                         SEQUENCE LISTING

<110>  FRE2933 Laboratoire de Neurobiologie des Annlides, 
       Universit des Sciences et des Technologies de Lille-Lille1
       Tasiemski, Aurlie
       Michel, Salzet
 
<120>  Antimicrobial peptide from Alvinella pompejana: the Alvinellacine

<130>  IOB 09 BC CNR ALVI

<160>  25    

<170>  PatentIn version 3.5

<210>  1
<211>  22
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  peptide derived from Alvinella pompejana


<220>
<221>  PEPTIDE
<222>  (1)..(22)

<400>  1

Arg Gly Cys Tyr Thr Arg Cys Trp Lys Val Gly Arg Asn Gly Arg Val 
1               5                   10                  15      


Cys Met Arg Val Cys Thr 
            20          


<210>  2
<211>  235
<212>  PRT
<213>  Alvinella pompejana


<220>
<221>  MISC_FEATURE
<222>  (153)..(153)
<223>  Xaa is either L or F

<400>  2

Met Asp Cys Thr Pro Ala Pro Tyr Asp Lys Glu Gly Leu Val Thr Lys 
1               5                   10                  15      


Ser Gln Lys Thr Thr Met Met Ser Trp Gly Leu Met Thr Tyr Ser Val 
            20                  25                  30          


Val Val Thr Leu Val Leu Val Phe Leu Val Val Phe Gly Ser Leu His 
        35                  40                  45              


Met Glu Arg Gln Leu Gln Lys Cys Asn Ala Gln His Thr Ser Ile Glu 
    50                  55                  60                  


Pro Leu Met Arg Glu Glu Glu Glu Arg Phe Pro Thr Lys Val Tyr His 
65                  70                  75                  80  


Ile Val Asp Glu Asp Glu Ser Glu Gln Asp Ile Glu Val Asp Gln Ala 
                85                  90                  95      


Arg Asp Arg Glu Ile Ile His Leu Lys Glu Arg Asp Ser Asp Glu Tyr 
            100                 105                 110         


Ser Leu Leu Val Phe Asp Phe Lys Gln Asn Leu Gly Ala Ile Tyr Asp 
        115                 120                 125             


Asp Leu Thr Gly Ser Cys Tyr Val Met Gly Gly Leu Asp Ser Ser Leu 
    130                 135                 140                 


Pro Asp Ser Val His Ile Gln Arg Xaa Leu Glu Ser Lys Thr Asp Gly 
145                 150                 155                 160 


Asn Asp Ile Val Lys Glu Leu Asp Tyr Thr Val Asn Ser Glu Arg Pro 
                165                 170                 175     


Leu Arg Asp Leu Ser Leu Ile Pro Ala Glu Leu Gln Thr Leu Cys Trp 
            180                 185                 190         


Gly Lys Pro Ala Phe Trp Ile Ser Lys Thr Leu Thr Glu Asp Lys Gly 
        195                 200                 205             


Ser His Arg Gln Lys Arg Gly Cys Tyr Thr Arg Cys Trp Lys Val Gly 
    210                 215                 220                 


Arg Asn Gly Arg Val Cys Met Arg Val Cys Thr 
225                 230                 235 


<210>  3
<211>  169
<212>  PRT
<213>  Alvinella pompejana


<220>
<221>  MISC_FEATURE
<222>  (15)..(15)
<223>  Xaa is either M or I

<220>
<221>  MISC_FEATURE
<222>  (16)..(16)
<223>  Xaa is either V or W

<220>
<221>  MISC_FEATURE
<222>  (29)..(29)
<223>  Xaa is either Q or E

<220>
<221>  MISC_FEATURE
<222>  (60)..(60)
<223>  Xaa is any amino acid

<400>  3

Met Arg Glu Glu Glu Glu Arg Phe Pro Thr Lys Val Tyr His Xaa Xaa 
1               5                   10                  15      


Asp Glu Asp Glu Ser Glu Gln Asp Ile Glu Val Asp Xaa Ala Arg Asp 
            20                  25                  30          


Arg Glu Ile Ile His Leu Lys Glu Arg Asp Ser Asp Glu Tyr Ser Leu 
        35                  40                  45              


Leu Val Phe Asp Phe Lys Gln Asn Leu Gly Ala Xaa Tyr Asp Asp Leu 
    50                  55                  60                  


Thr Gly Ser Cys Tyr Val Met Gly Gly Leu Asp Ser Ser Leu Pro Asp 
65                  70                  75                  80  


Ser Val His Ile Gln Arg Leu Leu Glu Ser Lys Thr Asp Gly Asn Asp 
                85                  90                  95      


Ile Val Lys Glu Leu Asp Tyr Thr Val Asn Ser Glu Arg Pro Leu Arg 
            100                 105                 110         


Asp Leu Ser Leu Ile Pro Ala Glu Leu Gln Thr Leu Cys Trp Gly Lys 
        115                 120                 125             


Pro Ala Phe Trp Ile Ser Lys Thr Leu Thr Glu Asp Lys Gly Ser His 
    130                 135                 140                 


Arg Gln Lys Arg Gly Cys Tyr Thr Arg Cys Trp Lys Val Gly Arg Asn 
145                 150                 155                 160 


Gly Arg Val Cys Met Arg Val Cys Thr 
                165                 


<210>  4
<211>  99
<212>  PRT
<213>  Alvinella pompejana


<220>
<221>  MISC_FEATURE
<222>  (16)..(16)
<223>  Xaa is either R or Q

<220>
<221>  MISC_FEATURE
<222>  (17)..(17)
<223>  Xaa is either L or F

<220>
<221>  MISC_FEATURE
<222>  (20)..(20)
<223>  Xaa is either S or N

<220>
<221>  MISC_FEATURE
<222>  (24)..(24)
<223>  Xaa is either G or D

<220>
<221>  MISC_FEATURE
<222>  (60)..(60)
<223>  Xaa is either A or V

<220>
<221>  MISC_FEATURE
<222>  (73)..(73)
<223>  Xaa is either S or F

<400>  4

Met Gly Gly Leu Asp Ser Ser Leu Pro Asp Ser Val His Ile Gln Xaa 
1               5                   10                  15      


Xaa Leu Glu Xaa Lys Thr Asp Xaa Asn Asp Ile Val Lys Glu Leu Asp 
            20                  25                  30          


Tyr Thr Val Asn Ser Glu Arg Pro Leu Arg Asp Leu Ser Leu Ile Pro 
        35                  40                  45              


Ala Glu Leu Gln Thr Leu Cys Trp Gly Lys Pro Xaa Phe Trp Ile Ser 
    50                  55                  60                  


Lys Thr Leu Thr Glu Asp Lys Gly Xaa His Arg Gln Lys Arg Gly Cys 
65                  70                  75                  80  


Tyr Thr Arg Cys Trp Lys Val Gly Arg Asn Gly Arg Val Cys Met Arg 
                85                  90                  95      


Val Cys Thr 
            


<210>  5
<211>  180
<212>  PRT
<213>  Alvinella pompejana

<400>  5

Met Gln Arg Pro His Thr Ser Ile Glu Pro Leu Met Arg Glu Glu Glu 
1               5                   10                  15      


Glu Arg Phe Pro Thr Lys Val Tyr His Ile Val Asp Asp Asp Glu Thr 
            20                  25                  30          


Glu Gln Asp Ile Glu Val Asp Gln Ala Arg Asp Arg Glu Ile Ile His 
        35                  40                  45              


Leu Lys Glu Arg Asp Ser Asp Glu Tyr Ser Leu Leu Val Phe Asp Phe 
    50                  55                  60                  


Lys Gln Asn Leu Gly Ala Ile Tyr Asp Asp Leu Thr Gly Ser Cys Tyr 
65                  70                  75                  80  


Val Met Gly Gly Leu Asp Ser Ser Leu Pro Asp Ser Val His Ile Arg 
                85                  90                  95      


Gln Leu Leu Glu Asn Lys Thr Asp Gly Asn Asp Ile Val Lys Glu Leu 
            100                 105                 110         


Asp Tyr Thr Val Asn Ser Glu Arg Pro Leu Arg Asp Leu Ser Leu Ile 
        115                 120                 125             


Pro Ala Glu Leu Gln Thr Leu Cys Trp Gly Lys Pro Val Phe Trp Ile 
    130                 135                 140                 


Ser Lys Thr Leu Thr Glu Asp Lys Gly Phe His Arg Gln Lys Arg Gly 
145                 150                 155                 160 


Cys Tyr Thr Arg Cys Trp Thr Val Gly Arg Asn Gly Arg Val Cys Met 
                165                 170                 175     


Arg Val Cys Thr 
            180 


<210>  6
<211>  208
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  peptide derived from Alvinella pompejana

<400>  6

Met Thr Tyr Ser Val Val Val Thr Leu Val Leu Val Phe Leu Val Val 
1               5                   10                  15      


Phe Gly Ser Leu His Met Glu Arg Gln Leu Gln Lys Cys Asn Ala Gln 
            20                  25                  30          


His Thr Ser Ile Glu Pro Leu Met Arg Glu Glu Glu Glu Arg Phe Pro 
        35                  40                  45              


Thr Lys Val Tyr His Ile Val Asp Glu Asp Glu Ser Glu Gln Asp Ile 
    50                  55                  60                  


Glu Val Asp Gln Ala Arg Asp Arg Glu Ile Ile His Leu Lys Glu Arg 
65                  70                  75                  80  


Asp Ser Asp Glu Tyr Ser Leu Leu Val Phe Asp Phe Lys Gln Asn Leu 
                85                  90                  95      


Gly Ala Ile Tyr Asp Asp Leu Thr Gly Ser Cys Tyr Val Met Gly Gly 
            100                 105                 110         


Leu Asp Ser Ser Leu Pro Asp Ser Val His Ile Gln Arg Leu Leu Glu 
        115                 120                 125             


Ser Lys Thr Asp Gly Asn Asp Ile Val Lys Glu Leu Asp Tyr Thr Val 
    130                 135                 140                 


Asn Ser Glu Arg Pro Leu Arg Asp Leu Ser Leu Ile Pro Ala Glu Leu 
145                 150                 155                 160 


Gln Thr Leu Cys Trp Gly Lys Pro Ala Phe Trp Ile Ser Lys Thr Leu 
                165                 170                 175     


Thr Glu Asp Lys Gly Ser His Arg Gln Lys Arg Gly Cys Tyr Thr Arg 
            180                 185                 190         


Cys Trp Lys Val Gly Arg Asn Gly Arg Val Cys Met Arg Val Cys Thr 
        195                 200                 205             


<210>  7
<211>  720
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  nucleic acid molecule derived from Alvinella pompejana

<400>  7
atgacgtatt ctgtagttgt gacgctggtc ttagtgtttc ttgtcgtctt cggtagtctg       60

catatggaac ggcagctgca gaaatgcaac gcgcagcata cttcgattga acccctgatg      120

cgtgaggaag aggagcgctt tcctacaaag gtttatcaca ttgtggacga ggatgaaagc      180

gaacaagaca tcgaagtaga ccaagcacgt gaccgggaga taatccattt gaaggagcgc      240

gatagtgatg aatattcatt acttgtcttc gatttcaagc agaatctcgg agccatttac      300

gacgatctta ccggatcgtg ttacgtcatg ggtggccttg acagcagtct gccagacagc      360

gtacatatac agcgattgct tgaaagcaag actgatggca atgacatcgt gaaggaactc      420

gactacaccg tcaactctga acgtccactg agagatctga gcctgattcc agccgagctc      480

cagacgttgt gttggggaaa acctgccttc tggatcagta agactctaac cgaagacaaa      540

ggttctcatc gtcagaagag aggttgttac acacgttgtt ggaaagttgg taggaacgga      600

cgtgtttgta tgcgtgtttg tacataactc acctgcttca tttcactgag aaacaggact      660

tattaacaat aaactaaaca ccaaatgatc tggcggctcc gtcctgccta cgcaggcaag      720


<210>  8
<211>  763
<212>  DNA
<213>  Alvinella pompejana

<400>  8
cttgctgaga gacaagcaga ggcaatggac tgtacgccgg caccttacga caaagaaggt       60

cttgtaacca agtcgcagaa gacgaccatg atgtcatggg gactgatgac gtattctgta      120

gttgtgacgc tggtcttagt gtttcttgtc gtcttcggta gtctgcatat ggaacggcag      180

ctgcagaaat gcaacgcgca gcatacttcg attgaacccc tgatgcgtga ggaagaggag      240

cgctttccta caaaggttta tcacattgtg gacgaggatg aaagcgaaca agacatcgaa      300

gtagaccaag cacgtgaccg ggagataatc catttgaagg agcgcgatag tgatgaatat      360

tcattacttg tcttcgattt caagcagaat ctcggagcca tttacgacga tcttaccgga      420

tcgtgttacg tcatgggtgg ccttgacagc agtctgccag acagcgtaca tatacagcga      480

ttgcttgaaa gcaagactga tggcaatgac atcgtgaagg aactcgacta caccgtcaac      540

tctgaacgtc cactgagaga tctgagcctg attccagccg agctccagac gttgtgttgg      600

ggaaaacctg ccttctggat cagtaagact ctaaccgaag acaaaggttc tcatcgtcag      660

aagagaggtt gttacacacg ttgttggaaa gttggtagga acggacgtgt ttgtatgcgt      720

gtttgtacat aactcacctg cttcatttca ctgagaaaca gga                        763


<210>  9
<211>  752
<212>  DNA
<213>  Alvinella pompejana

<400>  9
aggcaatgga ctgtacgccg gcaccttacg acaaagaagg tcttgtaacc aagtcgcaga       60

agacgaccat gatgtcatgg ggactgatga cgtattctgt agttgtgacg ctggtcttag      120

tgtttcttgt cgtcttcggt agtctgcata tggaacggca gctgcagaaa tgcaacgcgc      180

agcatacttc gattgaaccc ctgatgcgtg aggaagagga gcgctttcct acaaaggttt      240

atcacattgt ggacgaggat gaaagcgaac aagacatcga agtagaccaa gcacgtgacc      300

gggagataat ccatttgaag gagcgcgata gtgatgaata ttcattactt gtcttcgatt      360

tcaagcagaa tctcggagcc atttacgacg atcttaccgg atcgtgttac gtcatgggtg      420

gccttgacag cagtctgcca gacagcgtac atatacagcg attgcttgaa agcaagactg      480

atggcaatga catcgtgaag gaactcgact acaccgtcaa ctctgaacgt ccactgagag      540

atctgagcct gattccagcc gagctccaga cgttgtgttg gggaaaacct gccttctgga      600

tcagtaagac tctaaccgaa gacaaaggtt ctcatcgtca gaagagaggt tgttacacac      660

gttgttggaa agttggtagg aacggacgtg tttgtatgcg tgtttgtaca taactcacct      720

gcttcatttc actgagaaac aggacttatt aa                                    752


<210>  10
<211>  754
<212>  DNA
<213>  Alvinella pompejana

<400>  10
gcttcttgct gagagacaag cagaggcaat ggactgtacg ccggcacctt acgacaaaga       60

aggtcttgta accaagtcgc agaagacgac catgatgtca tggggactga tgacgtattc      120

tgtagttgtg acgctggtct tagtgtttct tgtcgtcttc ggtagtctgc atatggaacg      180

gcagctgcag aaatgcaacg cgcagcatac ttcgattgaa cccctgatgc gtgaggaaga      240

ggagcgcttt cctacaaagg tttatcacat tgtggacgag gatgaaagcg aacaagacat      300

cgaagtagac caagcacgtg accgggagat aatccatttg aaggagcgcg atagtgatga      360

atattcatta cttgtcttcg atttcaagca gaatctcgga gccatttacg acgatcttac      420

cggatcgtgt tacgtcatgg gtggccttga cagcagtctg ccagacagcg tacatataca      480

gcgattcctt gaaagcaaga ctgatggcaa tgacatcgtg aaggaactcg actacaccgt      540

caactctgaa cgtccactga gagatctgag cctgattcca gccgagctcc agacgttgtg      600

ttggggaaaa cctgccttct ggatcagtaa gactctaacc gaagacaaag gttctcatcg      660

tcagaagaga ggttgttaca cacgttgttg gaaagttggt aggaacggac gtgtttgtat      720

gcgtgtttgt acataactca cctgcttcat ttca                                  754


<210>  11
<211>  815
<212>  DNA
<213>  Alvinella pompejana

<400>  11
tgctgagaga caagcagagg caatggactg tacgccggca ccttacgaca aagaaggtct       60

tgtaaccaag tcgcagaaga cgaccatgat gtcatgggga ctgatgacgt attctgtagt      120

tgtgacgctg gtcttagtgt ttcttgtcgt cttcggtagt ctgcatatgg aacggcagct      180

gcagaaatgc aacgcgcagc atacttcgat tgaacccctg atgcgtgagg aagaggagcg      240

ctttcctaca aaggtttatc acattgtgga cgaggatgaa agcgaacaag acatcgaagt      300

agaccaagca cgtgaccggg agataatcca tttgaaggag cgcgatagtg atgaatattc      360

attacttgtc ttcgatttca agcagaatct cggagccatt tacgacgatc ttaccggatc      420

gtgttacgtc atgggtggcc ttgacagcag tctgccagac agcgtacata tacagcgatt      480

gcttgaaagc aagactgatg gcaatgacat cgtgaaggaa ctcgactaca ccgtcaactc      540

tgaacgtcca ctgagagatc tgagcctgat tccagccgag ctccagacgt tgtgttgggg      600

aaaacctgcc ttctggatca gtaagactct aaccgaagac aaaggttctc atcgtcagaa      660

gagaggttgt tacacacgtt gttggaaagt tggtaggaac ggacgtgttt gtatgcgtgt      720

ttgtacataa ctcacctgct tcatttcact gagaaacagg acttattaac ataaactaaa      780

caccaaatga tctggcggct ccgtcctgcc tacgc                                 815


<210>  12
<211>  782
<212>  DNA
<213>  Alvinella pompejana

<400>  12
gagaagcttc ttgctgagag acaagcagag gcaatggact gtacgccggc accttacgac       60

aaagaaggtc ttgtaaccaa gtcgcagaag acgaccatga tgtcatgggg actgatgacg      120

tattctgtag ttgtgacgct ggtcttagtg tttcttgtcg tcttcggtag tctgcatatg      180

gaacggcagc tgcagaaatg caacgcgcag catacttcga ttgaacccct gatgcgtgag      240

gaagaggagc gctttcctac aaaggtttat cacattgtgg acgaggatga aagcgaacaa      300

gacatcgaag tagaccaagc acgtgaccgg gagataatcc atttgaagga gcgcgatagt      360

gatgaatatt cattacttgt cttcgatttc aagcagaatc tcggagccat ttacgacgat      420

cttaccggat cgtgttacgt catgggtggc cttgacagca gtctgccaga cagcgtacat      480

atacagcgat tgcttgaaag caagactgat ggcaatgaca tcgtgaagga actcgactac      540

accgtcaact ctgaacgtcc actgagagat ctgagcctga ttccagccga gctccagacg      600

ttgtgttggg gaaaacctgc cttctggatc agtaagactc taaccgaaga caaaggttct      660

catcgtcaga agagaggttg ttacacacgt tgttggaaag ttggtaggaa cggacgtgtt      720

tgtatgcgtg tttgtacata actcacctgc ttcatttcac tgagaaacag gacttattaa      780

ca                                                                     782


<210>  13
<211>  770
<212>  DNA
<213>  Alvinella pompejana


<220>
<221>  misc_feature
<222>  (182)..(182)
<223>  n is a, c, g, or t

<400>  13
tgatgcgtga ggaagaggag cgctttccta caaaggttta tcacatgtgg gacgaggatg       60

aaagcgaaca agacatcgaa gtagaccaag cacgtgaccg ggagataatc catttgaagg      120

agcgcgatag tgatgaatat tcattacttg tcttcgattt caagcagaat ctcggagcca      180

tntacgacga tcttaccgga tcgtgttacg tcatgggtgg ccttgacagc agtctgccag      240

acagcgtaca tatacagcga ttgcttgaaa gcaagactga tggcaatgac atcgtgaagg      300

aactcgacta caccgtcaac tctgaacgtc cactgagaga tctgagcctg attccagccg      360

agctccagac gttgtgttgg ggaaaacctg ccttctggat cagtaagact ctaaccgaag      420

acaaaggttc tcatcgtcag aagagaggtt gttacacacg ttgttggaaa gttggtagga      480

acggacgtgt ttgtatgcgt gtttgtacat aactcacctg cttcatttca ctgagaaaca      540

ggacttatta acataaacta aacaccaaat gatctggcgg ctccgtcctg cctacgcagg      600

caaggcgaag tttctgtcta tatacgcgca cgattctcat cgatcttatc gccttgtgat      660

gatgatgatc atcatcatcc agtgtacaac ctcaaagcca taacgtcaga atattaagta      720

gcatttgtag gcttttcttt ctaataaaat catgatagtc cccaaaaaaa                 770


<210>  14
<211>  770
<212>  DNA
<213>  Alvinella pompejana

<400>  14
atgcgtgagg aagaggagcg ctttcctaca aaggtttatc acattgtgga cgaggatgaa       60

agcgaacaag acatcgaagt agaccaagca cgtgaccggg agataatcca tttgaaggag      120

cgcgatagtg atgaatattc attacttgtc ttcgatttca agcagaatct cggagccatt      180

tacgacgatc ttaccggatc gtgttacgtc atgggtggcc ttgacagcag tctgccagac      240

agcgtacata tacagcgatt gcttgaaagc aagactgatg gcaatgacat cgtgaaggaa      300

ctcgactaca ccgtcaactc tgaacgtcca ctgagagatc tgagcctgat tccagccgag      360

ctccagacgt tgtgttgggg aaaacctgcc ttctggatca gtaagactct aaccgaagac      420

aaaggttctc atcgtcagaa gagaggttgt tacacacgtt gttggaaagt tggtaggaac      480

ggacgtgttt gtatgcgtgt ttgtacataa ctcacctgct tcatttcact gagaaacagg      540

acttattaac ataaactaaa caccaaatga tctggcggct ccgtcctgcc tacgcaggca      600

aggcgaagtt tctgtctata tacgcgcacg attctcatcg atcttatcgc cttgtgatga      660

tgatgatcat catcatccag tgtacaacct caaagccata acgtcagaat attaagtagc      720

atttgtaggc ttttctttct aataaaatca tgatagtttc ctgaaaaaaa                 770


<210>  15
<211>  757
<212>  DNA
<213>  Alvinella pompejana

<400>  15
gcaacgcgca gcatacttcg attgaacccc tgatgcgtga ggaagaggag cgctttccta       60

caaaggttta tcacattgtg gacgaggatg aaagcgaaca agacatcgaa gtagacgagg      120

cacgtgaccg ggagataatc catttgaagg agcgcgatag tgatgaatat tcattacttg      180

tcttcgattt caagcagaat ctcggagcca tttacgacga tcttaccgga tcgtgttacg      240

tcatgggtgg ccttgacagc agtctgccag acagcgtaca tatacagcga ttgcttgaaa      300

gcaagactga tggcaatgac atcgtgaagg aactcgacta caccgtcaac tctgaacgtc      360

cactgagaga tctgagcctg attccagccg agctccagac gttgtgttgg ggaaaacctg      420

ccttctggat cagtaagact ctaaccgaag acaaaggttc tcatcgtcag aagagaggtt      480

gttacacacg ttgttggaaa gttggtagga acggacgtgt ttgtatgcgt gtttgtacat      540

aactcacctg cttcatttca ctgagaaaca ggacttatta acataaacta aacaccaaat      600

gatctggcgg ctccgtcctg cctacgcagg caaggcgaag tttctgtcta tatacgcgca      660

cgattctcat cgatcttatc gccttgtgat gatgatgatc atcatcatcc agtgtacaac      720

ctcaaagcca taacgtctag aatattaagt agcattt                               757


<210>  16
<211>  730
<212>  DNA
<213>  Alvinella pompejana


<220>
<221>  misc_feature
<222>  (142)..(142)
<223>  n is a, c, g, or t

<400>  16
tcacattgtg gacgaggatg aaagcgaaca agacatcgaa gtagaccaag cacgtgaccg       60

ggagataatc catttgaagg agcgcgatag tgatgaatat tcattacttg tcttcgattt      120

caagcagaat ctcggagcca tntacgacga tcttaccgga tcgtgttacg tcatgggtgg      180

ccttgacagc agtctgccag acagcgtaca tatacagcga ttgcttgaaa gcaagactga      240

tggcaatgac atcgtgaagg aactcgacta caccgtcaac tctgaacgtc cactgagaga      300

tctgagcctg attccagccg agctccagac gttgtgttgg ggaaaacctg ccttctggat      360

cagtaagact ctaaccgaag acaaaggttc tcatcgtcag aagagaggtt gttacacacg      420

ttgttggaaa gttggtagga acggacgtgt ttgtatgcgt gtttgtacat aactcacctg      480

cttcatttca ctgagaaaca ggacttatta acataaacta aacaccaaat gatctggcgg      540

ctccgtcctg cctacgcagg caaggcgaag tttctgtcta tatacgcgca cgattctcat      600

cgatcttatc gccttgtgat gatgatgatc atcatcatcc agtgtacaac ctcaaagcca      660

taacgtcaga atattaagta gcatttgtag gcttttcttt ctaataaaat catgatagtt      720

tccaaaaaaa                                                             730


<210>  17
<211>  652
<212>  DNA
<213>  Alvinella pompejana

<400>  17
ggagcgcgat agtgatgaat attcattact tgtcttcgat ttcaagcaga atctcggagc       60

catttacgac gatcttaccg gatcgtgtta cgtcatgggt ggccttgaca gcagtctgcc      120

agacagcgta catatacagc gattgcttga aagcaagact gatggcaatg acatcgtgaa      180

ggaactcgac tacaccgtca actctgaacg tccactgaga gatctgagcc tgattccagc      240

cgagctccag acgttgtgtt ggggaaaacc tgccttctgg atcagtaaga ctctaaccga      300

agacaaaggt tctcatcgtc agaagagagg ttgttacaca cgttgttgga aagttggtag      360

gaacggacgt gtttgtatgc gtgtttgtac ataactcacc tgcttcattt cactgagaaa      420

caggacttat taacataaac taaacaccaa atgatctggc ggctccgtcc tgcctacgca      480

ggcaaggcga agtttctgtc tatatacgcg cacgattctc atcgatctta tcgccttgtg      540

atgatgatga tcatcatcat ccagtgtaca acctcaaagc cataacgtca gaatattaag      600

tagcatttgt aggcttttct ttctaataaa atcatgatag tttccaaaaa aa              652


<210>  18
<211>  602
<212>  DNA
<213>  Alvinella pompejana

<400>  18
gccatttacg acgatcttac cggatcgtgt tacgtcatgg gtggccttga cagcagtctg       60

ccagacagcg tacatataca gcgattgctt gaaagcaaga ctgatggcaa tgacatcgtg      120

aaggaactcg actacaccgt caactctgaa cgtccactga gagatctgag cctgattcca      180

gccgagctcc agacgttgtg ttggggaaaa cctgccttct ggatcagtaa gactctaacc      240

gaagacaaag gttctcatcg tcagaagaga ggttgttaca cacgttgttg gaaagttggt      300

aggaacggac gtgtttgtat gcgtgtttgt acataactca cctgcttcat ttcactgaga      360

aacaggactt attaacataa actaaacacc aaatgatctg gcggctccgt cctgcctacg      420

caggcaaggc gaagtttctg tctatatacg cgcacgattc tcatcgatct tatcgccttg      480

tgatgatgat gatcatcatc atccagtgta caacctcaaa gccataacgt ctagaatatt      540

aagtagcatt tgtaggcttt tctttctaat aaaatcatga tagtttccaa gccttaaaaa      600

aa                                                                     602


<210>  19
<211>  715
<212>  DNA
<213>  Alvinella pompejana

<400>  19
ggaaagcgaa caagacatcg aagtagacca agcacgtgac cgggagataa tccatttgaa       60

ggagcgcgat agtgatgaat attcattact tgtcttcgat ttcaagcaga atctcggagc      120

catttacgac gatcttaccg gatcgtgtta cgtcatgggt ggccttgaca gcagtctgcc      180

agacagcgta catatacagc gattccttga aagcaagact gatggcaatg acatcgtgaa      240

ggaactcgac tacaccgtca actctgaacg tccactgaga gatctgagcc tgattccagc      300

cgagctccag acgttgtgtt ggggaaaacc tgccttctgg atcagtaaga ctctaaccga      360

agacaaaggt tctcatcgtc agaagagagg ttgttacaca cgttgttgga aagttggtag      420

gaacggacgt gtttgtatgc gtgtttgtac ataactcacc tgcttcattt cactgagaaa      480

caggacttat taacataaac taaacaccaa atgatctggc ggctccgtcc tgcctacgca      540

ggcaaggcga agtttctgtc tatatacgcg cacgattctc atcgatctta tcgccttgtg      600

atgatgatga tcatcatcat ccagtgtaca acctcaaagc cataacgtca gaatattaag      660

tagcatttgt aggcttttct ttctaataaa atcatgatag tttcccctaa aaaaa           715


<210>  20
<211>  709
<212>  DNA
<213>  Alvinella pompejana


<220>
<221>  misc_feature
<222>  (62)..(62)
<223>  n is a, c, g, or t

<400>  20
agacgatgaa accgaacaag acatcgaagt agacgaggca cgtgaccggg agataatcca       60

tntgaaggag cgcgatagtg atgaatattc attacttgtc ttcgatttca agcagaatct      120

cggagccatt tacgacgatc ttaccggatc gtgttacgtc atgggtggcc ttgacagcag      180

tctgccagac agcgtacata tacagcgatt gcttgaaagc aagactgatg acaatgacat      240

cgtgaaggaa ctcgattaca ccgtcaactc tgaacgtcca ctgagagatc tgagcctgat      300

tccagccgag ctccagacgt tgtgttgggg aaagcctgtc ttctggatca gtaagactct      360

aaccgaagac aaaggttctc atcgtcagaa gagaggttgt tacacacgtt gttggaaagt      420

tggtaggaac ggacgtgttt gtatgcgtgt ttgtacataa ctcacctgct tcatttcact      480

gagaaacagg acttattaac ataaactaaa caccaaatga tctggcggct ccgtcctagc      540

cttccccagc aaggcgaagt tcctgtctat atacgcgcac ggttctcatc gatcttatcg      600

ccttgtgatg atgatgatcc agtgaacaac ctcaaagcca tagtctagaa tattaagtag      660

catttgtagg cttttctttc taataaaatc gtaatagttt ccaaaaaaa                  709


<210>  21
<211>  754
<212>  DNA
<213>  Alvinella pompejana


<220>
<221>  misc_feature
<222>  (54)..(54)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (143)..(143)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (166)..(166)
<223>  n is a, c, g, or t

<400>  21
ggagcgcttt ctacaaaagg tttatcacat tgtggacgat gatgaaacga acanagacat       60

cgaagtagac caagcacgtg accgggagat aatccatttg aaggagcgcg atagtgatga      120

atattcatta cttgtcttcg atntcaagca gaatctcgga gccatntacg acgatcttac      180

cggatcgtgt tacgtcatgg gtggccttga cagtagtttg ccagacagtg tacatataca      240

gcaattgctt gaaaacaaga ctgatggcaa tgacatcgtg aaggaactcg attacaccgt      300

caactctgaa cgtccactga gagatctgag cctgattcca gccgagctcc agacgttgtg      360

ttggggaaag cctgtcttct ggatcagtaa gactctaacc gaagacaaag gttttcatcg      420

tcagaagaga ggttgttaca cacgttgttg gaaagttggt aggaacggac gtgtttgtat      480

gcgtgtttgt acataactca cctgcttcat ttcactgaga aacaggactt attaacataa      540

actaaacacc aaatgatctg gcggctccgt cctgcctacg caggcaaggc gaagttcctg      600

tctatatacg cgcacgattc tcatcgatct tatcgccttg tgatgatgat gatcatcatc      660

atccagtgta caacctcaaa gccataacgt cagaatatta agtagcattt gtaggctttt      720

ctttctaata aaatcgtgat agtttccaaa aaaa                                  754


<210>  22
<211>  761
<212>  DNA
<213>  Alvinella pompejana

<400>  22
aaggagcgct ttcctacaaa ggtttatcac attgtggacg atgatgaaac cgaacaagac       60

atcgaagtag accaagcacg tgaccgggag ataatccatt cgaaggagcg cgatagtgat      120

gaatattcat tacttgtctt cgatttcaag cagaatctcg gagccattta cgacgatctt      180

accggatcgt gttacgtcat gggtggcctt gacagtagtt tgccagacag tgtacatata      240

cagcaattgc ttgaaaacaa gactgatggc aatgacatcg tgaaggaact cgattacacc      300

gtcaactctg aacgtccact gagagatctg agcctgattc cagccgagct ccagacgttg      360

tgttggggaa agcctgtctt ctggatcagt aagactctaa ccgaagacaa aggttttcat      420

cgtcagaaga gaggttgtta cacacgttgt tggaaagttg gtaggaacgg acgtgtttgt      480

atgcgtgttt gtacataact cacctgcttc atttcactga gaaacaggac ttattaacat      540

aaactaaaca ccaaatgatc tggcggctcc gtcctgccta cgcaggcaag gcgaagttcc      600

tgtctatata cgcgcacgat tctcatcgat cttatcgcct tgtgatgatg atgatcatca      660

tcatccagtg tacaacctca aagccataac gtcagaatat taagtagcat ttgtaggctt      720

ttctttctaa taaaatcgtg atagtttccg ggctaaaaaa a                          761


<210>  23
<211>  743
<212>  DNA
<213>  Alvinella pompejana

<400>  23
aaggtttatc acattgtgga cgatgatgaa accgaacaag acatcgaagt agaccaagca       60

cgtgaccggg agataatcca tttgaaggag cgcgatagtg atgaatattc attacttgtc      120

ttcgatttca agcagaatct cggagccatt tacgacgatc ttaccggatc gtgttacgtc      180

atgggtggcc ttgacagtag tttgccagac agtgtacata tacagcaatt gcttgaaaac      240

aagactgatg gcaatgacat cgtgaaggaa ctcgattaca ccgtcaactc tgaacgtcca      300

ctgagagatc tgagcctgat tccagccgag ctccagacgt tgtgttgggg aaagcctgtc      360

ttctggatca gtaagactct aaccgaagac aaaggttttc atcgtcagaa gagaggttgt      420

tacacacgtt gttggaaagt tggtaggaac ggacgtgttt gtatgcgtgt ttgtacataa      480

ctcacctgct tcatttcact gagaaacagg acttattaac ataaactaaa caccaaatga      540

tctggcggct ccgtcctgcc tacgcaggca aggcgaagtt cctgtctata tacgcgcacg      600

attctcatcg atcttatcgc cttgtgatga tgatgatcat catcatccag tgtacaacct      660

caaagccata acgtcagaat attaagtagc atttgtaggc ttttctttct aataaaatcg      720

tgatagtttc cgggctaaaa aaa                                              743


<210>  24
<211>  704
<212>  DNA
<213>  Alvinella pompejana


<220>
<221>  misc_feature
<222>  (112)..(112)
<223>  n is a, c, g, or t

<400>  24
gacatcgaag tagacgaggc acgtgacccg ggagataatc catttgaagg agcgcgatag       60

tgatgaatat tcattacttg tcttcgattt caagcagaat ctcggagcca tntacgacga      120

tcttaccgga tcgtgttacg tcatgggtgg ccttgacagc agtctgccag acagcgtaca      180

tatacagcga ttgcttgaaa gcaagactga tggcaatgac atcgtgaagg aactcgacta      240

caccgtcaac tctgaacgtc cactgagaga tctgagcctg attccagccg agctccagac      300

gttgtgttgg ggaaaacctg ccttctggat cagtaagact ctaaccgaag acaaaggttc      360

tcatcgtcag aagagaggtt gttacacacg ttgttggaaa gttggtagga acggacgtgt      420

ttgtatgcgt gtttgtacat aactcacctg cttcatttca ctgagaaaca ggacttatta      480

acataaacta aacaccaaat gatctggcgg ctccgtcctg cctacgcagg caaggcgaag      540

tttctgtcta tatacgcgca cgattctcat cgatcttatc gccttgtgat gatgatgatc      600

atcatcatcc agtgtacaac ctcaaagcca taacgtctag aatattaagt agcatttgta      660

ggcttttctt tctaataaaa tcatgatagt ttccgctaaa aaaa                       704


<210>  25
<211>  776
<212>  DNA
<213>  Alvinella pompejana


<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  n is a, c, g, or t

<400>  25
agtntatgtt aataagtcca gtttctcagt gaaatgaagc aggtgagtta tgtacaaaca       60

cgcatacaaa cacgtccgtt cctaccaact gtccaacaac gtgtgtaaca acctctcttc      120

tgacgatgaa aacctttgtc ttcggttaga gtcttactga tccagaagac aggctttccc      180

caacacaacg tttggagctc ggctggaatc aggctcagat ctctcagtgg acgttcagag      240

ttgacggtgt aatcgagttc cttcacgatg tcattgccat cagtcttgtt ttcaagcaat      300

tgccgtatat gtacactgtc tggcaaacta ctgtcaaggc cacccatgac gtaacacgat      360

ccggtaagat cgtcgtaaat ggctccgaga ttctgcttga aatcgaagac aagtaatgaa      420

tattcatcac tatcgcgctc cttcaaatgg attatctccc ggtcacgtgc ttggtctact      480

tcgatgtctt gttcggtttc atcatcgtcc acaatgtgat aaacctttgt aggaaagcgc      540

tcctcttctt cacgcatcag gggttcaatc gaagtatgcg ggcgttgcat ttctgcagct      600

gccgttccat atgcagacta ccgaagacga caagaaacac taggaccagc gtcacaacta      660

cagaatacgt catcagtccc catgacatca tggtcgtctt ctgcgacttg gttacaagac      720

cttctttgtc gtaaggtgcc ggcgtacagt ccattgcctc tgcttgtctc tcagca          776


