
                                SEQUENCE LISTING

<110> Xing, Michael Mingzhao

<120> Genetic Amplification of IQGAP1 in
  Cancer

<130> 001107.00870

<150> 61/326010           
<151> 2010-04-20  

<160> 32

<170> FastSEQ for Windows Version 4.0

<210> 1
<211> 19
<212> DNA
<213> Artificial Sequence

<220> 
<223> shRNA target sequence for IQGAP1, nt 763-781 of
      cDNA with translation start site set at +1

<400> 1
gcatccactt accaggata                                                   19

<210> 2
<211> 19
<212> DNA
<213> Artificial Sequence

<220> 
<223> scrambled control for shRNA target

<400> 2
gccacccata gaaatttcg                                                   19

<210> 3
<211> 19
<212> DNA
<213> Artificial Sequence

<220> 
<223> shRNA target for IQGAP3, nt 4004-4023

<400> 3
ggacctgagc aagctagaa                                                   19

<210> 4
<211> 19
<212> DNA
<213> Artificial Sequence

<220> 
<223> scrambled control for IQGAP3 shRNA

<400> 4
gccaacggac gtaatgaag                                                   19

<210> 5
<211> 9
<212> DNA
<213> Artificial Sequence

<220> 
<223> part of construct for shRNA

<400> 5
ttcaagaga                                                               9

<210> 6
<211> 7
<212> DNA
<213> Artificial Sequence

<220> 
<223> part of construct for shRNA

<400> 6
ttttttc                                                                 7

<210> 7
<211> 11
<212> DNA
<213> Artificial Sequence

<220> 
<223> part of construct for shRNA

<400> 7
tcgagaaaaa a                                                           11

<210> 8
<211> 9
<212> DNA
<213> Artificial Sequence

<220> 
<223> part of construct for shRNA

<400> 8
tctcttgaa                                                               9

<210> 9
<211> 20
<212> DNA
<213> Artificial Sequence

<220> 
<223> forward primer for IQGAP1, exon 19

<400> 9
tgcatccatt cttgcctgtg                                                  20

<210> 10
<211> 24
<212> DNA
<213> Artificial Sequence

<220> 
<223> forward primer for IQGAP1, exon 20-22

<400> 10
ttgatgcttg ggaagtaata tgtc                                             24

<210> 11
<211> 24
<212> DNA
<213> Artificial Sequence

<220> 
<223> forward primer for IQGAP1, exon 23

<400> 11
agacaatgct atttcctgag acgt                                             24

<210> 12
<211> 24
<212> DNA
<213> Artificial Sequence

<220> 
<223> forward primer for IQGAP1, exon 29

<400> 12
tgtttcgtct gttccagatt attg                                             24

<210> 13
<211> 21
<212> DNA
<213> Artificial Sequence

<220> 
<223> forward primer for IQGAP1, exon 29

<400> 13
ttgttgctcc tgatgccttt g                                                21

<210> 14
<211> 19
<212> DNA
<213> Artificial Sequence

<220> 
<223> forward primer for IQGAP3, exon 19

<400> 14
agctctggaa agccaacgt                                                   19

<210> 15
<211> 20
<212> DNA
<213> Artificial Sequence

<220> 
<223> forward primer for TMEM84, exon 3

<400> 15
ggtgatgggc aggataagag                                                  20

<210> 16
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> forward primer for beta-actin exon 4

<400> 16
tcacccacac tgtgcccatc tacga                                            25

<210> 17
<211> 21
<212> DNA
<213> Artificial Sequence

<220> 
<223> reverse primer for IQGAP1, exon 19

<400> 17
tgaccgttta ttacccctgc t                                                21

<210> 18
<211> 23
<212> DNA
<213> Artificial Sequence

<220> 
<223> reverse  primer for IQGAP1, exon 20-22

<400> 18
aaagaggtct gtggagaata ccc                                              23

<210> 19
<211> 22
<212> DNA
<213> Artificial Sequence

<220> 
<223> reverse primer for IQGAP1, exon 23

<400> 19
gctcttatgg cagtagctga gg                                               22

<210> 20
<211> 24
<212> DNA
<213> Artificial Sequence

<220> 
<223> reverse primer for IQGAP1, exon 29

<400> 20
tccacagact ctcttaagca cttg                                             24

<210> 21
<211> 20
<212> DNA
<213> Artificial Sequence

<220> 
<223> reverse primer for IQGAP1, exon 29

<400> 21
gcaatggagc ccagatttcg                                                  20

<210> 22
<211> 20
<212> DNA
<213> Artificial Sequence

<220> 
<223> reverse  primer for IQGAP3, exon 19

<400> 22
cctcagaaag tgggaatgct                                                  20

<210> 23
<211> 19
<212> DNA
<213> Artificial Sequence

<220> 
<223> reverse primer for TMEM84, exon 3

<400> 23
ccttccaggt gaggaatcg                                                   19

<210> 24
<211> 23
<212> DNA
<213> Artificial Sequence

<220> 
<223> reverse primer for beta-actin exon  4

<400> 24
tcggtgagga tcttcatgag gta                                              23

<210> 25
<211> 21
<212> DNA
<213> Artificial Sequence

<220> 
<223> sequencing primer for IQGAP1, exon 19

<400> 25
tgaccgttta ttacccctgc t                                                21

<210> 26
<211> 23
<212> DNA
<213> Artificial Sequence

<220> 
<223> sequencing primer for IQGAP1, exon 20-22

<400> 26
aaagaggtct gtggagaata ccc                                              23

<210> 27
<211> 24
<212> DNA
<213> Artificial Sequence

<220> 
<223> sequencing primer for IQGAP1, exon 23

<400> 27
agacaatgct atttcctgag acgt                                             24

<210> 28
<211> 24
<212> DNA
<213> Artificial Sequence

<220> 
<223> sequencing  primer for IQGAP1, exon 29

<400> 28
tgtttcgtct gttccagatt attg                                             24

<210> 29
<211> 20
<212> DNA
<213> Artificial Sequence

<220> 
<223>  probe IQGAP1, exon 29

<400> 29
catcattgac ctgtcagcag                                                  20

<210> 30
<211> 20
<212> DNA
<213> Artificial Sequence

<220> 
<223>  probe for IQGAP3, exon 19

<400> 30
ctttgttatc cagctccagg                                                  20

<210> 31
<211> 20
<212> DNA
<213> Artificial Sequence

<220> 
<223> probe for TMEM84, exon 3

<400> 31
tgtaatttca cctttctccg                                                  20

<210> 32
<211> 21
<212> DNA
<213> Artificial Sequence

<220> 
<223>  probe for beta-actin, exon 4

<400> 32
atgccctccc ccatgccatc c                                                21
