                         SEQUENCE LISTING

<110>  Oregon Health and Science University
       Alumkal, Joshi
 
<120>  DETECTION OF DNA METHYLATION OF TAL1, ERG, AND/OR CD40 TO DIAGNOSE 
       PROSTATE CANCER

<130>  899-83933-03

<150>  US 61/277,523
<151>  2009-09-24

<150>  US 61/364,346
<151>  2010-07-14

<160>  11    

<170>  PatentIn version 3.5

<210>  1
<211>  56
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide TAL1 probe

<400>  1
tcacacatcg aagtcttgga ttaactgcga aggcctcctt ctatttgccg cggctt           56


<210>  2
<211>  50
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide CD40 probe

<400>  2
ggaacttcct caggcctctc cgcagtggag cctctttcgg ttctgccagg                  50


<210>  3
<211>  48
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide ERG probe

<400>  3
aaaatccagc ttacctgagc gccgctcctc ttctctcatg tccctcgg                    48


<210>  4
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide ERG methylated sense primer

<400>  4
tgcgtcggtt agattaggtc gc                                                22


<210>  5
<211>  17
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide ERG methylated antisense primer

<400>  5
gtcgcgcaaa acgtccg                                                      17


<210>  6
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide ERG unmethylated sense primer

<400>  6
ttattgtgtg tgttggttag attaggttgt                                        30


<210>  7
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide ERG unmethylated antisense primer

<400>  7
actaaaacaa catcacacaa aacatcca                                          28


<210>  8
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide ERG RT-PCR sense primer

<400>  8
cagcgtcctc agttagatcc t                                                 21


<210>  9
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide ERG RT-PCR antisense primer

<400>  9
cgaacttgta ggcgtagcg                                                    19


<210>  10
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide beta-actin RT-PCR sense primer

<400>  10
ttccttcctg ggcatggagt                                                   20


<210>  11
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide beta-actin RT-PCR antisense primer

<400>  11
tcttcattgt gctgggtgcc                                                   20


