                         SEQUENCE LISTING

<110>  Cornell University
       Jaffrey, Samie R.
       Paige, Jeremy S.
 
<120>  COUPLED RECOGNITION/DETECTION SYSTEM FOR IN VIVO AND IN VITRO USE

<130>  19603-6211

<150>  61/207,897
<151>  2009-02-18

<160>  62    

<170>  PatentIn version 3.5

<210>  1
<211>  114
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer 3-6, binds to DMHBI

<400>  1
gggagauacg cucuagaauu caauugcaug guggucuggg acagacgugu ggacggcaca       60

cagcgugagg cuuugguggg uuauggcugu caugcgagau agcucgagca augc            114


<210>  2
<211>  69
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer 13-2, binds to DMHBI

<400>  2
gggcuauuuc uggaggggcg cuacaugaaa guggugguug ggugcggucg gagauagcuc       60

gagcaaugc                                                               69


<210>  3
<211>  60
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer 13-2 min, binds to DMHBI

<400>  3
gggcuauuuc uggaggggcg cuacaugaaa guggugguug ggugcggucg gagauagcuc       60


<210>  4
<211>  72
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer 2-4, binds to DMHBI

<400>  4
ugaaaccuag aguuaugcca ggcucugagc cugcuucggc aggugcuaug aucgccagcg       60

guaugcaguc cg                                                           72


<210>  5
<211>  72
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer 4-19, binds to DMHBI


<220>
<221>  misc_feature
<222>  (27)..(27)
<223>  N is C or U

<400>  5
ugaaaugaca guacagugga gggugcngua cugcuucggc agggaagggg cgcuguucuu       60

gucucauauc cg                                                           72


<210>  6
<211>  72
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer 17-3, binds to DMHBI


<220>
<221>  misc_feature
<222>  (28)..(28)
<223>  N is C or U

<400>  6
ugaagagcag uagcgaguag uucacaanag cugcuucggc aggaucuugu aggaaguaaa       60

ugugcaaauc cg                                                           72


<210>  7
<211>  74
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer 17-17, binds to DMHBI


<220>
<221>  misc_feature
<222>  (6)..(7)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (22)..(22)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (26)..(27)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (45)..(45)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (57)..(57)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (61)..(61)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (64)..(64)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (67)..(67)
<223>  N is C or U

<400>  7
ugaaannaaa uauucgggau anauannauu acugcuucgg caganagcgg uuaauunuug       60

naanucnaau cccg                                                         74


<210>  8
<211>  73
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer 18-16, binds to DMHBI


<220>
<221>  misc_feature
<222>  (5)..(5)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (19)..(19)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (29)..(29)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (53)..(53)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (67)..(67)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (69)..(69)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (72)..(72)
<223>  N is C or U

<400>  8
ugaanggacu cgucuggcng gaugggcgng ugguacugcu uucgggcagg aunggguaua       60

acgguanang cnc                                                          73


<210>  9
<211>  72
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer 23-7, binds to DMHBI

<400>  9
ugaaaugaca guacagugga gggugcggua cugcuucggc agggaagggg cgcuguucuu       60

gucucauauc cg                                                           72


<210>  10
<211>  104
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer 23-11, binds to DMHBI

<400>  10
gggagacgca acugaaugaa augacaguac aguggagggu gcgguacugc uucggcaggg       60

aaggggcgcu guucuugucu cauauccgua acuagucgcg ucac                       104


<210>  11
<211>  109
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer 12-2-1, binds to DMHBI

<400>  11
ggguauccgg aaucuuauac auuguuaugu cuggaggggc gccgcaugaa cgcgguggug       60

aggugcgguc ggauauaacu gguggagugc aagagucuga gcacacugg                  109


<210>  12
<211>  109
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer 13-2-3, binds to DMHBI

<400>  12
ggguauccgg aaucuuauac auugcuauuu cuggaggggc gccccaugaa aggggugguu       60

gagagcgguc ggagauagcg gaaacagugc aagagucuga gcacacugg                  109


<210>  13
<211>  109
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer 13-2-4, binds to DMHBI

<400>  13
ggguauccgg aaucuuauac auugcuauug uuggaggggc gcuacgugaa agugguggua       60

cggugcgguc ggcaauagcu cguauagugc aagagucuga gcacacugg                  109


<210>  14
<211>  109
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer 13-2-5, binds to DMHBI

<400>  14
ggguauccgg aaucuuauac auugcucugu uuggaggggc gcuacuuuca aguagugguu       60

gagugcgguc gaacagagcu ugggcguugc aagagucuga gcacacugg                  109


<210>  15
<211>  97
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer 13-2-5-min, binds to DMHBI

<400>  15
ggguauccgg aaucuuauac auugcucugu uuggaggggc gcuacuuuca aguagugguu       60

gagugcgguc gaacagagcu ugggcguugc aagaguc                                97


<210>  16
<211>  106
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer 24-4, binds to DFHBI

<400>  16
gggagacgca acugaaugaa cgggguaaau aggcgugggu cggguccugc uucggcaguu       60

gagugugaga gcgaacucug uaguuccgcg uaacuagucg cgucac                     106


<210>  17
<211>  106
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer 24-1, binds to DFHBI

<400>  17
gggagacgca acugaaugaa ccuguagaac gacuuggucg ggucagcugc uucggcagcu       60

ucgagaauag aguguggggu cguauccgcg uaacuagucg cgucac                     106


<210>  18
<211>  106
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer 24-2, binds to DFHBI

<400>  18
gggagacgca acugaaugaa auggugaagg acggguccag guguggcugc uucggcagug       60

cagcuuguug aguagagugu gagcuccgcg uaacuagucg cgucac                     106


<210>  19
<211>  76
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer 10-6, binds to DFHBI

<400>  19
ugaaugaacg ggguaaauag gcgugggucg gguccugcuu cggcaguuga gugugagagc       60

gaacucugua guuccg                                                       76


<210>  20
<211>  72
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer J2-6, binds to o-HBI


<220>
<221>  misc_feature
<222>  (25)..(25)
<223>  N is C or U

<400>  20
ugaaaauggc aaaauauucg agaancuggu cugcuucggc aggauucucc aagggguaga       60

ucguguauuc cg                                                           72


<210>  21
<211>  72
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer J2-18, binds to o-HBI


<220>
<221>  misc_feature
<222>  (10)..(12)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (15)..(15)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (20)..(20)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (22)..(22)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (24)..(24)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (28)..(28)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (45)..(45)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (47)..(47)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (55)..(55)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (60)..(61)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (64)..(64)
<223>  N is C or U

<400>  21
ugaaaaugun nnauncgagn cngnauunag cugcuucggc agaangnucu cccanagcun       60

nugncaaauc cg                                                           72


<210>  22
<211>  73
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer S8-9, binds to o-HBI


<220>
<221>  misc_feature
<222>  (24)..(24)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (27)..(27)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (29)..(30)
<223>  N is C or U

<400>  22
ugaaaaugua uagucggaug ugcnganunn acugcuucgg cagcuuagau guaugcagcu       60

gcucgggagu ccg                                                          73


<210>  23
<211>  72
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer S8-20, binds to o-HBI

<400>  23
ugaaucuccg ugucagggca gagcagggcg cugcuucggc agauaaugua uagucgggau       60

cgcugaacuc cg                                                           72


<210>  24
<211>  72
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer N19-4, binds to DMABI


<220>
<221>  misc_feature
<222>  (23)..(23)
<223>  N is C or U

<400>  24
ugaacgaaua gguggagguu gcncuguuuu cugcuucggc agguuaaaga uugguacuca       60

ucacgguguc cg                                                           72


<210>  25
<211>  72
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer N19-10, binds to DMABI

<400>  25
ugaacaguuu cgugcaguuu gaaauguagg cugcuucggc aggauaggug uggaggugga       60

uguccggguc cg                                                           72


<210>  26
<211>  73
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer N9-1, binds to DMABI


<220>
<221>  misc_feature
<222>  (28)..(28)
<223>  n is a, c, g, or u

<400>  26
ugaacccuga aaagagggaa ggccuggnuu gcugcuucgg caggggauug aucagggugc       60

acguugcugu ccg                                                          73


<210>  27
<211>  72
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer N9-6, binds to DMABI

<400>  27
ugaagccuug aaauaguagu gaucgagugg cugcuucggc agacucugag uguggcuaua       60

cgugaucguc cg                                                           72


<210>  28
<211>  72
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer N11-3, binds to DMABI


<220>
<221>  misc_feature
<222>  (17)..(17)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (24)..(24)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (26)..(26)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (30)..(30)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (56)..(57)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (60)..(60)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (66)..(66)
<223>  N is C or U

<400>  28
ugaaaaagug guauuunaaa uucnanuuan cugcuucggc agacgacggg ggggcnngun       60

uuggangauc cg                                                           72


<210>  29
<211>  75
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer N15-1, binds to DMABI


<220>
<221>  misc_feature
<222>  (8)..(8)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (19)..(19)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (23)..(23)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (27)..(27)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (62)..(62)
<223>  N is C or U

<220>
<221>  misc_feature
<222>  (69)..(69)
<223>  N is C or U

<400>  29
ugaaugungc auaauugang gangauncau gcugcuucgg caguugggug uaaaaaugga       60

angaggucnu auccg                                                        75


<210>  30
<211>  72
<212>  RNA
<213>  Artificial

<220>
<223>  Aptamer N8-4, binds to DMABI


<220>
<221>  misc_feature
<222>  (23)..(24)
<223>  N is C or U

<400>  30
ugaauccagg gguggucggu ggnnggagcg cugcuucggc agugagcugg ggaguucagu       60

caaugugguc cg                                                           72


<210>  31
<211>  163
<212>  RNA
<213>  Artificial

<220>
<223>  bivalent ATP sensor, binds to DMHBI

<400>  31
gggagacgca acugaaugaa ccuguagaac gacuuggucg ggucagugug uggggagauc       60

uacggaucuc agggcuguua cgggagcuac auggaaggag uccauguguc guaugcuucg      120

agaauagagu guggggucgu auccgcguaa cuagucgcgu cac                        163


<210>  32
<211>  118
<212>  RNA
<213>  Artificial

<220>
<223>  bivalent adenosine sensor, binds to DMHBI

<400>  32
cgcaacugaa ugaaccugua gaacgacuug gucgggucag cugcggaaga aacuguggca       60

cuucggugcc agguagcuuc gagaauagag uguggggucg uauccguaac caguugcg        118


<210>  33
<211>  126
<212>  RNA
<213>  Artificial

<220>
<223>  bivalent cGMP sensor, binds to DMHBI

<400>  33
gggagacgca acugaaugaa ccuguagaac gacuuggucg ggucagcccu gcgaugcaga       60

aaggugcuga cgacacaucu ucgagaauag aguguggggu cguauccgcg uaacuagucg      120

cgucac                                                                 126


<210>  34
<211>  114
<212>  DNA
<213>  Artificial

<220>
<223>  clone 3-6

<400>  34
gggagatacg ctctagaatt caattgcatg gtggtctggg acagacgtgt ggacggcaca       60

cagcgtgagg ctttggtggg ttatggctgt catgcgagat agctcgagca atgc            114


<210>  35
<211>  113
<212>  DNA
<213>  Artificial

<220>
<223>  clone 13-2

<400>  35
gggagatacg ctctagaatt caatttgcgt attgagacag ggccgcgcta tttctggagg       60

ggcgctacat gaaagtggtg gttgggtgcg gtcggagata gctcgagcaa tgc             113


<210>  36
<211>  60
<212>  DNA
<213>  Artificial

<220>
<223>  13-2-min coding sequence

<400>  36
gggctatttc tggaggggcg ctacatgaaa gtggtggttg ggtgcggtcg gagatagctc       60


<210>  37
<211>  109
<212>  DNA
<213>  Artificial

<220>
<223>  clone 13-2-1

<400>  37
gggtatccgg aatcttatac attgttatgt ctggaggggc gccgcatgaa cgcggtggtg       60

aggtgcggtc ggatataact ggtggagtgc aagagtctga gcacactgg                  109


<210>  38
<211>  109
<212>  DNA
<213>  Artificial

<220>
<223>  clone 13-2-3

<400>  38
gggtatccgg aatcttatac attgctattt ctggaggggc gccccatgaa aggggtggtt       60

gagagcggtc ggagatagcg gaaacagtgc aagagtctga gcacactgg                  109


<210>  39
<211>  109
<212>  DNA
<213>  Artificial

<220>
<223>  clone 13-2-4

<400>  39
gggtatccgg aatcttatac attgctattg ttggaggggc gctacgtgaa agtggtggta       60

cggtgcggtc ggcaatagct cgtatagtgc aagagtctga gcacactgg                  109


<210>  40
<211>  109
<212>  DNA
<213>  Artificial

<220>
<223>  clone 13-2-5

<400>  40
gggtatccgg aatcttatac attgctctgt ttggaggggc gctactttca agtagtggtt       60

gagtgcggtc gaacagagct tgggcgttgc aagagtctga gcacactgg                  109


<210>  41
<211>  57
<212>  DNA
<213>  Artificial

<220>
<223>  13-2 variable region consensus


<220>
<221>  misc_feature
<222>  (50)..(50)
<223>  N is A, C, T, or G

<220>
<221>  misc_feature
<222>  (57)..(57)
<223>  N is A, C, T, or G

<400>  41
ctatttctgg aggggcgcta catgaaagtg gtggttgggt gcggtcggan atagctn          57


<210>  42
<211>  108
<212>  DNA
<213>  Artificial

<220>
<223>  Clone 10-6

<400>  42
gggagacgca actgaatgaa tgaacggggt aaataggcgt gggtcgggtc ctgcttcggc       60

agttgagtgt gagagcgaac tctgtagttc cgtaactagt cgcgtcac                   108


<210>  43
<211>  106
<212>  DNA
<213>  Artificial

<220>
<223>  Clone 24-1

<400>  43
gggagacgca actgaatgaa cctgtagaac gacttggtcg ggtcagctgc ttcggcagct       60

tcgagaatag agtgtggggt cgtatccgcg taactagtcg cgtcac                     106


<210>  44
<211>  106
<212>  DNA
<213>  Artificial

<220>
<223>  Clone 24-2

<400>  44
gggagacgca actgaatgaa atggtgaagg acgggtccag gtgtggctgc ttcggcagtg       60

cagcttgttg agtagagtgt gagctccgcg taactagtcg cgtcac                     106


<210>  45
<211>  104
<212>  DNA
<213>  Artificial

<220>
<223>  Clone 19-4


<220>
<221>  misc_feature
<222>  (39)..(39)
<223>  N is C or T

<400>  45
gggagacgca actgaatgaa cgaataggtg gaggttgcnc tgttttctgc ttcggcaggt       60

taaagattgg tactcatcac ggtgtccgta actagtcgcg tcac                       104


<210>  46
<211>  104
<212>  DNA
<213>  Artificial

<220>
<223>  Clone 19-10

<400>  46
gggagacgca actgaatgaa cagtttcgtg cagtttgaaa tgtaggctgc ttcggcagga       60

taggtgtgga ggtggatgtc cgggtccgta actagtcgcg tcac                       104


<210>  47
<211>  105
<212>  DNA
<213>  Artificial

<220>
<223>  Clone 9-1


<220>
<221>  misc_feature
<222>  (44)..(44)
<223>  N is C or T

<400>  47
gggagacgca actgaatgaa ccctgaaaag agggaaggcc tggnttgctg cttcggcagg       60

ggattgatca gggtgcacgt tgctgtccgt aactagtcgc gtcac                      105


<210>  48
<211>  104
<212>  DNA
<213>  Artificial

<220>
<223>  Clone 9-6

<400>  48
gggagacgca actgaatgaa gccttgaaat agtagtgatc gagtggctgc ttcggcagac       60

tctgagtgtg gctatacgtg atcgtccgta actagtcgcg tcac                       104


<210>  49
<211>  104
<212>  DNA
<213>  Artificial

<220>
<223>  Clone 11-3


<220>
<221>  misc_feature
<222>  (33)..(33)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (40)..(40)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (42)..(42)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (46)..(46)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (72)..(73)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (76)..(76)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (82)..(82)
<223>  N is C or T

<400>  49
gggagacgca actgaatgaa aaagtggtat ttnaaattcn anttanctgc ttcggcagac       60

gacggggggg cnngtnttgg angatccgta actagtcgcg tcac                       104


<210>  50
<211>  107
<212>  DNA
<213>  Artificial

<220>
<223>  Clone 15-1


<220>
<221>  misc_feature
<222>  (24)..(24)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (35)..(35)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (39)..(39)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (43)..(43)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (78)..(78)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (85)..(85)
<223>  N is C or T

<400>  50
gggagacgca actgaatgaa tgtngcataa ttganggang atncatgctg cttcggcagt       60

tgggtgtaaa aatggaanga ggtcntatcc gtaactagtc gcgtcac                    107


<210>  51
<211>  104
<212>  DNA
<213>  Artificial

<220>
<223>  Clone 8-4


<220>
<221>  misc_feature
<222>  (39)..(40)
<223>  N is C or T

<400>  51
gggagacgca actgaatgaa tccaggggtg gtcggtggnn ggagcgctgc ttcggcagtg       60

agctggggag ttcagtcaat gtggtccgta actagtcgcg tcac                       104


<210>  52
<211>  104
<212>  DNA
<213>  Artificial

<220>
<223>  Clone 2-6


<220>
<221>  misc_feature
<222>  (41)..(41)
<223>  N is C or T

<400>  52
gggagacgca actgaatgaa aatggcaaaa tattcgagaa nctggtctgc ttcggcagga       60

ttctccaagg ggtagatcgt gtattccgta actagtcgcg tcac                       104


<210>  53
<211>  104
<212>  DNA
<213>  Artificial

<220>
<223>  Clone 2-18


<220>
<221>  misc_feature
<222>  (26)..(28)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (31)..(31)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (36)..(36)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (38)..(38)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (40)..(40)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (44)..(44)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (61)..(61)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (63)..(63)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (71)..(71)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (76)..(77)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (80)..(80)
<223>  N is C or T

<400>  53
gggagacgca actgaatgaa aatgtnnnat ncgagncngn attnagctgc ttcggcagaa       60

ngntctccca nagctnntgn caaatccgta actagtcgcg tcac                       104


<210>  54
<211>  105
<212>  DNA
<213>  Artificial

<220>
<223>  Clone 8-9


<220>
<221>  misc_feature
<222>  (40)..(40)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (43)..(43)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (45)..(46)
<223>  N is C or T

<400>  54
gggagacgca actgaatgaa aatgtatagt cggatgtgcn gantnnactg cttcggcagc       60

ttagatgtat gcagctgctc gggagtccgt aactagtcgc gtcac                      105


<210>  55
<211>  104
<212>  DNA
<213>  Artificial

<220>
<223>  Clone 8-20

<400>  55
gggagacgca actgaatgaa tctccgtgtc agggcagagc agggcgctgc ttcggcagat       60

aatgtatagt cgggatcgct gaactccgta actagtcgcg tcac                       104


<210>  56
<211>  94
<212>  RNA
<213>  Artificial

<220>
<223>  24-1 derived aptamer, sensor scaffold

<400>  56
cgcaacugaa ugaaccugua gaacgacuug gucgggucag cugcuucggc agcuucgaga       60

auagagugug gggucguauc cguaaccagu ugcg                                   94


<210>  57
<211>  104
<212>  DNA
<213>  Artificial

<220>
<223>  Clone 23-11

<400>  57
gggagacgca actgaatgaa atgacagtac agtggagggt gcggtactgc ttcggcaggg       60

aaggggcgct gttcttgtct catatccgta actagtcgcg tcac                       104


<210>  58
<211>  104
<212>  DNA
<213>  Artificial

<220>
<223>  Clone 17-3


<220>
<221>  misc_feature
<222>  (44)..(44)
<223>  N is C or T

<400>  58
gggagacgca actgaatgaa gagcagtagc gagtagttca caanagctgc ttcggcagga       60

tcttgtagga agtaaatgtg caaatccgta actagtcgcg tcac                       104


<210>  59
<211>  104
<212>  DNA
<213>  Artificial

<220>
<223>  Clone 2-4

<400>  59
gggagacgca actgaatgaa acctagagtt atgccaggct ctgagcctgc ttcggcaggt       60

gctatgatcg ccagcggtat gcagtccgta actagtcgcg tcac                       104


<210>  60
<211>  105
<212>  DNA
<213>  Artificial

<220>
<223>  Clone 17-17


<220>
<221>  misc_feature
<222>  (22)..(23)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (38)..(38)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (42)..(43)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (61)..(61)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (73)..(73)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (77)..(77)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (80)..(80)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (83)..(83)
<223>  N is C or T

<400>  60
gggagacgca actgaatgaa annaaatatt cgggatanat annattactg cttcggcaga       60

nagcggttaa ttnttgnaan tcnaatcccg aactagtcgc gtcac                      105


<210>  61
<211>  105
<212>  DNA
<213>  Artificial

<220>
<223>  Clone 18-16


<220>
<221>  misc_feature
<222>  (21)..(21)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (35)..(35)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (45)..(45)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (69)..(69)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (83)..(83)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (85)..(85)
<223>  N is C or T

<220>
<221>  misc_feature
<222>  (88)..(88)
<223>  N is C or T

<400>  61
gggagacgca actgaatgaa nggactcgtc tggcnggatg ggcgngtggt actgctttcg       60

ggcaggatng ggtataacgg tanangcnct aactagtcgc gtcac                      105


<210>  62
<211>  98
<212>  RNA
<213>  Artificial

<220>
<223>  Bivalent ATP sensor, binds DMHBI

<400>  62
cuauuucugg aggggcgcua cuguguggga agaaacugug gcacuucggu gccagcguau       60

gggugguugg gugcggucgg agauagcucg agcaaugc                               98


