                         SEQUENCE LISTING

<110>  University of Rochester
       Miller, Benjamin L.
       McNaughton, Brian R.
       Gareiss, Peter C.
       Wedekind, Joseph
       Thornton, Charles
       Sobczak, Krzysztof
 
<120>  NUCLEIC ACID BINDING COMPOUNDS AND METHODS OF USE

<130>  176/62261

<150>  60/952,104
<151>  2007-07-26

<160>  13    

<170>  PatentIn version 3.5

<210>  1
<211>  22
<212>  RNA
<213>  Artificial

<220>
<223>  HIV-1 frameshifting stem-loop

<400>  1
ggccuuccca caagggaagg cc                                                22


<210>  2
<211>  22
<212>  DNA
<213>  Artificial

<220>
<223>  DNA sequence corresponding to SEQ ID NO: 1

<400>  2
ggccttccca caagggaagg cc                                                22


<210>  3
<211>  16
<212>  RNA
<213>  Artificial

<220>
<223>  control sequence with replaced stem and loop

<400>  3
uagucuucgu agacua                                                       16


<210>  4
<211>  22
<212>  RNA
<213>  Artificial

<220>
<223>  control sequence with replaced loop

<400>  4
ggccuucccc accgggaagg cc                                                22


<210>  5
<211>  52
<212>  RNA
<213>  Artificial

<220>
<223>  HIV-1 mRNA -1 ribosomal frameshift sequence

<400>  5
uuuuuuaggg aagaucuggc cuuccuacaa gggaaggcca gggaauuuuc uu               52


<210>  6
<211>  30
<212>  RNA
<213>  Artificial

<220>
<223>  CUG repeat decamer

<400>  6
cugcugcugc ugcugcugcu gcugcugcug                                        30


<210>  7
<211>  36
<212>  RNA
<213>  Artificial

<220>
<223>  CUG repeat decamer

<400>  7
ccgcugcugc ugcugcugcu gcugcugcug cugcgg                                 36


<210>  8
<211>  333
<212>  RNA
<213>  Artificial

<220>
<223>  CUG repeat 109-mer

<400>  8
gggcugcugc ugcugcugcu gcugcugcug cugcugcugc ugcugcugcu gcugcugcug       60

cugcugcugc ugcugcugcu gcugcugcug cugcugcugc ugcugcugcu gcugcugcug      120

cugcugcugc ugcugcugcu gcugcugcug cugcugcugc ugcugcugcu gcugcugcug      180

cugcugcugc ugcugcugcu gcugcugcug cugcugcugc ugcugcugcu gcugcugcug      240

cugcugcugc ugcugcugcu gcugcugcug cugcugcugc ugcugcugcu gcugcugcug      300

cugcugcugc ugcugcugcu gcugcugcug ggg                                   333


<210>  9
<211>  30
<212>  RNA
<213>  Artificial

<220>
<223>  CUG repeat trimer in stem only

<400>  9
ccgcugcugc ugggcaaccu gcugcugcgg                                        30


<210>  10
<211>  19
<212>  RNA
<213>  Artificial

<220>
<223>  CUG-CAG based-paired stem

<400>  10
ccagcuggca accagcugg                                                    19


<210>  11
<211>  14
<212>  RNA
<213>  Artificial

<220>
<223>  CUG loop sequence

<400>  11
cgcgcugcug cgcg                                                         14


<210>  12
<211>  9
<212>  DNA
<213>  Artificial

<220>
<223>  repeat sequence associated with diabetes mellitus


<220>
<221>  misc_feature
<222>  (9)..(9)
<223>  N at position 9 is G or C

<400>  12
acaggggtn                                                                9


<210>  13
<211>  12
<212>  DNA
<213>  Artificial

<220>
<223>  repeat sequence associated with myoclonus epilepsy

<400>  13
ccccgccccg cg                                                           12


