                               SEQUENCE LISTING

<110> JOULE BIOTECHNOLOGIES, INC.
 
<120> METHODS AND COMPOSITIONS FOR PRODUCING CARBON-BASED PRODUCTS 
      OF INTEREST IN MICRO-ORGANISMS

<130> 26139-16068 PCT

<140> PCT/US2009/058467
<141> 2009-09-25

<150> 61/100,656
<151> 2008-09-26

<150> 61/100,660
<151> 2008-09-26

<150> 61/100,663
<151> 2008-09-26

<150> 61/100,665
<151> 2008-09-26

<150> 61/100,667
<151> 2008-09-26

<150> 61/117,925
<151> 2008-11-25

<150> 61/117,928
<151> 2008-11-25

<150> 61/117,930
<151> 2008-11-25

<160> 24    

<170> PatentIn version 3.5

<210> 1
<211> 888
<212> DNA
<213> Acinetobacter baylyi

<400> 1
atgaacaaaa aacttgaagc tctcttccga gagaatgtaa aaggtaaagt ggctttgatc       60

actggtgcat ctagtggaat cggtttgacg attgcaaaaa gaattgctgc ggcaggtgct      120

catgtattat tggttgcccg aacccaagaa acactggaag aagtgaaagc tgcaattgaa      180

cagcaagggg gacaggcctc tatttttcct tgtgacctga ctgacatgaa tgcgattgac      240

cagttatcac aacaaattat ggccagtgtc gatcatgtcg atttcctgat caataatgca      300

gggcgttcga ttcgccgtgc cgtacacgag tcgtttgatc gcttccatga ttttgaacgc      360

accatgcagc tgaattactt tggtgcggta cgtttagtgt taaatttact gccacatatg      420

attaagcgta aaaatggcca gatcatcaat atcagctcta ttggtgtatt ggccaatgcg      480

acccgttttt ctgcttatgt cgcgtctaaa gctgcgctgg atgccttcag tcgctgtctt      540

tcagccgagg tactcaagca taaaatctca attacctcga tttatatgcc attggtgcgt      600

accccaatga tcgcacccac caaaatttat aaatacgtgc ccacgctttc cccagaagaa      660

gccgcagatc tcattgtcta cgccattgtg aaacgtccaa cacgtattgc gacgcacttg      720

ggtcgtctgg cgtcaattac ctatgccatc gcaccagaca tcaataatat tctgatgtcg      780

attggattta acctattccc aagctcaacg gctgcactgg gtgaacagga aaaattgaat      840

ctgctacaac gtgcctatgc ccgcttgttc ccaggcgaac actggtaa                   888


<210> 2
<211> 295
<212> PRT
<213> Acinetobacter baylyi

<400> 2
Met Asn Lys Lys Leu Glu Ala Leu Phe Arg Glu Asn Val Lys Gly Lys 
1               5                   10                  15      


Val Ala Leu Ile Thr Gly Ala Ser Ser Gly Ile Gly Leu Thr Ile Ala 
            20                  25                  30          


Lys Arg Ile Ala Ala Ala Gly Ala His Val Leu Leu Val Ala Arg Thr 
        35                  40                  45              


Gln Glu Thr Leu Glu Glu Val Lys Ala Ala Ile Glu Gln Gln Gly Gly 
    50                  55                  60                  


Gln Ala Ser Ile Phe Pro Cys Asp Leu Thr Asp Met Asn Ala Ile Asp 
65                  70                  75                  80  


Gln Leu Ser Gln Gln Ile Met Ala Ser Val Asp His Val Asp Phe Leu 
                85                  90                  95      


Ile Asn Asn Ala Gly Arg Ser Ile Arg Arg Ala Val His Glu Ser Phe 
            100                 105                 110         


Asp Arg Phe His Asp Phe Glu Arg Thr Met Gln Leu Asn Tyr Phe Gly 
        115                 120                 125             


Ala Val Arg Leu Val Leu Asn Leu Leu Pro His Met Ile Lys Arg Lys 
    130                 135                 140                 


Asn Gly Gln Ile Ile Asn Ile Ser Ser Ile Gly Val Leu Ala Asn Ala 
145                 150                 155                 160 


Thr Arg Phe Ser Ala Tyr Val Ala Ser Lys Ala Ala Leu Asp Ala Phe 
                165                 170                 175     


Ser Arg Cys Leu Ser Ala Glu Val Leu Lys His Lys Ile Ser Ile Thr 
            180                 185                 190         


Ser Ile Tyr Met Pro Leu Val Arg Thr Pro Met Ile Ala Pro Thr Lys 
        195                 200                 205             


Ile Tyr Lys Tyr Val Pro Thr Leu Ser Pro Glu Glu Ala Ala Asp Leu 
    210                 215                 220                 


Ile Val Tyr Ala Ile Val Lys Arg Pro Thr Arg Ile Ala Thr His Leu 
225                 230                 235                 240 


Gly Arg Leu Ala Ser Ile Thr Tyr Ala Ile Ala Pro Asp Ile Asn Asn 
                245                 250                 255     


Ile Leu Met Ser Ile Gly Phe Asn Leu Phe Pro Ser Ser Thr Ala Ala 
            260                 265                 270         


Leu Gly Glu Gln Glu Lys Leu Asn Leu Leu Gln Arg Ala Tyr Ala Arg 
        275                 280                 285             


Leu Phe Pro Gly Glu His Trp 
    290                 295 


<210> 3
<211> 888
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic polynucleotide

<400> 3
atgaacaaga agctggaggc actgttccgt gagaatgtaa aaggtaaggt agctctgatc       60

accggcgctt cttctggcat cggtctgacc atcgccaaac gtattgcagc tgccggtgcg      120

catgtactgc tggtggcgcg tacccaggag actctggaag aggtgaaagc agcaatcgaa      180

caacagggcg gccaggccag cattttcccg tgtgacctga ctgacatgaa cgcgattgat      240

cagctgtccc agcagattat ggcgtccgtt gatcacgtag attttctgat caacaacgct      300

ggtcgttcca tccgccgtgc agtccacgag agcttcgacc gtttccacga tttcgaacgt      360

actatgcagc tgaattattt cggcgcggta cgcctggtgc tgaatctgct gcctcacatg      420

attaaacgca aaaacggtca aatcatcaac atttcctcta ttggtgttct ggcaaacgcg      480

acccgttttt ccgcttacgt tgccagcaaa gcggccctgg acgcattcag ccgttgtctg      540

tctgccgaag tgctgaagca caaaattagc attactagca tttacatgcc tctggtgcgt      600

accccgatga tcgcgccaac taaaatctac aagtacgttc cgaccctgag cccggaagag      660

gcagcagacc tgatcgtata cgctatcgtt aaacgtccga cccgtattgc aactcacctg      720

ggtcgtctgg cttccatcac ctacgctatc gctccggaca tcaataatat cctgatgtcc      780

atcggcttca atctgttccc gtcctctacg gcggcactgg gtgagcagga gaaactgaac      840

ctgctgcagc gtgcctacgc gcgtctgttc ccgggcgagc actggtaa                   888


<210> 4
<211> 1791
<212> DNA
<213> Trichodesmium erythraeum

<400> 4
atggctaaat actcaacaat actagatatc ctaaaccatc gctcccaaaa tcttcccgac       60

caaatagctt atactttctt gcccgatgga gaaactgagt ctggtcactt aacctatcaa      120

caactaaatg tccaagtacg agcgatcgct gcccacctcc aatcattcat taccctacaa      180

gaccgaatat tagtcattta tccctatacc gctgggctag aatttatcgc cagcttcttt      240

gcttgtatct gtgcaggagc catcgccgtc accagtaacc ctcccctcaa caacgaagct      300

atagccaaac tccaagaaag agtcgactcc tgccaaccaa aagccatcct caccacagaa      360

tcttttttac agcaaattaa aaaaaaatta gcgaaaaatc tagacttagc tcccaaactc      420

aaccagttac cctggatcgc tacagataaa atatcatcct ctgaagctcc aaaatggaaa      480

gaaccaaaaa tagaaccaga caccctcgcc tttttccaat atacctccgg ttccacaggc      540

aaaccaaaag gagtaatggt aactcacagc aatatcttac ataattcaga aattatttat      600

cagtcctttg aacattcagc agaaagtcaa ggggtaattt ggttacccat gttccacgac      660

atgggactaa taggcggagt aatacaacct ctatatggag gttttccagt cactctcatg      720

tcacccgtag ctttaattca aaaacccata cgttggttaa aagcaatttg taaatacaaa      780

gcaacaacta gtgggggacc caactttgct tatgacttag tttctcgtca agtcacccca      840

gaacaactac aaaatttaga cttaagtagt tggagtgtcg cattttctgg agctgaacct      900

gtacgagctg caactttaga aagatttgcc catacttttg caccttgtgg gtttcagcgg      960

gaagcttttt atccttgtta tggaatggca gaaaccactc tatttattag tggtggaaca     1020

aaaacaaaag ctccagttat tcaatatgta gatgctgaag ctttggcaga aaatcgagtt     1080

gtagttggtc gtgaaaacag caagccagtg gttagttgtg gttggggttg gttgggtgat     1140

gaaattgcca tagttgatcc aaaatcttta gctagacgtt cacaggggga agtaggagaa     1200

atttgggtat caggtgctgg tgtaagtaag ggttattggc agcaaccaga agaaacagaa     1260

caaactttta atggtttttt ggcagataaa ggaccttttt tacggacagg agatttagga     1320

tttttacagg atggggaatt atttattact ggtcgaatta aagatgtaat gatcttgtgg     1380

ggtaggtatc gttatcctca agatattgaa ttaactgtgg aaaaatgtca tccagctttg     1440

cggtctggtt gtggagcagc tttttctata gaggcagaag atgatgagcg gttaataatt     1500

attcaggagg tagagcgtag ttatttacga aatttgaatt ttgaggaagt agtgggagct     1560

attcgccagg cagttgctga ggaacatacg gtggaagttt atactattag tttgttgaag     1620

actggtagta ttgccaaaac taccagtggt aagattcaac gtcggttatg tcgcagtcaa     1680

tttttggagg gtactctaaa ttcggttggt aactggcaac ttcaagctga aaagggtagt     1740

gtatctgaat tagccaataa ttctaattat atagatagtg aaaattctta a              1791


<210> 5
<211> 596
<212> PRT
<213> Trichodesmium erythraeum

<400> 5
Met Ala Lys Tyr Ser Thr Ile Leu Asp Ile Leu Asn His Arg Ser Gln 
1               5                   10                  15      


Asn Leu Pro Asp Gln Ile Ala Tyr Thr Phe Leu Pro Asp Gly Glu Thr 
            20                  25                  30          


Glu Ser Gly His Leu Thr Tyr Gln Gln Leu Asn Val Gln Val Arg Ala 
        35                  40                  45              


Ile Ala Ala His Leu Gln Ser Phe Ile Thr Leu Gln Asp Arg Ile Leu 
    50                  55                  60                  


Val Ile Tyr Pro Tyr Thr Ala Gly Leu Glu Phe Ile Ala Ser Phe Phe 
65                  70                  75                  80  


Ala Cys Ile Cys Ala Gly Ala Ile Ala Val Thr Ser Asn Pro Pro Leu 
                85                  90                  95      


Asn Asn Glu Ala Ile Ala Lys Leu Gln Glu Arg Val Asp Ser Cys Gln 
            100                 105                 110         


Pro Lys Ala Ile Leu Thr Thr Glu Ser Phe Leu Gln Gln Ile Lys Lys 
        115                 120                 125             


Lys Leu Ala Lys Asn Leu Asp Leu Ala Pro Lys Leu Asn Gln Leu Pro 
    130                 135                 140                 


Trp Ile Ala Thr Asp Lys Ile Ser Ser Ser Glu Ala Pro Lys Trp Lys 
145                 150                 155                 160 


Glu Pro Lys Ile Glu Pro Asp Thr Leu Ala Phe Phe Gln Tyr Thr Ser 
                165                 170                 175     


Gly Ser Thr Gly Lys Pro Lys Gly Val Met Val Thr His Ser Asn Ile 
            180                 185                 190         


Leu His Asn Ser Glu Ile Ile Tyr Gln Ser Phe Glu His Ser Ala Glu 
        195                 200                 205             


Ser Gln Gly Val Ile Trp Leu Pro Met Phe His Asp Met Gly Leu Ile 
    210                 215                 220                 


Gly Gly Val Ile Gln Pro Leu Tyr Gly Gly Phe Pro Val Thr Leu Met 
225                 230                 235                 240 


Ser Pro Val Ala Leu Ile Gln Lys Pro Ile Arg Trp Leu Lys Ala Ile 
                245                 250                 255     


Cys Lys Tyr Lys Ala Thr Thr Ser Gly Gly Pro Asn Phe Ala Tyr Asp 
            260                 265                 270         


Leu Val Ser Arg Gln Val Thr Pro Glu Gln Leu Gln Asn Leu Asp Leu 
        275                 280                 285             


Ser Ser Trp Ser Val Ala Phe Ser Gly Ala Glu Pro Val Arg Ala Ala 
    290                 295                 300                 


Thr Leu Glu Arg Phe Ala His Thr Phe Ala Pro Cys Gly Phe Gln Arg 
305                 310                 315                 320 


Glu Ala Phe Tyr Pro Cys Tyr Gly Met Ala Glu Thr Thr Leu Phe Ile 
                325                 330                 335     


Ser Gly Gly Thr Lys Thr Lys Ala Pro Val Ile Gln Tyr Val Asp Ala 
            340                 345                 350         


Glu Ala Leu Ala Glu Asn Arg Val Val Val Gly Arg Glu Asn Ser Lys 
        355                 360                 365             


Pro Val Val Ser Cys Gly Trp Gly Trp Leu Gly Asp Glu Ile Ala Ile 
    370                 375                 380                 


Val Asp Pro Lys Ser Leu Ala Arg Arg Ser Gln Gly Glu Val Gly Glu 
385                 390                 395                 400 


Ile Trp Val Ser Gly Ala Gly Val Ser Lys Gly Tyr Trp Gln Gln Pro 
                405                 410                 415     


Glu Glu Thr Glu Gln Thr Phe Asn Gly Phe Leu Ala Asp Lys Gly Pro 
            420                 425                 430         


Phe Leu Arg Thr Gly Asp Leu Gly Phe Leu Gln Asp Gly Glu Leu Phe 
        435                 440                 445             


Ile Thr Gly Arg Ile Lys Asp Val Met Ile Leu Trp Gly Arg Tyr Arg 
    450                 455                 460                 


Tyr Pro Gln Asp Ile Glu Leu Thr Val Glu Lys Cys His Pro Ala Leu 
465                 470                 475                 480 


Arg Ser Gly Cys Gly Ala Ala Phe Ser Ile Glu Ala Glu Asp Asp Glu 
                485                 490                 495     


Arg Leu Ile Ile Ile Gln Glu Val Glu Arg Ser Tyr Leu Arg Asn Leu 
            500                 505                 510         


Asn Phe Glu Glu Val Val Gly Ala Ile Arg Gln Ala Val Ala Glu Glu 
        515                 520                 525             


His Thr Val Glu Val Tyr Thr Ile Ser Leu Leu Lys Thr Gly Ser Ile 
    530                 535                 540                 


Ala Lys Thr Thr Ser Gly Lys Ile Gln Arg Arg Leu Cys Arg Ser Gln 
545                 550                 555                 560 


Phe Leu Glu Gly Thr Leu Asn Ser Val Gly Asn Trp Gln Leu Gln Ala 
                565                 570                 575     


Glu Lys Gly Ser Val Ser Glu Leu Ala Asn Asn Ser Asn Tyr Ile Asp 
            580                 585                 590         


Ser Glu Asn Ser 
        595     


<210> 6
<211> 1791
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic polynucleotide

<400> 6
atggcgaaat atagcactat cctggacatt ctgaaccacc gttctcagaa tctgccggac       60

cagattgctt acacctttct gccagacggt gagactgaat ccggccatct gacttatcag      120

cagctgaatg ttcaggtacg tgcgatcgcg gctcacctgc aaagcttcat caccctgcaa      180

gatcgtatcc tggttatcta cccatatacc gctggtctgg agttcatcgc aagcttcttt      240

gcctgcattt gtgcaggcgc tattgcggtc acgtctaacc cgccactgaa caatgaagcg      300

attgcgaagc tgcaggagcg cgttgactct tgccagccga aagctattct gactacggag      360

agcttcctgc aacagatcaa aaagaagctg gctaaaaacc tggatctggc accaaaactg      420

aaccagctgc cttggatcgc taccgacaaa atttccagca gcgaagcgcc gaaatggaaa      480

gagccaaaaa tcgaaccgga taccctggca ttcttccagt acacgtccgg ctctaccggt      540

aagccaaaag gcgttatggt tacgcattct aacattctgc ataacagcga gatcatctac      600

caaagcttcg agcactctgc ggaatcccaa ggtgtaatct ggctgccgat gttccacgac      660

atgggtctga ttggtggtgt tattcagccg ctgtacggtg gtttcccggt taccctgatg      720

tccccggtgg cgctgatcca gaaaccgatc cgttggctga aagccatctg caaatacaaa      780

gccaccactt ccggtggtcc gaacttcgca tacgacctgg tgtcccgcca ggttactccg      840

gaacagctgc agaacctgga cctgtcttct tggagcgtgg cattctctgg cgcggaacct      900

gtccgtgcgg ctaccctgga acgtttcgcg cacacttttg ctccgtgcgg tttccagcgt      960

gaagcattct atccttgcta cggcatggca gaaaccactc tgtttatctc cggtggtact     1020

aagacgaaag caccggtaat ccagtacgtg gacgcggaag cactggctga aaatcgcgtc     1080

gttgttggcc gcgagaatag caaaccggta gtctcctgtg gttggggttg gctgggtgac     1140

gaaatcgcca tcgttgatcc aaaaagcctg gcgcgtcgtt ctcaaggtga agttggcgag     1200

atttgggttt ctggcgctgg tgtatccaaa ggttattggc agcagccaga ggagacggaa     1260

cagaccttta acggtttcct ggccgacaaa ggcccgttcc tgcgcaccgg tgatctgggc     1320

tttctgcagg atggcgagct gttcatcacc ggtcgtatca aagacgtgat gatcctgtgg     1380

ggtcgctacc gttacccgca agacatcgaa ctgaccgtag agaaatgcca cccggcgctg     1440

cgttctggct gcggcgcagc attcagcatc gaggcagagg atgacgagcg cctgatcatt     1500

atccaggagg tggaacgttc ttacctgcgt aatctgaatt tcgaagaagt tgtaggtgct     1560

atccgtcagg ctgttgctga agagcacacc gtcgaggtgt ataccatttc tctgctgaaa     1620

accggctcca ttgcaaagac cacctctggt aagatccagc gtcgtctgtg tcgcagccaa     1680

ttcctggagg gtactctgaa ctccgtgggt aattggcagc tgcaggctga gaagggcagc     1740

gtgagcgagc tggcgaacaa ctccaactac attgatagcg aaaatagctg a              1791


<210> 7
<211> 732
<212> DNA
<213> Synechococcus sp.

<400> 7
atgagttttg agacaaagtt tcccgaacgt gctctgatta caggggccag tcgagggatc       60

ggcagagctg tagccctagc cctagcccga caagggatag cagtagctct ggtggcccgt      120

tcccaacctg atctgctggc ggtgcaagcc caaatccaag cccagggcgg caaggcagcg      180

gtttttccca tggacttggc cgacttagca gctctgcccc agcagttgca ggctctcctg      240

gatcgatttg gcgtctgcga tgtcttggtc aataatgcgg gcatggccca cgttggccct      300

ttggccacct tacctttgtc ggattggcag cgagtgatcg acttgaactt gacggcagct      360

tttctgtgtg cccaagccgt acttcccgga atgcgccggc agcgctgcgg cacgattgtc      420

aacgtcatct cgattgcggg caagcgagct tttcccaact ggggagctta ctgtgccagc      480

aagttcggcc taatgggctt ttctcaagct ttggccgaag aggaacgaca gcatggcatt      540

cgggtcacca gcctgtgccc tggtgccgtg gacacgtccc tctgggatac gggcacggta      600

ggggtcaact tcgaccgttc caaaatgctc tcgccggaat gggtagccga tttgattacc      660

tatattgttc ggttgcccac aggcgcggtg gtggaagatc tcaccttcat gcctgcggtg      720

ggagcctttt ag                                                          732


<210> 8
<211> 243
<212> PRT
<213> Synechococcus sp.

<400> 8
Met Ser Phe Glu Thr Lys Phe Pro Glu Arg Ala Leu Ile Thr Gly Ala 
1               5                   10                  15      


Ser Arg Gly Ile Gly Arg Ala Val Ala Leu Ala Leu Ala Arg Gln Gly 
            20                  25                  30          


Ile Ala Val Ala Leu Val Ala Arg Ser Gln Pro Asp Leu Leu Ala Val 
        35                  40                  45              


Gln Ala Gln Ile Gln Ala Gln Gly Gly Lys Ala Ala Val Phe Pro Met 
    50                  55                  60                  


Asp Leu Ala Asp Leu Ala Ala Leu Pro Gln Gln Leu Gln Ala Leu Leu 
65                  70                  75                  80  


Asp Arg Phe Gly Val Cys Asp Val Leu Val Asn Asn Ala Gly Met Ala 
                85                  90                  95      


His Val Gly Pro Leu Ala Thr Leu Pro Leu Ser Asp Trp Gln Arg Val 
            100                 105                 110         


Ile Asp Leu Asn Leu Thr Ala Ala Phe Leu Cys Ala Gln Ala Val Leu 
        115                 120                 125             


Pro Gly Met Arg Arg Gln Arg Cys Gly Thr Ile Val Asn Val Ile Ser 
    130                 135                 140                 


Ile Ala Gly Lys Arg Ala Phe Pro Asn Trp Gly Ala Tyr Cys Ala Ser 
145                 150                 155                 160 


Lys Phe Gly Leu Met Gly Phe Ser Gln Ala Leu Ala Glu Glu Glu Arg 
                165                 170                 175     


Gln His Gly Ile Arg Val Thr Ser Leu Cys Pro Gly Ala Val Asp Thr 
            180                 185                 190         


Ser Leu Trp Asp Thr Gly Thr Val Gly Val Asn Phe Asp Arg Ser Lys 
        195                 200                 205             


Met Leu Ser Pro Glu Trp Val Ala Asp Leu Ile Thr Tyr Ile Val Arg 
    210                 215                 220                 


Leu Pro Thr Gly Ala Val Val Glu Asp Leu Thr Phe Met Pro Ala Val 
225                 230                 235                 240 


Gly Ala Phe 
            


<210> 9
<211> 732
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic polynucleotide

<400> 9
atgtcctttg aaactaaatt cccggaacgt gcactgatca ctggtgcaag ccgtggcatc       60

ggtcgtgcgg ttgctctggc tctggcgcgt cagggcatcg ctgtggcgct ggttgcccgt      120

agccagcctg atctgctggc agtgcaggcg cagatccagg ctcagggtgg caaagcggcg      180

gtgttcccga tggatctggc tgatctggcg gccctgccgc agcagctgca ggcgctgctg      240

gatcgtttcg gtgtctgcga tgtactggtc aataacgcgg gtatggcgca cgtcggtcca      300

ctggcgaccc tgccgctgtc cgattggcaa cgtgtcatcg atctgaacct gactgctgct      360

ttcctgtgcg cccaggccgt actgccaggt atgcgtcgtc agcgttgcgg cactatcgtt      420

aatgtgatct ctatcgctgg caaacgtgct ttcccgaact ggggcgcata ctgcgcgtct      480

aaatttggcc tgatgggctt cagccaggca ctggcggaag aggagcgtca gcacggcatc      540

cgcgttacca gcctgtgccc gggtgcggtc gatacctccc tgtgggatac cggcaccgtt      600

ggtgtgaact tcgatcgttc taagatgctg tccccggaat gggtggcgga tctgatcacc      660

tacattgttc gcctgccgac tggcgccgta gttgaggatc tgactttcat gccagctgta      720

ggcgcattct ga                                                          732


<210> 10
<211> 1887
<212> DNA
<213> Synechococcus sp.

<400> 10
atgacaactg ctgccgcttc tgctactccc actgcccctg agatgacgct gctgaacgtt       60

tggcaagtgc tggcggaaga gtttgccggt caagttgccc tacgggatcc ccacgcgcag      120

ccagttttcg agatgtctta tggagagctg tttcgccgca ttcaaaccct ggcggctggc      180

ctgcaggctt tgggcatttg cccgggggat cgggtggcca tttttgccga taactccccc      240

cgctggctga tggccgatct ggccacgatg ttcacgggag ctgtgaatgt gccccgcagc      300

gctgtggcgg atcccagtga gctgggctac atcttgcgcc actccggtag cacggccctg      360

attgctcagg atctgaagac cctgaggcgg atccggccgg atgtgcagga gctgggcctg      420

gaacggctgc tgttgctttc cgatgagcag gaagcagggg tgctgaactt ttcccaatgg      480

ctgcaaaagg gtcgggaaca cacctaccaa cccccaaagc tggagcgatc ccaactggcc      540

accatcatct acacctccgg cacctccggt cggcccaagg gggtgatgct cagccacggc      600

aacctgatgc accaggtgga gaacttgggc gtggtcgtac agccacaacc ggggaataag      660

gtgttgacca ttctgcccac ttggcactct tatgagcggg cttgcgagta ttttctcctc      720

agccgtgcct gcatgctggt ctataccagc cctcgcttta tcaaacaaga tttccaacag      780

gagcaccccc attttctggt ggcagtgccg cggatttggg aaaccgttta tgaagggatc      840

caacggcaat tcaaagagaa aagccccctg atgcagcggc tgatccgcgc tctgatggcc      900

gtgagtgaga gccatgtgct ctctggacgg atagctcgca accagtcgat tttgcattac      960

ggagtcagcc cctgggtgcg tctgcaggct cgcctgcaac attggctgct ctggcccctg     1020

caccgattgg ccgatgcgct catctaccgc aaggtgcgac aggcgttggg ccccaatttt     1080

caacatgcca tcagcggcgg tggatccctg cctgcctact tggatctgtt ctacgaggtg     1140

gtgggcattt ccatcttgaa tggctacggc ctcaccgaaa cttcgccggt gttgtgcgcg     1200

cggcgtccag acaacaatgt gcgcggtacg gctggccccc ctctgccggg gacggagttt     1260

cgcattgtgg atcctgaaac tcgacagccg ctgcccccta gagaaaaagg actaatcctg     1320

gcccgtggcc cgcaggtgat gatgggctac tacaacaacc cggaagccac tgccaaggtg     1380

ctcagctccg acggctggtt tgaaaccggg gatctgggct ggctcacccc cgatgggcaa     1440

ctggtgatca ccggcagagc caaggatgtc atcgtcctac tcaacgggga gaatattgag     1500

ccccagccgc tggaagatgc ttgtctgcag tctccttaca tcagccaaat cgtgatcgtc     1560

gggcaagacc aaaagaaatt ggctgccctc atctacccca acctcgatgc cctcaaagcc     1620

tgggctgctg agcaagggat cccggctgag gatgccgagc tgctggccca gccccagacc     1680

cgcaccttga ttttgcagga ggtgcgccgc cgcatccaag aacgccctgg ctaccggccc     1740

gacgagcagg tcagcgactt tcgcttcttg ccggagccct tgagtgtgga aaacggcctc     1800

atgacccaga cgctgaaaat taagcgcaac cctgtggcgg agcgctacgc tcacctcatc     1860

gaggagatgt accgatcttt gaagtag                                         1887


<210> 11
<211> 628
<212> PRT
<213> Synechococcus sp.

<400> 11
Met Thr Thr Ala Ala Ala Ser Ala Thr Pro Thr Ala Pro Glu Met Thr 
1               5                   10                  15      


Leu Leu Asn Val Trp Gln Val Leu Ala Glu Glu Phe Ala Gly Gln Val 
            20                  25                  30          


Ala Leu Arg Asp Pro His Ala Gln Pro Val Phe Glu Met Ser Tyr Gly 
        35                  40                  45              


Glu Leu Phe Arg Arg Ile Gln Thr Leu Ala Ala Gly Leu Gln Ala Leu 
    50                  55                  60                  


Gly Ile Cys Pro Gly Asp Arg Val Ala Ile Phe Ala Asp Asn Ser Pro 
65                  70                  75                  80  


Arg Trp Leu Met Ala Asp Leu Ala Thr Met Phe Thr Gly Ala Val Asn 
                85                  90                  95      


Val Pro Arg Ser Ala Val Ala Asp Pro Ser Glu Leu Gly Tyr Ile Leu 
            100                 105                 110         


Arg His Ser Gly Ser Thr Ala Leu Ile Ala Gln Asp Leu Lys Thr Leu 
        115                 120                 125             


Arg Arg Ile Arg Pro Asp Val Gln Glu Leu Gly Leu Glu Arg Leu Leu 
    130                 135                 140                 


Leu Leu Ser Asp Glu Gln Glu Ala Gly Val Leu Asn Phe Ser Gln Trp 
145                 150                 155                 160 


Leu Gln Lys Gly Arg Glu His Thr Tyr Gln Pro Pro Lys Leu Glu Arg 
                165                 170                 175     


Ser Gln Leu Ala Thr Ile Ile Tyr Thr Ser Gly Thr Ser Gly Arg Pro 
            180                 185                 190         


Lys Gly Val Met Leu Ser His Gly Asn Leu Met His Gln Val Glu Asn 
        195                 200                 205             


Leu Gly Val Val Val Gln Pro Gln Pro Gly Asn Lys Val Leu Thr Ile 
    210                 215                 220                 


Leu Pro Thr Trp His Ser Tyr Glu Arg Ala Cys Glu Tyr Phe Leu Leu 
225                 230                 235                 240 


Ser Arg Ala Cys Met Leu Val Tyr Thr Ser Pro Arg Phe Ile Lys Gln 
                245                 250                 255     


Asp Phe Gln Gln Glu His Pro His Phe Leu Val Ala Val Pro Arg Ile 
            260                 265                 270         


Trp Glu Thr Val Tyr Glu Gly Ile Gln Arg Gln Phe Lys Glu Lys Ser 
        275                 280                 285             


Pro Leu Met Gln Arg Leu Ile Arg Ala Leu Met Ala Val Ser Glu Ser 
    290                 295                 300                 


His Val Leu Ser Gly Arg Ile Ala Arg Asn Gln Ser Ile Leu His Tyr 
305                 310                 315                 320 


Gly Val Ser Pro Trp Val Arg Leu Gln Ala Arg Leu Gln His Trp Leu 
                325                 330                 335     


Leu Trp Pro Leu His Arg Leu Ala Asp Ala Leu Ile Tyr Arg Lys Val 
            340                 345                 350         


Arg Gln Ala Leu Gly Pro Asn Phe Gln His Ala Ile Ser Gly Gly Gly 
        355                 360                 365             


Ser Leu Pro Ala Tyr Leu Asp Leu Phe Tyr Glu Val Val Gly Ile Ser 
    370                 375                 380                 


Ile Leu Asn Gly Tyr Gly Leu Thr Glu Thr Ser Pro Val Leu Cys Ala 
385                 390                 395                 400 


Arg Arg Pro Asp Asn Asn Val Arg Gly Thr Ala Gly Pro Pro Leu Pro 
                405                 410                 415     


Gly Thr Glu Phe Arg Ile Val Asp Pro Glu Thr Arg Gln Pro Leu Pro 
            420                 425                 430         


Pro Arg Glu Lys Gly Leu Ile Leu Ala Arg Gly Pro Gln Val Met Met 
        435                 440                 445             


Gly Tyr Tyr Asn Asn Pro Glu Ala Thr Ala Lys Val Leu Ser Ser Asp 
    450                 455                 460                 


Gly Trp Phe Glu Thr Gly Asp Leu Gly Trp Leu Thr Pro Asp Gly Gln 
465                 470                 475                 480 


Leu Val Ile Thr Gly Arg Ala Lys Asp Val Ile Val Leu Leu Asn Gly 
                485                 490                 495     


Glu Asn Ile Glu Pro Gln Pro Leu Glu Asp Ala Cys Leu Gln Ser Pro 
            500                 505                 510         


Tyr Ile Ser Gln Ile Val Ile Val Gly Gln Asp Gln Lys Lys Leu Ala 
        515                 520                 525             


Ala Leu Ile Tyr Pro Asn Leu Asp Ala Leu Lys Ala Trp Ala Ala Glu 
    530                 535                 540                 


Gln Gly Ile Pro Ala Glu Asp Ala Glu Leu Leu Ala Gln Pro Gln Thr 
545                 550                 555                 560 


Arg Thr Leu Ile Leu Gln Glu Val Arg Arg Arg Ile Gln Glu Arg Pro 
                565                 570                 575     


Gly Tyr Arg Pro Asp Glu Gln Val Ser Asp Phe Arg Phe Leu Pro Glu 
            580                 585                 590         


Pro Leu Ser Val Glu Asn Gly Leu Met Thr Gln Thr Leu Lys Ile Lys 
        595                 600                 605             


Arg Asn Pro Val Ala Glu Arg Tyr Ala His Leu Ile Glu Glu Met Tyr 
    610                 615                 620                 


Arg Ser Leu Lys 
625             


<210> 12
<211> 1791
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic polynucleotide

<400> 12
atggccaagt attctactat tctggatatt ctgaaccacc gctcccagaa cctgccggac       60

caaattgcct acacttttct gcctgacggt gaaaccgaga gcggccacct gacctaccag      120

cagctgaacg tgcaagtgcg tgcaatcgcc gcgcacctgc agagcttcat taccctgcaa      180

gaccgcatcc tggttatcta tccgtacacc gcaggcctgg aatttatcgc ttctttcttc      240

gcctgcatct gcgcaggtgc aattgctgta acttctaacc cgccgctgaa caacgaagcg      300

attgcgaaac tgcaggagcg tgttgatagc tgccagccga aggcgatcct gaccaccgag      360

tccttcctgc agcagatcaa gaagaaactg gcgaaaaacc tggatctggc accgaaactg      420

aaccagctgc cgtggattgc aaccgacaaa atttcctctt ccgaagctcc aaaatggaaa      480

gagccgaaaa tcgaaccgga taccctggct ttcttccagt acacctccgg ttctactggc      540

aagccgaaag gtgtaatggt aactcattcc aacattctgc ataacagcga gatcatttac      600

cagtccttcg aacactctgc ggagagccag ggcgtaattt ggctgccgat gttccatgac      660

atgggtctga tcggcggtgt aattcagcct ctgtacggcg gtttcccagt cactctgatg      720

tccccagtcg ctctgatcca gaaaccgatt cgttggctga aagcaatttg taaatacaaa      780

gccaccacga gcggcggccc gaacttcgcg tacgatctgg tttctcgtca ggttacccct      840

gagcagctgc agaatctgga tctgtcctct tggtctgtcg cattctctgg cgctgaaccg      900

gttcgcgctg cgaccctgga acgttttgcg cacaccttcg ctccgtgcgg tttccagcgc      960

gaagccttct acccttgtta tggtatggca gaaactactc tgttcattag cggtggtact     1020

aaaacgaaag ctccggttat tcaatacgtg gacgcggagg cgctggccga gaaccgcgtg     1080

gttgttggtc gtgaaaatag caaaccggta gtgtcctgtg gttggggttg gctgggtgat     1140

gagatcgcaa tcgtggaccc gaaaagcctg gcacgccgtt ctcagggcga ggttggtgag     1200

atttgggttt ctggtgctgg cgtttccaaa ggttattggc aacaacctga agagactgaa     1260

cagaccttta acggctttct ggcggacaag ggtccgtttc tgcgtaccgg tgatctgggc     1320

tttctgcagg atggcgaact gttcatcacc ggtcgtatca aagacgtaat gattctgtgg     1380

ggtcgttacc gctatccgca ggacatcgag ctgaccgtcg agaaatgtca tccggccctg     1440

cgctctggtt gcggtgcagc tttcagcatc gaggcagagg atgatgagcg tctgattatc     1500

atccaagaag ttgaacgttc ttacctgcgt aacctgaatt tcgaagaagt cgtaggtgca     1560

atccgccagg ctgttgctga agagcacact gtagaagttt ataccatctc cctgctgaaa     1620

accggttcta ttgcgaagac cacctctggc aaaattcagc gccgtctgtg ccgcagccag     1680

ttcctggagg gtactctgaa ctccgtaggc aactggcagc tgcaagcgga gaagggctct     1740

gtgtctgagc tggctaacaa cagcaattac atcgactccg aaaattcttg a              1791


<210> 13
<211> 1686
<212> DNA
<213> Escherichia coli

<400> 13
atgaagaagg tttggcttaa ccgttatccc gcggacgttc cgacggagat caaccctgac       60

cgttatcaat ctctggtaga tatgtttgag cagtcggtcg cgcgctacgc cgatcaacct      120

gcgtttgtga atatggggga ggtaatgacc ttccgcaagc tggaagaacg cagtcgcgcg      180

tttgccgctt atttgcaaca agggttgggg ctgaagaaag gcgatcgcgt tgcgttgatg      240

atgcctaatt tattgcaata tccggtggcg ctgtttggca ttttgcgtgc cgggatgatc      300

gtcgtaaacg ttaacccgtt gtataccccg cgtgagcttg agcatcagct taacgatagc      360

ggcgcatcgg cgattgttat cgtgtctaac tttgctcaca cactggaaaa agtggttgat      420

aaaaccgccg ttcagcacgt aattctgacc cgtatgggcg atcagctatc tacggcaaaa      480

ggcacggtag tcaatttcgt tgttaaatac atcaagcgtt tggtgccgaa ataccatctg      540

ccagatgcca tttcatttcg tagcgcactg cataacggct accggatgca gtacgtcaaa      600

cccgaactgg tgccggaaga tttagctttt ctgcaataca ccggcggcac cactggtgtg      660

gcgaaaggcg cgatgctgac tcaccgcaat atgctggcga acctggaaca ggttaacgcg      720

acctatggtc cgctgttgca tccgggcaaa gagctggtgg tgacggcgct gccgctgtat      780

cacatttttg ccctgaccat taactgcctg ctgtttatcg aactgggtgg gcagaacctg      840

cttatcacta acccgcgcga tattccaggg ttggtaaaag agttagcgaa atatccgttt      900

accgctatca cgggcgttaa caccttgttc aatgcgttgc tgaacaataa agagttccag      960

cagctggatt tctccagtct gcatctttcc gcaggcggtg ggatgccagt gcagcaagtg     1020

gtggcagagc gttgggtgaa actgaccgga cagtatctgc tggaaggcta tggccttacc     1080

gagtgtgcgc cgctggtcag cgttaaccca tatgatattg attatcatag tggtagcatc     1140

ggtttgccgg tgccgtcgac ggaagccaaa ctggtggatg atgatgataa tgaagtacca     1200

ccaggtcaac cgggtgagct ttgtgtcaaa ggaccgcagg tgatgctggg ttactggcag     1260

cgtcccgatg ctaccgatga aatcatcaaa aatggctggt tacacaccgg cgacatcgcg     1320

gtaatggatg aagaaggatt cctgcgcatt gtcgatcgta aaaaagacat gattctggtt     1380

tccggtttta acgtctatcc caacgagatt gaagatgtcg tcatgcagca tcctggcgta     1440

caggaagtcg cggctgttgg cgtaccttcc ggctccagtg gtgaagcggt gaaaatcttc     1500

gtagtgaaaa aagatccatc gcttaccgaa gagtcactgg tgactttttg ccgccgtcag     1560

ctcacgggat acaaagtacc gaagctggtg gagtttcgtg atgagttacc gaaatctaac     1620

gtcggaaaaa ttttgcgacg agaattacgt gacgaagcgc gcggcaaagt ggacaataaa     1680

gcctga                                                                1686


<210> 14
<211> 561
<212> PRT
<213> Escherichia coli

<400> 14
Met Lys Lys Val Trp Leu Asn Arg Tyr Pro Ala Asp Val Pro Thr Glu 
1               5                   10                  15      


Ile Asn Pro Asp Arg Tyr Gln Ser Leu Val Asp Met Phe Glu Gln Ser 
            20                  25                  30          


Val Ala Arg Tyr Ala Asp Gln Pro Ala Phe Val Asn Met Gly Glu Val 
        35                  40                  45              


Met Thr Phe Arg Lys Leu Glu Glu Arg Ser Arg Ala Phe Ala Ala Tyr 
    50                  55                  60                  


Leu Gln Gln Gly Leu Gly Leu Lys Lys Gly Asp Arg Val Ala Leu Met 
65                  70                  75                  80  


Met Pro Asn Leu Leu Gln Tyr Pro Val Ala Leu Phe Gly Ile Leu Arg 
                85                  90                  95      


Ala Gly Met Ile Val Val Asn Val Asn Pro Leu Tyr Thr Pro Arg Glu 
            100                 105                 110         


Leu Glu His Gln Leu Asn Asp Ser Gly Ala Ser Ala Ile Val Ile Val 
        115                 120                 125             


Ser Asn Phe Ala His Thr Leu Glu Lys Val Val Asp Lys Thr Ala Val 
    130                 135                 140                 


Gln His Val Ile Leu Thr Arg Met Gly Asp Gln Leu Ser Thr Ala Lys 
145                 150                 155                 160 


Gly Thr Val Val Asn Phe Val Val Lys Tyr Ile Lys Arg Leu Val Pro 
                165                 170                 175     


Lys Tyr His Leu Pro Asp Ala Ile Ser Phe Arg Ser Ala Leu His Asn 
            180                 185                 190         


Gly Tyr Arg Met Gln Tyr Val Lys Pro Glu Leu Val Pro Glu Asp Leu 
        195                 200                 205             


Ala Phe Leu Gln Tyr Thr Gly Gly Thr Thr Gly Val Ala Lys Gly Ala 
    210                 215                 220                 


Met Leu Thr His Arg Asn Met Leu Ala Asn Leu Glu Gln Val Asn Ala 
225                 230                 235                 240 


Thr Tyr Gly Pro Leu Leu His Pro Gly Lys Glu Leu Val Val Thr Ala 
                245                 250                 255     


Leu Pro Leu Tyr His Ile Phe Ala Leu Thr Ile Asn Cys Leu Leu Phe 
            260                 265                 270         


Ile Glu Leu Gly Gly Gln Asn Leu Leu Ile Thr Asn Pro Arg Asp Ile 
        275                 280                 285             


Pro Gly Leu Val Lys Glu Leu Ala Lys Tyr Pro Phe Thr Ala Ile Thr 
    290                 295                 300                 


Gly Val Asn Thr Leu Phe Asn Ala Leu Leu Asn Asn Lys Glu Phe Gln 
305                 310                 315                 320 


Gln Leu Asp Phe Ser Ser Leu His Leu Ser Ala Gly Gly Gly Met Pro 
                325                 330                 335     


Val Gln Gln Val Val Ala Glu Arg Trp Val Lys Leu Thr Gly Gln Tyr 
            340                 345                 350         


Leu Leu Glu Gly Tyr Gly Leu Thr Glu Cys Ala Pro Leu Val Ser Val 
        355                 360                 365             


Asn Pro Tyr Asp Ile Asp Tyr His Ser Gly Ser Ile Gly Leu Pro Val 
    370                 375                 380                 


Pro Ser Thr Glu Ala Lys Leu Val Asp Asp Asp Asp Asn Glu Val Pro 
385                 390                 395                 400 


Pro Gly Gln Pro Gly Glu Leu Cys Val Lys Gly Pro Gln Val Met Leu 
                405                 410                 415     


Gly Tyr Trp Gln Arg Pro Asp Ala Thr Asp Glu Ile Ile Lys Asn Gly 
            420                 425                 430         


Trp Leu His Thr Gly Asp Ile Ala Val Met Asp Glu Glu Gly Phe Leu 
        435                 440                 445             


Arg Ile Val Asp Arg Lys Lys Asp Met Ile Leu Val Ser Gly Phe Asn 
    450                 455                 460                 


Val Tyr Pro Asn Glu Ile Glu Asp Val Val Met Gln His Pro Gly Val 
465                 470                 475                 480 


Gln Glu Val Ala Ala Val Gly Val Pro Ser Gly Ser Ser Gly Glu Ala 
                485                 490                 495     


Val Lys Ile Phe Val Val Lys Lys Asp Pro Ser Leu Thr Glu Glu Ser 
            500                 505                 510         


Leu Val Thr Phe Cys Arg Arg Gln Leu Thr Gly Tyr Lys Val Pro Lys 
        515                 520                 525             


Leu Val Glu Phe Arg Asp Glu Leu Pro Lys Ser Asn Val Gly Lys Ile 
    530                 535                 540                 


Leu Arg Arg Glu Leu Arg Asp Glu Ala Arg Gly Lys Val Asp Asn Lys 
545                 550                 555                 560 


Ala 
    


<210> 15
<211> 1686
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic polynucleotide

<400> 15
atgaagaaag tttggctgaa ccgttatccg gcagatgtac cgactgaaat taacccagat       60

cgttaccagt ccctggttga catgttcgaa cagtccgtgg ctcgctacgc cgatcagcct      120

gctttcgtca acatgggtga ggtaatgacc tttcgcaaac tggaggagcg ttcccgtgct      180

ttcgcggcat acctgcagca gggtctgggc ctgaagaaag gcgaccgcgt ggccctgatg      240

atgccgaacc tgctgcaata tcctgtggcg ctgttcggta tcctgcgtgc tggtatgatc      300

gttgtcaatg ttaaccctct gtatacccct cgtgaactgg agcaccagct gaatgactct      360

ggtgcgtctg ctatcgttat cgtttccaat ttcgcacata cgctggagaa agtggttgat      420

aaaaccgcag tgcagcatgt cattctgact cgcatgggtg accagctgtc caccgctaaa      480

ggtactgtag tcaacttcgt tgtgaaatac attaagcgcc tggttccgaa ataccacctg      540

ccagatgcaa ttagctttcg ctctgcactg cataacggtt accgtatgca gtacgtaaaa      600

ccagagctgg tgccggaaga cctggccttt ctgcagtata ccggcggcac caccggcgtg      660

gcaaagggcg cgatgctgac ccatcgtaac atgctggcga acctggagca ggttaacgca      720

acgtacggcc cgctgctgca cccgggtaaa gaactggtag ttacggcact gcctctgtat      780

cacatctttg cactgacgat caactgtctg ctgttcattg aactgggtgg tcagaacctg      840

ctgatcacca acccgcgtga cattccgggc ctggtaaaag agctggctaa gtacccgttc      900

accgccatta ctggcgtaaa cactctgttt aacgcgctgc tgaacaacaa agagtttcag      960

cagctggact tctctagcct gcacctgagc gctggcggtg gcatgccggt tcagcaggtt     1020

gtggcagagc gttgggtgaa actgaccggc cagtatctgc tggagggtta tggtctgacc     1080

gagtgtgcac cgctggtcag cgttaacccg tatgatattg attaccactc tggttctatt     1140

ggtctgccgg ttccgtccac ggaagccaaa ctggtggacg atgacgacaa cgaagtacct     1200

ccgggccagc cgggtgagct gtgtgtcaag ggtccgcagg ttatgctggg ctactggcag     1260

cgcccggacg ccaccgacga aatcattaaa aacggttggc tgcataccgg tgatatcgct     1320

gtaatggacg aagaaggttt cctgcgtatc gtggaccgta agaaagatat gattctggtg     1380

agcggtttca acgtgtaccc gaacgaaatt gaggacgtag ttatgcaaca ccctggcgtg     1440

caggaggtgg cagccgtggg cgtgccgtcc ggttcttctg gtgaggctgt gaaaatcttt     1500

gtcgttaaaa aggacccgtc cctgaccgaa gaatctctgg tgacgttttg ccgccgtcaa     1560

ctgactggct acaaagtgcc gaaactggtc gagttccgcg atgagctgcc aaaatctaac     1620

gtgggtaaga tcctgcgccg cgagctgcgt gacgaggcac gtggcaaagt tgacaataaa     1680

gcataa                                                                1686


<210> 16
<211> 1017
<212> DNA
<213> Stenotrophomonas maltophilia

<400> 16
atgctcttca agaatgtctc gatcgccggc ctggcacacg ttgatgcgcc gcatacgctg       60

acgaccaagg aaatcaacga gcggctgcag ccgacgctcg atcgccttgg tatccgcacc      120

gacgtgctcg gcgatatcgc cggcatccat gcccgccgcc tgtgggacaa cggcgtgctg      180

gcctccgacg ccgccaccat ggccggccgc aaggcgctgg aagacgcagg catcaatgcg      240

acgcaggtcg gcctgctggt caacacctcg gtcagccgcg actacctgga gccgtccacc      300

gcgtcgatcg tctccggcaa cctcggcgtc agcgacgagt gcatgacctt cgacgtcgcc      360

aatgcctgcc tggccttcat caacggcatg gatatcgcgg cgcgcatgat cgagcgcggc      420

gatatcgact acgcgctggt ggtggacggc gagaccgcca acctggtgta cgagaagacc      480

ctggagcgga tgaccgcgcc ggacgtcacc gccgacgact tccgcaacga actggcggcg      540

ctgaccaccg gttcgggtgc cgctgccatg gtcatggcgc gctcggagct ggtgccggac      600

gccccgcgct acaagggcgg cgtgacccgc tcggccaccg agtggaacca gctgtgcctg      660

ggcaacctgg accgcatggt caccgacacc cgcctgctgc tgatcgaagg catcaagctg      720

gcgcagaaga ccttcactgc cgccaagatc gcactcggct gggccgtgga agagctggac      780

cagttcgtga tccaccaggt cagccagccg cacaccgctg cgttcatcaa gaacttcggc      840

atcgacccga agaaggtcat gaccatcttc ggcgagcacg gcaacatcgg cccggcctcg      900

gtgccgatcg tgctgagcaa gctcaagcag ctgggcaagc tgaagaaggg cgatcgcatc      960

gcgcttctgg gcatcggctc gggcctgaac tgctcgatgg ctgaagtggt ctggtaa        1017


<210> 17
<211> 338
<212> PRT
<213> Stenotrophomonas maltophilia

<400> 17
Met Leu Phe Lys Asn Val Ser Ile Ala Gly Leu Ala His Val Asp Ala 
1               5                   10                  15      


Pro His Thr Leu Thr Thr Lys Glu Ile Asn Glu Arg Leu Gln Pro Thr 
            20                  25                  30          


Leu Asp Arg Leu Gly Ile Arg Thr Asp Val Leu Gly Asp Ile Ala Gly 
        35                  40                  45              


Ile His Ala Arg Arg Leu Trp Asp Asn Gly Val Leu Ala Ser Asp Ala 
    50                  55                  60                  


Ala Thr Met Ala Gly Arg Lys Ala Leu Glu Asp Ala Gly Ile Asn Ala 
65                  70                  75                  80  


Thr Gln Val Gly Leu Leu Val Asn Thr Ser Val Ser Arg Asp Tyr Leu 
                85                  90                  95      


Glu Pro Ser Thr Ala Ser Ile Val Ser Gly Asn Leu Gly Val Ser Asp 
            100                 105                 110         


Glu Cys Met Thr Phe Asp Val Ala Asn Ala Cys Leu Ala Phe Ile Asn 
        115                 120                 125             


Gly Met Asp Ile Ala Ala Arg Met Ile Glu Arg Gly Asp Ile Asp Tyr 
    130                 135                 140                 


Ala Leu Val Val Asp Gly Glu Thr Ala Asn Leu Val Tyr Glu Lys Thr 
145                 150                 155                 160 


Leu Glu Arg Met Thr Ala Pro Asp Val Thr Ala Asp Asp Phe Arg Asn 
                165                 170                 175     


Glu Leu Ala Ala Leu Thr Thr Gly Ser Gly Ala Ala Ala Met Val Met 
            180                 185                 190         


Ala Arg Ser Glu Leu Val Pro Asp Ala Pro Arg Tyr Lys Gly Gly Val 
        195                 200                 205             


Thr Arg Ser Ala Thr Glu Trp Asn Gln Leu Cys Leu Gly Asn Leu Asp 
    210                 215                 220                 


Arg Met Val Thr Asp Thr Arg Leu Leu Leu Ile Glu Gly Ile Lys Leu 
225                 230                 235                 240 


Ala Gln Lys Thr Phe Thr Ala Ala Lys Ile Ala Leu Gly Trp Ala Val 
                245                 250                 255     


Glu Glu Leu Asp Gln Phe Val Ile His Gln Val Ser Gln Pro His Thr 
            260                 265                 270         


Ala Ala Phe Ile Lys Asn Phe Gly Ile Asp Pro Lys Lys Val Met Thr 
        275                 280                 285             


Ile Phe Gly Glu His Gly Asn Ile Gly Pro Ala Ser Val Pro Ile Val 
    290                 295                 300                 


Leu Ser Lys Leu Lys Gln Leu Gly Lys Leu Lys Lys Gly Asp Arg Ile 
305                 310                 315                 320 


Ala Leu Leu Gly Ile Gly Ser Gly Leu Asn Cys Ser Met Ala Glu Val 
                325                 330                 335     


Val Trp 
        


<210> 18
<211> 1017
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic polynucleotide

<400> 18
atgctgttca aaaacgtgtc tattgcgggt ctggctcatg ttgatgcccc gcacaccctg       60

accaccaaag aaatcaatga acgtctgcaa ccgaccctgg atcgtctggg tattcgtacg      120

gacgtgctgg gcgatattgc gggtattcat gctcgccgcc tgtgggacaa tggcgttctg      180

gcgagcgacg ccgcgaccat ggcgggtcgc aaagcgctgg aggacgcggg cattaacgcc      240

acccaagtcg gtctgctggt caacactagc gtgagccgtg attacttgga gccgtctacg      300

gcgagcattg ttagcggcaa tttgggcgtt tccgatgagt gcatgacctt cgatgtggca      360

aacgcatgtc tggcgtttat caatggcatg gacatcgcag cgcgtatgat cgagcgtggt      420

gatatcgact acgcgctggt cgtcgatggt gaaaccgcga acctggtcta tgaaaagacc      480

ctggagcgca tgaccgctcc ggacgttacc gcggatgatt ttcgtaatga actggcggct      540

ctgaccacgg gtagcggtgc agcggcgatg gtgatggcgc gtagcgagtt ggtgccggac      600

gcaccgcgtt acaaaggtgg tgtgacccgt agcgcgacgg aatggaatca actgtgcctg      660

ggtaatctgg atcgtatggt gacggacacc cgcctgctgc tgatcgaagg catcaaactg      720

gcacagaaaa cgtttacggc ggctaagatc gcgctgggtt gggcggtcga agagctggat      780

cagttcgtca tccaccaggt cagccagccg cataccgcag ccttcattaa gaactttggc      840

attgacccga agaaagttat gacgattttc ggtgaacacg gtaacatcgg tccggcgagc      900

gttccaatcg ttttgtctaa gttgaaacaa ttgggtaagc tgaagaaggg cgaccgcatc      960

gcactgctgg gtattggctc gggcctgaat tgcagcatgg ccgaggtggt ttggtga        1017


<210> 19
<211> 1659
<212> DNA
<213> Stenotrophomonas maltophilia

<400> 19
atgaaccgac cctgcaatat tgcggcccgt ttgcctgaac tggcgcgtga acggcccgac       60

cagatcgcca tccgctgccc gggccgccgt ggtgccggca acggcatggc cgcctacgac      120

gtgaccctgg attaccgcca gctggacgcc cgcagcgacg ccatggcggc tggcctggcc      180

ggctacggga tcggccgcgg ggtgcgcacg gtggtgatgg tgcggccgtc gccggagttc      240

ttcctgttga tgtttgccct gttcaaactg ggcgcggtgc cggtgctggt cgacccgggc      300

atcgacaagc gcgcgctgaa gcagtgcctg gacgaggcgc agccggaagc cttcatcggc      360

attccgctgg cccatgtggc gcggctggtg ctgcgctggg caccgtcggc aacccgtctg      420

gtcaccgtcg gtcggcgcct gggctggggc ggaaccactc tggccgcgct ggaacgcgct      480

ggcgccaacg gggggccgat gctggccgct accgatggcg aggacatggc cgcgatcctg      540

ttcaccagcg gctcgaccgg cgtgcccaag ggcgtggttt accgccaccg ccactttgtc      600

ggccagatcc agctgctggg cagcgccttc ggcatggaag cgggcggcgt ggacctgccg      660

accttcccgc cgtttgcctt gttcgacccg gcgctgggcc tgacctcggt gattccggac      720

atggacccga cccggccggc gcaggccgac cctgcgcggc tgcatgacgc gatccagcgc      780

ttcggggtga cccagctgtt cggctcgccg gcgctgatgc gggtgttggc ccgccacggc      840

cggcccctgc caacggtgac ccgggtgacc tcggccggtg cgccggtgcc gccggatgtg      900

gtcgctacca tccgcagtct gctgcccgcc gatgcgcagt tctggacccc gtatggcgcc      960

accgaatgct tgccggtggc ggtggtggag ggccgcgagc tggagcgcac ccgtgctgct     1020

accgaggccg gcgccggtac ctgcgtgggc agcgtggtcg agccgaacga ggtgcgcatc     1080

atcgccatcg atgacgcacc gctgccggac tggtcgcagg cgcgtgtgct gttcaccggc     1140

gaggtgggcg agatcaccgt ggccggaccg accgccaccg acagctactt caaccgcccg     1200

caggccaccg cggcggcgaa gatcagcgag accttggctg atggcagcgt gcgcgtcgtg     1260

catcgcatgg gcgacgtcgg ctacttcgat gcgcagggtc gtctgtggtt ctgcgggcgc     1320

aagacccatc gggtggaaac cgcgcatggg ccgctgtaca ccgagcaggt cgagccggtg     1380

ttcaataccg tgcccggggt tgcgcgcacg gcgctggtcg gtgttggtcc ggccggtgcg     1440

caggtgccgg tgctgtgcgt ggagctgcaa cgtggtcagt cagacagccc ggcgctgcag     1500

gaagcgctgc gtgcgcacgc agcagcccgc gcgccagaag ccggcctgca gcacttcctg     1560

gtgcatccgg cgttccccgt tgatatccgt cacaacgcca agatcggccg cgagaagctc     1620

gccgtctggg ccagcaccga actggagaag cgcgcatga                            1659


<210> 20
<211> 552
<212> PRT
<213> Stenotrophomonas maltophilia

<400> 20
Met Asn Arg Pro Cys Asn Ile Ala Ala Arg Leu Pro Glu Leu Ala Arg 
1               5                   10                  15      


Glu Arg Pro Asp Gln Ile Ala Ile Arg Cys Pro Gly Arg Arg Gly Ala 
            20                  25                  30          


Gly Asn Gly Met Ala Ala Tyr Asp Val Thr Leu Asp Tyr Arg Gln Leu 
        35                  40                  45              


Asp Ala Arg Ser Asp Ala Met Ala Ala Gly Leu Ala Gly Tyr Gly Ile 
    50                  55                  60                  


Gly Arg Gly Val Arg Thr Val Val Met Val Arg Pro Ser Pro Glu Phe 
65                  70                  75                  80  


Phe Leu Leu Met Phe Ala Leu Phe Lys Leu Gly Ala Val Pro Val Leu 
                85                  90                  95      


Val Asp Pro Gly Ile Asp Lys Arg Ala Leu Lys Gln Cys Leu Asp Glu 
            100                 105                 110         


Ala Gln Pro Glu Ala Phe Ile Gly Ile Pro Leu Ala His Val Ala Arg 
        115                 120                 125             


Leu Val Leu Arg Trp Ala Pro Ser Ala Thr Arg Leu Val Thr Val Gly 
    130                 135                 140                 


Arg Arg Leu Gly Trp Gly Gly Thr Thr Leu Ala Ala Leu Glu Arg Ala 
145                 150                 155                 160 


Gly Ala Asn Gly Gly Pro Met Leu Ala Ala Thr Asp Gly Glu Asp Met 
                165                 170                 175     


Ala Ala Ile Leu Phe Thr Ser Gly Ser Thr Gly Val Pro Lys Gly Val 
            180                 185                 190         


Val Tyr Arg His Arg His Phe Val Gly Gln Ile Gln Leu Leu Gly Ser 
        195                 200                 205             


Ala Phe Gly Met Glu Ala Gly Gly Val Asp Leu Pro Thr Phe Pro Pro 
    210                 215                 220                 


Phe Ala Leu Phe Asp Pro Ala Leu Gly Leu Thr Ser Val Ile Pro Asp 
225                 230                 235                 240 


Met Asp Pro Thr Arg Pro Ala Gln Ala Asp Pro Ala Arg Leu His Asp 
                245                 250                 255     


Ala Ile Gln Arg Phe Gly Val Thr Gln Leu Phe Gly Ser Pro Ala Leu 
            260                 265                 270         


Met Arg Val Leu Ala Arg His Gly Arg Pro Leu Pro Thr Val Thr Arg 
        275                 280                 285             


Val Thr Ser Ala Gly Ala Pro Val Pro Pro Asp Val Val Ala Thr Ile 
    290                 295                 300                 


Arg Ser Leu Leu Pro Ala Asp Ala Gln Phe Trp Thr Pro Tyr Gly Ala 
305                 310                 315                 320 


Thr Glu Cys Leu Pro Val Ala Val Val Glu Gly Arg Glu Leu Glu Arg 
                325                 330                 335     


Thr Arg Ala Ala Thr Glu Ala Gly Ala Gly Thr Cys Val Gly Ser Val 
            340                 345                 350         


Val Glu Pro Asn Glu Val Arg Ile Ile Ala Ile Asp Asp Ala Pro Leu 
        355                 360                 365             


Pro Asp Trp Ser Gln Ala Arg Val Leu Phe Thr Gly Glu Val Gly Glu 
    370                 375                 380                 


Ile Thr Val Ala Gly Pro Thr Ala Thr Asp Ser Tyr Phe Asn Arg Pro 
385                 390                 395                 400 


Gln Ala Thr Ala Ala Ala Lys Ile Ser Glu Thr Leu Ala Asp Gly Ser 
                405                 410                 415     


Val Arg Val Val His Arg Met Gly Asp Val Gly Tyr Phe Asp Ala Gln 
            420                 425                 430         


Gly Arg Leu Trp Phe Cys Gly Arg Lys Thr His Arg Val Glu Thr Ala 
        435                 440                 445             


His Gly Pro Leu Tyr Thr Glu Gln Val Glu Pro Val Phe Asn Thr Val 
    450                 455                 460                 


Pro Gly Val Ala Arg Thr Ala Leu Val Gly Val Gly Pro Ala Gly Ala 
465                 470                 475                 480 


Gln Val Pro Val Leu Cys Val Glu Leu Gln Arg Gly Gln Ser Asp Ser 
                485                 490                 495     


Pro Ala Leu Gln Glu Ala Leu Arg Ala His Ala Ala Ala Arg Ala Pro 
            500                 505                 510         


Glu Ala Gly Leu Gln His Phe Leu Val His Pro Ala Phe Pro Val Asp 
        515                 520                 525             


Ile Arg His Asn Ala Lys Ile Gly Arg Glu Lys Leu Ala Val Trp Ala 
    530                 535                 540                 


Ser Thr Glu Leu Glu Lys Arg Ala 
545                 550         


<210> 21
<211> 1659
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic polynucleotide

<400> 21
atgaaccgtc cgtgcaacat tgctgcgcgc ctgccagaac tggcgcgtga gcgtccggac       60

caaatcgcaa ttcgttgccc gggtcgccgt ggtgcaggca acggtatggc agcatacgac      120

gtcacgctgg actaccgtca actggatgcc cgcagcgacg cgatggcggc aggtctggca      180

ggttatggca tcggccgtgg tgtgcgtacg gtcgtgatgg ttcgtccgtc cccggagttc      240

ttcctgctga tgttcgctct gtttaagctg ggtgcggtgc cggttctggt cgacccgggt      300

attgataagc gcgcactgaa gcagtgcctg gacgaggccc agccagaggc gtttatcggt      360

attccgctgg cgcacgtcgc ccgcttggtt ctgcgctggg ctccgagcgc gacgcgcctg      420

gtgaccgtcg gccgtcgcct gggctggggt ggcacgacgc tggcggcact ggaacgtgcg      480

ggtgccaatg gtggcccgat gctggccgcg accgacggtg aagatatggc ggctattctg      540

tttaccagcg gtagcaccgg tgtgccgaag ggtgtggttt accgtcaccg ccatttcgtt      600

ggccagatcc agctgctggg cagcgcgttc ggcatggagg caggtggtgt cgatctgccg      660

acctttccgc ctttcgcatt gttcgatccg gcactgggcc tgaccagcgt gatcccggat      720

atggacccga cccgtccggc gcaagcggac ccggcacgtc tgcacgacgc catccagcgt      780

tttggcgtga cgcagctgtt tggctctccg gcgttgatgc gtgtcctggc acgccacggt      840

cgtccgttgc cgacggttac tcgcgtgacc agcgccggtg cgccggtccc tccggacgtt      900

gtggcgacca ttcgttccct gctgccggct gacgcgcagt tctggacccc gtatggcgcg      960

accgagtgct tgccggttgc ggtggttgaa ggccgtgagc tggaacgtac ccgtgccgcg     1020

actgaggccg gtgcgggcac gtgtgtcggc agcgtggttg aaccgaatga agttcgcatc     1080

attgctatcg acgatgcgcc gctgcctgat tggagccaag cgcgcgtcct gtttacgggt     1140

gaggtgggcg agatcacggt tgctggcccg accgccacgg atagctactt caaccgtcct     1200

caagccaccg cggcagccaa gattagcgag actctggcgg atggttccgt tcgcgtggtt     1260

catcgtatgg gtgacgtggg ttactttgac gcacagggcc gtctgtggtt ctgtggtcgc     1320

aagacccacc gtgtggagac tgcgcatggt ccgctgtata cggaacaagt ggaaccggtt     1380

ttcaacaccg tgccgggtgt ggcccgtacc gctctggtgg gcgtgggtcc ggcaggcgcg     1440

caagttccgg ttctgtgtgt cgaactgcaa cgcggccagt ccgattcgcc tgcgctgcaa     1500

gaggcgctgc gtgcgcatgc agcggctcgc gctcctgagg cgggtctgca gcattttctg     1560

gtccacccgg cttttccggt tgatatccgt cataatgcga agattggccg cgaaaaactg     1620

gcggtctggg cctccaccga attggagaag cgtgcctaa                            1659


<210> 22
<211> 993
<212> DNA
<213> Stenotrophomonas maltophilia

<400> 22
atgaagatcc tggtcaccgg tggtggtggt ttccttggcc aggcgctgtg ccgcggtctg       60

gtcgaacgtg gccaccaggt gctggcgttc aaccgcagcc actacccgga actgcaggcc      120

atgggcgtgg gccagatccg cggcgatctg gccgatgcgc aggcggtgct gcacgcggtg      180

gccggcgtcg atgcggtatt ccacaacggt gcgaaggccg gcgcctgggg cagctatgac      240

agctaccacc aggccaacgt ggtcggcacc gacaacgtca tcgcggcctg tcgtgcacat      300

gacatcagcc gcttggtcta cacctccacg cccagcgtga cccaccgcgc cacccatccg      360

gtggaaggcc ttggtgccga cgacgtgcca tacggcgagg acttccaggc gccgtatgcg      420

gcgaccaagg cgatcgccga acagcgcgtg ctggccgcca acgatgcaac gctggccacg      480

gtggcgctgc gcccgcgcct gatctggggc ccgggcgacc agcagctggt gccccgcctg      540

gccgaacgcg cacggcaggg gcgcctgcgc ctggtcggcg atggcaacaa caaggtcgat      600

accacctaca tcgacaacgc cgcgctcgcg catttcctcg ccttggatgc actggcaccg      660

ggtgcggcct gtgcgggcag ggcgtacttc atttccaacg gcgagccgct gccgatgcgc      720

gagctggtca acaagctgct ggccgctgtg ggtgcgccga cggtggacaa ggcgatcagc      780

ttcaagaccg cttatcgcat tggtgcggtc tgcgaacggc tgtggccgct gctgcgcctg      840

cgcggcgagc cgccgttgac ccgcttcctg gccgagcagc tgtgcacgcc gcactggtac      900

agcatggagc cggcacgccg ggacttcggt tacgtgccgc aggtcagcat tgaagaaggg      960

ctgcgcaggc tgaaggcttc atctgccgca tag                                   993


<210> 23
<211> 329
<212> PRT
<213> Stenotrophomonas maltophilia

<400> 23
Met Lys Ile Leu Val Thr Gly Gly Gly Gly Phe Leu Gly Gln Ala Leu 
1               5                   10                  15      


Cys Arg Gly Leu Val Glu Arg Gly His Gln Val Leu Ala Phe Asn Arg 
            20                  25                  30          


Ser His Tyr Pro Glu Leu Gln Ala Met Gly Val Gly Gln Ile Arg Gly 
        35                  40                  45              


Asp Leu Ala Asp Ala Gln Ala Val Leu His Ala Val Ala Gly Val Asp 
    50                  55                  60                  


Ala Val Phe His Asn Gly Ala Lys Ala Gly Ala Trp Gly Ser Tyr Asp 
65                  70                  75                  80  


Ser Tyr His Gln Ala Asn Val Val Gly Thr Asp Asn Val Ile Ala Ala 
                85                  90                  95      


Cys Arg Ala His Asp Ile Ser Arg Leu Val Tyr Thr Ser Thr Pro Ser 
            100                 105                 110         


Val Thr His Arg Thr His Pro Val Glu Gly Leu Gly Ala Asp Asp Val 
        115                 120                 125             


Pro Tyr Gly Glu Asp Phe Gln Ala Pro Tyr Ala Ala Thr Lys Ala Ile 
    130                 135                 140                 


Ala Glu Gln Arg Val Leu Ala Ala Asn Asp Ala Thr Leu Ala Thr Val 
145                 150                 155                 160 


Ala Leu Arg Pro Arg Leu Ile Trp Gly Pro Gly Asp Gln Gln Leu Val 
                165                 170                 175     


Pro Arg Leu Ala Glu Arg Ala Arg Gln Gly Arg Leu Arg Leu Val Gly 
            180                 185                 190         


Asp Gly Asn Asn Lys Val Asp Thr Thr Tyr Ile Asp Asn Ala Ala Leu 
        195                 200                 205             


Ala His Phe Leu Ala Leu Asp Ala Leu Ala Pro Gly Ala Ala Cys Ala 
    210                 215                 220                 


Gly Arg Ala Tyr Phe Ile Ser Asn Gly Glu Pro Leu Pro Met Arg Glu 
225                 230                 235                 240 


Leu Val Asn Lys Leu Leu Ala Ala Val Gly Ala Pro Thr Val Asp Lys 
                245                 250                 255     


Ala Ile Ser Phe Lys Thr Ala Tyr Arg Ile Gly Ala Val Cys Glu Arg 
            260                 265                 270         


Leu Trp Pro Leu Leu Arg Leu Arg Gly Glu Pro Pro Leu Thr Arg Phe 
        275                 280                 285             


Leu Ala Glu Gln Leu Cys Thr Pro His Trp Tyr Ser Met Glu Pro Ala 
    290                 295                 300                 


Arg Arg Asp Phe Gly Tyr Val Pro Gln Val Ser Ile Glu Glu Gly Leu 
305                 310                 315                 320 


Arg Arg Leu Lys Ala Ser Ser Ala Ala 
                325                 


<210> 24
<211> 993
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic polynucleotide

<400> 24
atgaagattc tggtgacggg cggtggcggt ttcctgggtc aggcactgtg tcgcggtctg       60

gttgagcgtg gtcaccaagt tctggctttc aatcgtagcc actatccgga actgcaagca      120

atgggtgttg gtcagattcg tggcgacctg gcagatgcgc aggcagttct gcacgccgtc      180

gccggtgttg acgccgtctt tcataacggt gccaaagctg gcgcatgggg cagctatgat      240

tcttaccacc aggcgaacgt tgtgggcacc gacaacgtta ttgcggcgtg ccgcgcacac      300

gacatcagcc gtttggtcta taccagcacc ccgagcgtca cgcatcgtgc cacgcacccg      360

gtcgagggcc tgggtgccga cgatgtccca tacggcgagg attttcaggc cccatacgcg      420

gcgaccaaag caattgcgga gcagcgcgtg ctggcggcga atgatgctac gctggcaacc      480

gtggccctgc gtccacgtct gatttggggt ccgggtgacc aacagctggt cccgcgtttg      540

gccgagcgtg cgcgccaagg ccgtttgcgt ctggttggtg atggtaacaa caaagttgat      600

accacctata tcgacaatgc ggcgctggca cacttcctgg ctttggacgc cctggcaccg      660

ggtgcagcgt gtgcaggtcg cgcatacttt atcagcaatg gcgagccact gccgatgcgc      720

gagctggtca ataagctgct ggcagcggtg ggtgccccta ctgtggacaa ggcgattagc      780

ttcaaaaccg cgtatcgcat cggtgcggtg tgtgagcgtt tgtggccgct gctgcgtctg      840

cgtggtgaac cgccgctgac tcgtttcttg gcagagcagc tgtgcacccc gcactggtac      900

agcatggaac ctgcccgtcg tgactttggt tacgtcccgc aagttagcat cgaagagggt      960

ttgcgccgtc tgaaagcttc ttctgcagct tag                                   993


