SEQUENCE LISTING

<110>   NOVARTIS AG

<120>   AVIAN ROTAVIRUS
        
<130>   P054197WO

<150>   GB 1003630.9
<151>   2010-03-04

<160>   36

<170>   SeqWin99, version 1.02

<210>   1
<211>   363
<212>   DNA
<213>   Avian rotavirus D

<400>   1
gcgacaactg agacaactgt gccatctatt aatgaacatt tgtatgcttt aattgtagga   60
actagaggta gatatcagat gcaggctgga ccagtctttc ctcctggtat gcgttgggat   120
gatattctga ataggtatac accagcgaga caatctaata tgcaacggtt gatgacaact   180
gcttccatac ttgatctagt ttccatgtag gcgcggaaga tgccactcga gataacatca   240
aggttaaaat acgtggaact aggctgagta tgtggcacag taatgcggag taatatctgc   300
atggaagaaa tctgttatca tacgtcagca gctattatct ttgaccggat cccgggaatt   360
cgg                                                                 363

<210>   2
<211>   1194
<212>   DNA
<213>   Avian Rotavirus D

<220>
<221>   misc_feature
<222>   408
<223>   n is any nucleotide

<220>
<221>   misc_feature
<222>   690
<223>   n is any nucleotide

<400>   2
atggaggcgc tgtcttcaat tgcgttgact gtcagagaag cacgagaaaa gatcataaat   60
ggaacaatat attccaacgt gtcggatgta atacaacaat tcaatcaaat ggttagagta   120
ttgaatggat caacttttac tactggtgga ttggctacta tgccacttag agaatggact   180
tttgatctgc cgcaattggg tacaacttta ctaaatatag atgctaatta tgtagaatca   240
atgacaccaa cacttgatat gttgactgag tttgtgattg ctgtatgtga aactgagttg   300
ctagttgata acaatagaaa tggtgcatac ccacaatctg aagcattgag attactatct   360
aacaataaat atgttttcct taatatggat ttaggatcta agtacatntc agaatggcat   420
tatagattgt cagctaggga tccaatgttt tcaaatcatg taccatatat attcccatat   480
gatatggcta tagcatatga tagagtaacg gctgcttacg ataatgtgtc aggaacacga   540
tttgcatcac taaataatgc tatacatttt gctgcatttg atcaagactt tgttcgtgga   600
cagccagcta atgcgaggca atttgaatac ctttacaatt tgaggacgcc agtgtctaat   660
gctactatag tcatacatcc aatatcagan attttgtcag taccaagtat gattagaaac   720
caagctgcca cacactattg gccatacaac ccatataata taccgacgtt tagagatgac   780
attagagttg aattccaact tgcaggacaa gtaatatatg tagctgcgaa tctgggaatg   840
catactattc cgcaatttga tgcagtaaat atcatcttga caatgaggag attgccattg   900
ctagctgatt tgcaaaatat attcccagct ggaaatccat cagcaacaca tcaagctgta   960
atttcaacta aaattgaagt gctgaatgcg acaactgaaa caactgtacc atctattgat   1020
gaacatttgt atgctttaat tgtaggaact agaggtagat atcagatgca ggctggacca   1080
gtctttcctc ctggtatgcg ttgggatgat attctgaata ggtatacacc agcaagacaa   1140
tctaatatgc aacggttgat gacaactgct tccatacttg atctagtttc catg         1194

<210>   3
<211>   69
<212>   PRT
<213>   Avian Rotavirus D

<400>   3
Ala Thr Thr Glu Thr Thr Val Pro Ser Ile Asn Glu His Leu Tyr Ala 
1               5                   10                  15      

Leu Ile Val Gly Thr Arg Gly Arg Tyr Gln Met Gln Ala Gly Pro Val 
            20                  25                  30          

Phe Pro Pro Gly Met Arg Trp Asp Asp Ile Leu Asn Arg Tyr Thr Pro 
        35                  40                  45              

Ala Arg Gln Ser Asn Met Gln Arg Leu Met Thr Thr Ala Ser Ile Leu 
    50                  55                  60                  

Asp Leu Val Ser Met 
65                  

<210>   4
<211>   398
<212>   PRT
<213>   Avian Rotavirus D

<220>
<221>   SITE
<222>   136
<223>   Xaa is any amino acid

<220>
<221>   SITE
<222>   230
<223>   Xaa is any amino acid


<400>   4
Met Glu Ala Leu Ser Ser Ile Ala Leu Thr Val Arg Glu Ala Arg Glu 
1               5                   10                  15      

Lys Ile Ile Asn Gly Thr Ile Tyr Ser Asn Val Ser Asp Val Ile Gln 
            20                  25                  30          

Gln Phe Asn Gln Met Val Arg Val Leu Asn Gly Ser Thr Phe Thr Thr 
        35                  40                  45              

Gly Gly Leu Ala Thr Met Pro Leu Arg Glu Trp Thr Phe Asp Leu Pro 
    50                  55                  60                  

Gln Leu Gly Thr Thr Leu Leu Asn Ile Asp Ala Asn Tyr Val Glu Ser 
65                  70                  75                  80  

Met Thr Pro Thr Leu Asp Met Leu Thr Glu Phe Val Ile Ala Val Cys 
                85                  90                  95      

Glu Thr Glu Leu Leu Val Asp Asn Asn Arg Asn Gly Ala Tyr Pro Gln 
            100                 105                 110         

Ser Glu Ala Leu Arg Leu Leu Ser Asn Asn Lys Tyr Val Phe Leu Asn 
        115                 120                 125             

Met Asp Leu Gly Ser Lys Tyr Xaa Ser Glu Trp His Tyr Arg Leu Ser 
    130                 135                 140                 

Ala Arg Asp Pro Met Phe Ser Asn His Val Pro Tyr Ile Phe Pro Tyr 
145                 150                 155                 160 

Asp Met Ala Ile Ala Tyr Asp Arg Val Thr Ala Ala Tyr Asp Asn Val 
                165                 170                 175     

Ser Gly Thr Arg Phe Ala Ser Leu Asn Asn Ala Ile His Phe Ala Ala 
            180                 185                 190         

Phe Asp Gln Asp Phe Val Arg Gly Gln Pro Ala Asn Ala Arg Gln Phe 
        195                 200                 205             

Glu Tyr Leu Tyr Asn Leu Arg Thr Pro Val Ser Asn Ala Thr Ile Val 
    210                 215                 220                 

Ile His Pro Ile Ser Xaa Ile Leu Ser Val Pro Ser Met Ile Arg Asn 
225                 230                 235                 240 

Gln Ala Ala Thr His Tyr Trp Pro Tyr Asn Pro Tyr Asn Ile Pro Thr 
                245                 250                 255     

Phe Arg Asp Asp Ile Arg Val Glu Phe Gln Leu Ala Gly Gln Val Ile 
            260                 265                 270         

Tyr Val Ala Ala Asn Leu Gly Met His Thr Ile Pro Gln Phe Asp Ala 
        275                 280                 285             

Val Asn Ile Ile Leu Thr Met Arg Arg Leu Pro Leu Leu Ala Asp Leu 
    290                 295                 300                 

Gln Asn Ile Phe Pro Ala Gly Asn Pro Ser Ala Thr His Gln Ala Val 
305                 310                 315                 320 

Ile Ser Thr Lys Ile Glu Val Leu Asn Ala Thr Thr Glu Thr Thr Val 
                325                 330                 335     

Pro Ser Ile Asp Glu His Leu Tyr Ala Leu Ile Val Gly Thr Arg Gly 
            340                 345                 350         

Arg Tyr Gln Met Gln Ala Gly Pro Val Phe Pro Pro Gly Met Arg Trp 
        355                 360                 365             

Asp Asp Ile Leu Asn Arg Tyr Thr Pro Ala Arg Gln Ser Asn Met Gln 
    370                 375                 380                 

Arg Leu Met Thr Thr Ala Ser Ile Leu Asp Leu Val Ser Met 
385                 390                 395             

<210>   5
<211>   9
<212>   PRT
<213>   Avian Rotavirus D

<400>   5
Leu Ser Ser Ile Ala Leu Thr Val Arg 
1               5                   

<210>   6
<211>   10
<212>   PRT
<213>   Avian Rotavirus D

<400>   6
Tyr Ser Asn Val Ser Asp Val Ile Gln Gln 
1               5                   10  

<210>   7
<211>   7
<212>   PRT
<213>   Avian Rotavirus D

<400>   7
Met Val Arg Val Leu Asn Gly 
1               5           

<210>   8
<211>   17
<212>   PRT
<213>   Avian Rotavirus D

<400>   8
Asp Leu Pro Gln Leu Gly Thr Thr Leu Leu Asn Ile Asp Ala Asn Tyr 
1               5                   10                  15      

Val 
    

<210>   9
<211>   16
<212>   PRT
<213>   Avian Rotavirus D

<400>   9
Leu Thr Glu Phe Val Ile Ala Val Cys Glu Thr Glu Leu Leu Val Asp 
1               5                   10                  15      


<210>   10
<211>   9
<212>   PRT
<213>   Avian Rotavirus D

<400>   10
Pro Gln Ser Glu Ala Leu Arg Leu Leu 
1               5                   

<210>   11
<211>   8
<212>   PRT
<213>   Avian Rotavirus D

<400>   11
Asn Asn Lys Tyr Val Phe Leu Asn 
1               5               

<210>   12
<211>   8
<212>   PRT
<213>   Avian Rotavirus D

<400>   12
Glu Trp His Tyr Arg Leu Ser Ala 
1               5               

<210>   13
<211>   13
<212>   PRT
<213>   Avian Rotavirus D

<400>   13
Ser Asn His Val Pro Tyr Ile Phe Pro Tyr Asp Met Ala 
1               5                   10              

<210>   14
<211>   11
<212>   PRT
<213>   Avian Rotavirus D

<400>   14
Ala Tyr Asp Arg Val Thr Ala Ala Tyr Asp Asn 
1               5                   10      

<210>   15
<211>   13
<212>   PRT
<213>   Avian Rotavirus D

<400>   15
Leu Asn Asn Ala Ile His Phe Ala Ala Phe Asp Gln Asp 
1               5                   10              

<210>   16
<211>   29
<212>   PRT
<213>   Avian Rotavirus D

<400>   16
Phe Glu Tyr Leu Tyr Asn Leu Arg Thr Pro Val Ser Asn Ala Thr Ile 
1               5                   10                  15      

Val Ile His Pro Ile Ser Ile Leu Ser Val Pro Ser Met 
            20                  25                  

<210>   17
<211>   7
<212>   PRT
<213>   Avian rotavirus D

<400>   17
Ala Thr His Tyr Trp Pro Tyr 
1               5           

<210>   18
<211>   16
<212>   PRT
<213>   Avian Rotaviru D

<400>   18
Arg Val Glu Phe Gln Leu Ala Gly Gln Val Ile Tyr Val Ala Ala Asn 
1               5                   10                  15      


<210>   19
<211>   10
<212>   PRT
<213>   Avian Rotavirus D

<400>   19
Ile Pro Gln Phe Asp Ala Val Asn Ile Ile 
1               5                   10  

<210>   20
<211>   15
<212>   PRT
<213>   Avian Rotavirus D

<400>   20
Thr Met Arg Arg Leu Pro Leu Leu Ala Asp Leu Gln Asn Ile Phe 
1               5                   10                  15  

<210>   21
<211>   15
<212>   PRT
<213>   Avian Rotavirus D

<400>   21
Thr His Gln Ala Val Ile Ser Thr Lys Ile Glu Val Leu Asn Ala 
1               5                   10                  15  

<210>   22
<211>   15
<212>   PRT
<213>   Avian Rotavirus D

<400>   22
Thr Val Pro Ser Ile Asp Glu His Leu Tyr Ala Leu Ile Val Gly 
1               5                   10                  15  

<210>   23
<211>   8
<212>   PRT
<213>   Avian Rotavirus D

<400>   23
Gln Ala Gly Pro Val Phe Pro Pro 
1               5               

<210>   24
<211>   19
<212>   DNA
<213>   Artificial Sequence

<220>
<223>   primer

<400>   24
gcracaactg aracaacwg                                                19

<210>   25
<211>   19
<212>   DNA
<213>   Artificial Sequence

<220>
<223>   primer

<400>   25
ggaagcagtt gtcatcaac                                                19

<210>   26
<211>   30
<212>   DNA
<213>   probe

<400>   26
ttgcatatta gattgtctcg ctggtgtata                                    30

<210>   27
<211>   20
<212>   DNA
<213>   Artificial Sequence

<220>
<223>   primer

<400>   27
ttagaaacca agctgccaca                                               20

<210>   28
<211>   20
<212>   DNA
<213>   Artificial Sequence

<220>
<223>   primer

<400>   28
tgcaaatcag ctagcaatgg                                               20

<210>   29
<211>   20
<212>   DNA
<213>   Artificial Sequence

<220>
<223>   primer

<400>   29
tgccattgct agctgatttg                                               20

<210>   30
<211>   20
<212>   DNA
<213>   Artificial Sequence

<220>
<223>   primer

<400>   30
acgcatacca ggaggaaaga                                               20

<210>   31
<211>   20
<212>   DNA
<213>   primer

<400>   31
aaccaagctg ccacacacta                                               20

<210>   32
<211>   20
<212>   DNA
<213>   primer

<400>   32
tgcaaatcag ctagcaatgg                                               20

<210>   33
<211>   20
<212>   DNA
<213>   Artificial Sequence

<220>
<223>   primer

<400>   33
aaaccaagct gccacacact                                               20

<210>   34
<211>   20
<212>   DNA
<213>   Artificial Sequence

<220>
<223>   primer

<400>   34
aaaccaagct gccacacact                                               20

<210>   35
<211>   20
<212>   DNA
<213>   Artificial Sequence

<220>
<223>   primer

<400>   35
atttgaggac gccagtgtct                                               20

<210>   36
<211>   20
<212>   DNA
<213>   Artificial Sequence

<220>
<223>   primer

<400>   36
atttgaggac gccagtgtct                                               20

