                         SEQUENCE LISTING

<110>  CHECK-POINTS HOLDING B.V.
 
<120>  ASSAYS, COMPOSITIONS AND METHODS FOR DETECTING DRUG RESISTANT 
       MICRO-ORGANISMS

<130>  CHE-006-PCT

<150>  PCT/EP2010/056122
<151>  2010-05-05

<150>  PCT/EP2010/059105
<151>  2010-06-25

<160>  85    

<170>  PatentIn version 3.5

<210>  1
<211>  27
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: TEM-104E

<400>  1
tacactattc tcagaatgac ttggttg                                           27


<210>  2
<211>  27
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: TEM-104E

<400>  2
agtactcacc agtcacagaa aagcatc                                           27


<210>  3
<211>  27
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: TEM-104K

<400>  3
tacactattc tcagaatgac ttggtta                                           27


<210>  4
<211>  23
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: TEM-164R

<400>  4
ggatcatgta actcgccttg atc                                               23


<210>  5
<211>  24
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: TEM-164R

<400>  5
gttgggaacc ggagctgaat gaag                                              24


<210>  6
<211>  23
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: TEM-164S

<400>  6
ggatcatgta actcgccttg ata                                               23


<210>  7
<211>  23
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: TEM-164C

<400>  7
ggatcatgta actcgccttg att                                               23


<210>  8
<211>  99
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-M2

<400>  8
gatatcgcgg ttatctggcc ggaaaaccac gcaccgctgg ttctggtgac ctactttacc       60

caaccggagc agaaggcgga aagccgtcgg gatattctg                              99


<210>  9
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-M1

<400>  9
ctatggcacc accaacgata tcgcggtgat ctggccaaaa gatcgtgcgc cgctgattct       60

ggtcacttac ttcacccagc ctcaacctaa ggcagaaagc                            100


<210>  10
<211>  24
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: TEM-164H

<400>  10
attgggaacc ggagctgaat gaag                                              24


<210>  11
<211>  23
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: TEM-84I

<400>  11
atgtggcgcg gtattatccc gta                                               23


<210>  12
<211>  22
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: TEM-84I

<400>  12
ttgacgccgg gcaagagcaa ct                                                22


<210>  13
<211>  23
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: TEM-100S

<400>  13
cgccgcatac actattctca gag                                               23


<210>  14
<211>  23
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: TEM-100S

<400>  14
tgacttggtt gagtactcac cag                                               23


<210>  15
<211>  24
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: TEM-238G

<400>  15
gataccgcga gatccacgct cacc                                              24


<210>  16
<211>  26
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: TEM-238G

<400>  16
ggctccagat ttatcagcaa taaacc                                            26


<210>  17
<211>  24
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: TEM-238S

<400>  17
gataccgcga gatccacgct cact                                              24


<210>  18
<211>  21
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: SHV-130S

<400>  18
gtgccgccgc cattaccgtg a                                                 21


<210>  19
<211>  23
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: SHV-130S

<400>  19
gcgataacag cgccgccaat ctg                                               23


<210>  20
<211>  18
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: SHV-238G

<400>  20
cgcgcgcacc ccgttygc                                                     18


<210>  21
<211>  23
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: SHV-238G

<400>  21
cagctccggt cttatcggcg ata                                               23


<210>  22
<211>  23
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: SHV-238S

<400>  22
tagctccggt cttatcggcg ata                                               23


<210>  23
<211>  18
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: SHV-238A

<400>  23
cgcgcgcacc ccgttygg                                                     18


<210>  24
<211>  17
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: SHV-240E

<400>  24
ccgcgcgcac cccgttc                                                      17


<210>  25
<211>  20
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: SHV-240E

<400>  25
gcyagctccg gtcttatcgg                                                   20


<210>  26
<211>  17
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: SHV-240K

<400>  26
ccgcgcgcac cccgttt                                                      17


<210>  27
<211>  19
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: SHV-179D

<400>  27
ttcccggcga cgcccgcga                                                    19


<210>  28
<211>  22
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: SHV-179D

<400>  28
caccactacc ccggccagca tg                                                22


<210>  29
<211>  19
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: SHV-179A

<400>  29
ttcccggcga cgcccgcgc                                                    19


<210>  30
<211>  19
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: SHV-179G

<400>  30
ttcccggcga cgcccgcgg                                                    19


<210>  31
<211>  19
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: SHV-179N

<400>  31
ttcccggcga cgcccgcaa                                                    19


<210>  32
<211>  24
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-M1

<400>  32
gatgtcactg gctgagctta gcgc                                              24


<210>  33
<211>  23
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-M1

<400>  33
ggccgcgcta cagtacagcg ata                                               23


<210>  34
<211>  23
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-M2

<400>  34
ggcggtgctt aaacagagcg aga                                               23


<210>  35
<211>  25
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-M2

<400>  35
gcgataagca cctgctaaat cagcg                                             25


<210>  36
<211>  21
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-M9

<400>  36
tgcgccgctg gttctggtga c                                                 21


<210>  37
<211>  26
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-M9

<400>  37
ctattttacc cagccgcaac agaacg                                            26


<210>  38
<211>  22
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-M8&25

<400>  38
gggwgtggcg ttgattgaca cc                                                22


<210>  39
<211>  23
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-M8&25

<400>  39
gccgataacg cgcagacgct cta                                               23


<210>  40
<211>  16
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: TEM-F

<400>  40
gcggaacccc tatttg                                                       16


<210>  41
<211>  20
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: TEM-R

<400>  41
accaatgctt aatcagtgag                                                   20


<210>  42
<211>  18
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: SHV-F1

<400>  42
ctttactcgc ctttatcg                                                     18


<210>  43
<211>  19
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: SHV-R1

<400>  43
tcccgcagat aaatcacca                                                    19


<210>  44
<211>  26
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-M-F

<400>  44
atgtgcagya ccagtaargt katggc                                            26


<210>  45
<211>  29
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-M-R

<400>  45
tgggtraart argtsaccag aaysagcgg                                         29


<210>  46
<211>  20
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-M-10-1F

<400>  46
atggttaaaa aatcactgcg                                                   20


<210>  47
<211>  17
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-M-10-4R

<400>  47
aaaccgttgg tgacgat                                                      17


<210>  48
<211>  20
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-M-2F

<400>  48
atgatgactc agagcattcg                                                   20


<210>  49
<211>  20
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-M-2R

<400>  49
ttattgcatc agaaaccgtg                                                   20


<210>  50
<211>  20
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-Mgp8-F

<400>  50
tgatgagaca tcgcgttaag                                                   20


<210>  51
<211>  20
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-Mgp8-R

<400>  51
taaccgtcgg tgacgatttt                                                   20


<210>  52
<211>  22
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-M-9-1F

<400>  52
tggtgacaaa gagagtgcaa cg                                                22


<210>  53
<211>  18
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-M-9-MF

<400>  53
ggaggcgtga cggctttt                                                     18


<210>  54
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: TEM wild type 104

<400>  54
gcaagagcaa ctcggtcgcc gcatacacta ttctcagaat gacttggttg agtactcacc       60

agtcacagaa aagcatctta cggatggcat gacagtaaga                            100


<210>  55
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: TEM wild type 164

<400>  55
gctaaccgct tttttgcaca acatggggga tcatgtaact cgccttgatc gttgggaacc       60

ggagctgaat gaagccatac caaacgacga gcgtgacacc                            100


<210>  56
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: TEM wild type 238

<400>  56
ttaccatctg gccccagtgc tgcaatgata ccgcgagacc cacgctcacc ggctccagat       60

ttatcagcaa taaaccagcc agccggaagg gccgagcgca                            100


<210>  57
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: SHV wild type 238/240

<400>  57
gggccaagca gggcgacaat gccgcgcgca ccccgctcgc cagctccggt cttatcggcg       60

ataaaccagc ccgccggcag cacggagcgg atcaacggtc                            100


<210>  58
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: OXA 48 I

<400>  58
gcattaagca aggggacgtt atgcgtgtat tagccttatc ggctgtgttt ttggtggcat       60

cgattatcgg aatgcctgcg gtagcaaagg aatggcaaga                            100


<210>  59
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: OXA 48 II

<400>  59
aacttgatga taatgtgtgg ttttttgcga tgaatatgga tatgcccaca tcggatggtt       60

tagggctgcg ccaagccatc acaaaagaag tgctcaaaca                            100


<210>  60
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: VIM 552 C

<400>  60
gaacggcaca accaccgtat agcacgttcg ctgacgggac gtatacaacc agattgtcgg       60

tcgaatgcgc agcaccagga tagaagagct ctactggacc                            100


<210>  61
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: VIM 246

<400>  61
tctacccgtc caatggtctc attgtccgtg atggtgatga gttgcttttg attgatacag       60

cgtggggtgc gaaaaacaca gcggcacttc tcgcggagat                            100


<210>  62
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: IMP 114

<400>  62
ttgccagatt taaaaattga aaagcttgat gaaggcgttt atgttcatac ttcgtttgaa       60

gaagttaacg ggtggggcgt tgttcctaaa catggtttgg                            100


<210>  63
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: IMP 480I/II

<400>  63
tttttatcca ggcccagggc acactcaaga taacgtagtg gtttggttac ctgaaaagaa       60

aattttattc ggtggttgct ttgttaaacc ggacggtctt                            100


<210>  64
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: SHV all

<400>  64
cgcagtgctg gcgcgggtgg atgccggtga cgaacagctg gagcgaaaga tccactatcg       60

ccagcaggat ctggtggact actcgccggt cagcgaaaaa                            100


<210>  65
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: NDM-1 75

<400>  65
gcagcttgtc ggccatgcgg gccgtatgag tgattgcggc gcggctatcg ggggcggaat       60

ggctcatcac gatcatgctg gccttgggga acgccgcacc                            100


<210>  66
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: NDM-1 392

<400>  66
cgccgcaacc atcccctctt gcggggcaag ctggttcgac aacgcattgg cataagtcgc       60

aatccccgcc gcatgcagcg cgtccatacc gcccatcttg                            100


<210>  67
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CMY II 304

<400>  67
atgccgatat cgttaatcgc accatcaccc cgttgatgca ggagcaggct attccgggta       60

tggccgttgc cgttatctac cagggaaaac cctattattt                            100


<210>  68
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CMY II 1199

<400>  68
ttgaggtaaa cccgcccgcc cccgcagtga aagcctcatg ggtgcataaa acgggctcca       60

ctggtggatt tggcagctac gtagccttcg ttccagaaaa                            100


<210>  69
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CMY I MOX

<400>  69
tcaaggagca caggatcccg ggcatggcgg tggccgtgct caaggatggc aaggcccact       60

acttcaatta cggggtggcc aaccgggaga gcggggccgg                            100


<210>  70
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: ACC 660

<400>  70
taggcatgca tcacagctac ttgaaggttc cggctgacca gatggaaaac tatgcgtggg       60

gctacaacaa gaaagatgag ccagtgcacg tgaatatgga                            100


<210>  71
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: MIR ACT

<400>  71
ggatgaggtc acggataacg cctctctgtt gcgcttttat caaaactggc agccgcagtg       60

gaagccgggc accacgcgtc tttacgccaa tgccagcatc                            100


<210>  72
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: DHA 753

<400>  72
ttgatgcgga atcttacggc gtgaaatccg cctcaaaaga tatgctgcgc tgggcggaaa       60

tgaatatgga gccgtcacgg gccggtaatg cggatctgga                            100


<210>  73
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: DHA 1110

<400>  73
cgcctatgtc gcctttattc cggaaaaaca ggtggcgatt gtgattctgg cgaataaaaa       60

ctacccgaat accgaaagag tcaaagctgc acaggctatt                            100


<210>  74
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: TEM all

<400>  74
gcaaactatt aactggcgaa ctacttactc tagcttcccg gcaacaatta atagactgga       60

tggaggcgga taaagttgca ggaccacttc tgcgctcggc                            100


<210>  75
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: FOX

<400>  75
ggttccgcct tggatggtgt gaccatggcc gagcttgcca cctacagtgc gggtggtttg       60

ccgctgcagt tccccgatga ggtggattcg aatgacaaga                            100


<210>  76
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: KPC I

<400>  76
cttgtctctc atggccgctg gctggctttt ctgccaccgc gctgaccaac ctcgtcgcgg       60

aaccattcgc taaactcgaa caggactttg gcggctccat                            100


<210>  77
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: KPC II

<400>  77
tgacggtggc ggagctgtcc gcggccgccg tgcaatacag tgataacgcc gccgccaatt       60

tgttgctgaa ggagttgggc ggcccggccg ggctgacggc                            100


<210>  78
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-M 8 +25

<400>  78
ccaccggcgc tgccagcatt caggctgggc tacccacatc gtgggttgtc ggggataaaa       60

ccggcagcgg tgattatggt acgacgaatg acatcgccgt                            100


<210>  79
<211>  100
<212>  DNA
<213>  artificial sequence

<220>
<223>  Primer: CTX-M9 +64

<400>  79
gcggccgcgc tcagttctgc cagcgtcatt gtgccgttga cgtgtttttc ggcaatcgga       60

ttgtagttaa ccagatcggc aggcttgatc tcgacaggct                            100


<210>  80
<211>  36
<212>  DNA
<213>  artificial sequence

<220>
<223>  cDET-1 beacon

<400>  80
cgctgccttt cgagagaacc ggcttcgaag gcagcg                                 36


<210>  81
<211>  24
<212>  DNA
<213>  artificial sequence

<220>
<223>  cDET-1 TaqMan

<400>  81
ctttcgagag aaccggcttc gaag                                              24


<210>  82
<211>  36
<212>  DNA
<213>  artificial sequence

<220>
<223>  cDET-2 beacon

<400>  82
cgctgccagt ctgaacgcaa ctctgctgat gcagcg                                 36


<210>  83
<211>  24
<212>  DNA
<213>  artificial sequence

<220>
<223>  cDET-2 TaqMan

<400>  83
cagtctgaac gcaactctgc tgat                                              24


<210>  84
<211>  36
<212>  DNA
<213>  artificial sequence

<220>
<223>  cDET-3 beacon

<400>  84
cgctgccagt ctagagaacc ggctgctgat gcagcg                                 36


<210>  85
<211>  24
<212>  DNA
<213>  artificial sequence

<220>
<223>  cDET-3 TaqMan

<400>  85
cagtctagag aaccggctgc tgat                                              24


