glu Val Phe 
            20      


<210>  28
<211>  18
<212>  PRT
<213>  Homo sapiens

<400>  28

Leu Cys Thr Pro Pro Pro Lys Ile Lys Asn Gly Lys His Thr Phe Ser 
1               5                   10                  15      


Glu Val 
        


<210>  29
<211>  22
<212>  PRT
<213>  Homo sapiens

<400>  29

Pro Pro Pro Lys Ile Lys Asn Gly Lys His Thr Phe Ser Glu Val Glu 
1               5                   10                  15      


Val Phe Glu Tyr Leu Asp 
            20          


<210>  30
<211>  19
<212>  PRT
<213>  Homo sapiens

<400>  30

Lys Ile Lys Asn Gly Lys His Thr Phe Ser Glu Val Glu Val Phe Glu 
1               5                   10                  15      


Tyr Leu Asp 
            


<210>  31
<211>  16
<212>  PRT
<213>  Homo sapiens

<400>  31

Asn Gly Lys His Thr Phe Ser Glu Val Glu Val Phe Glu Tyr Leu Asp 
1               5                   10                  15      


<210>  32
<211>  25
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Random peptide

<400>  32

Leu Thr Pro Cys Pro Lys Pro Lys Asn Ile Gly Thr His Lys Phe Val 
1               5                   10                  15      


Glu Ser Val Glu Phe Tyr Leu Glu Asp 
            20                  25  


<210>  33
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer

<400>  33
gggcaccaat aaccgctgat tgagtggaaa gcat                                   34


<210>  34
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer

<400>  34
aagatactct gcaacgcctt ggtg                                              24


<210>  35
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer

<400>  35
atcactgctc atgggtttaa tgcg                                              24


<210>  36
<211>  37
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer

<400>  36
acttactgat tttcctaaaa cggcaggcgc tttaaaa                                37


<210>  37
<211>  39
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer

<400>  37
gccgttttag gaaaatcagt aagttggcag catcacccg                              39


<210>  38
<211>  36
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer

<400>  38
ctcaatcagc ggttattggt gcccttaaac gcctgg                                 36


<210>  39
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer

<400>  39
ccatatgtta gttacaaaac ttgcc                                             25


<210>  40
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer

<400>  40
ctcgagaagc ttaatggaat tttc                                              24


