SEQUENCE LISTING

<110> Dameron, Charles

<120> SELF-ASSEMBLED PROTEINS AND RELATED METHODS AND PROTEIN STRUCTURES

<130> 049450-00235-1-1

<140> US 11/805,188
<141> 2007-05-22

<150> US 11,751,850
<151> 2007-05-22

<150> US 60/808,232
<151> 2006-05-24

<160> 36

<170> Microsoft Word

<210> 1
<211> 12
<212> PRT
<213> Artificial

<220>
<223> derived from Homo sapiens

<220>
<221> MISC_FEATURE
<222> (2)..(2)
<223> xaa is any naturally occurring amino acid

<220>
<221> MISC_FEATURE
<222> (4)..(9)
<223> xaa is any naturally occurring amino acid; this group represents 4-6 amino acids and some may be missing and in a preferred embodiment this group represents 4 amino acids

<220>
<221> MISC_FEATURE
<222> (11)..(11)
<223> xaa is any naturally occurring amino acid

<400> 1

Cys Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Cys Xaa Cys
1               5                   10

<210> 2
<211> 38
<212> PRT
<213> Artificial


<220>
<223> derived from Homo sapiens

<400> 2

Ala Thr Leu Thr Gln Glu Asp Ile Gln Gln Ile Met Lys Gln Leu Asn Lys Lys 
1               5                   10                  15            

Glu Pro Val Glu Thr Ile Glu Cys Asn Cys Ile Pro Gly Gln Cys Glu Cys Lys 
    20                  25                  30                  35

Lys Gln

<210> 3
<211> 38
<212> PRT
<213> Artificial


<220>
<223> derived from Homo sapiens

<400> 3

Leu Ser Gln Thr Asp Ile Leu Gln Leu Gln Gln Leu Leu Thr Ala Lys Ala Ala 
1               5                   10                  15


Thr Ala Pro Glu Lys Val Ala Cys Asp Cys Leu Pro Asn Lys Cys Asp Cys Glu 
    20                  25                  30                  35

Lys Glu 

<210> 4
<211> 38
<212> PRT
<213> Artificial

<220>
<223> derived from Homo sapiens

<400> 4

Met Thr Leu Ser Asp Ile Glu Lys Leu Glu Ala Leu Leu Leu Ser Lys Lys Ala 
1               5                   10                  15

Asn Ala Val Pro Glu Val Lys Cys Asn Cys Ile Val Gly Gln Cys Ser Cys Tyr 
    20                  25                  30                  35

Glu His 

<210> 5
<211> 38
<212> PRT
<213> Artificial

<220>
<223> derived from Homo sapiens

<400> 5

Ser Leu Thr Glu Gln Val Ser Arg Leu Asp Ile Asp Asp Asn Asp Met Gly Leu 
1               5                   10                  15

Gly Gly Ser Glu Thr Met Glu Cys Lys Cys Gly Met Pro Leu Cys Ile Cys Val 
    20                  25                  30                  35

Ala Pro

<210> 6
<211> 38
<212> PRT
<213> Artificial

<220>
<223> derived from Homo sapiens

<400> 6

Leu Ser Leu Gly Lys Glu Asp Asp Ser Ser Pro Met Lys Asn Ser Thr Val Gln 
1               5                   10                  15

Ser Thr Ala Ala Leu Ile Glu Cys Lys Cys Gly Met Pro Leu Cys Ile Cys Glu 
    20                  25                  30                  35

Ala Pro 

<210> 7
<211> 38
<212> PRT
<213> Artificial

<220>
<223> derived from Homo sapiens

<400> 7

Leu Asn Leu Gly Glu Asp Asp Ala Ser Ser Pro Met Lys Asn Ser Ala Phe His 
1               5                   10                  15

Ser Ala Pro Ala Val Ile Glu Cys Lys Cys Gly Met Pro Leu Cys Ile Cys Glu 
    20                  25                  30                  35

Ala Pro

<210> 8
<211> 38
<212> PRT
<213> Artificial

<220>
<223> derived from Homo sapiens


<400> 8

Leu Tyr Gly Asp Ala Glu Lys Pro Ala Glu Ser Gly Gly Ser Gln Pro Pro Arg
1               5                   10                  15

Ala Ala Ala Arg Lys Ala Ala Cys Ala Cys Asp Gln Lys Pro Cys Ser Cys Ser 
    20                  25                  30                  35

Lys Val 

<210> 9
<211> 38
<212> PRT
<213> Artificial

<220>
<223> derived from Homo sapiens

<400> 9

Leu Tyr Gly Asp Ser Gly Lys Pro Ala Glu Gly Gly Gly Ser Val Thr Ser Arg 
1               5                   10                  15

Ala Ala Thr Gly Lys Val Ala Cys Thr Cys Asp Gln Lys Pro Cys Asn Cys Pro 
    20                  25                  30                  35

Lys Gly

<210> 10
<211> 38
<212> PRT
<213> Artificial

<220>
<223> derived from Homo sapiens

<400> 10

Val Pro Gln Ala Ser Leu Lys Ala Ser Asp Leu Ser Asp Phe Gln Ser Val Ser 
1               5                   10                  15

Lys Leu Asn Gln Gly Lys Pro Cys Thr Cys Ile Gly Lys Glu Cys Gln Cys Lys 
    20                  25                  30                  35

Arg Trp

<210> 11
<211> 38
<212> PRT
<213> Artificial

<220>
<223> derived from Homo sapiens




<400> 11

Val Ser Pro Glu Ser Leu Thr Ala Asn Asp Leu Ser Asp Phe Gln Ser Val Ser 
1               5                   10                  15

Lys Leu Ser Gln Gly Lys Pro Cys Val Cys Val Gly Lys Ala Cys Gln Cys Lys 
    20                  25                  30                  35

Arg Trp

<210> 12
<211> 38
<212> PRT
<213> Artificial

<220>
<223> derived from Homo sapiens

<400> 12

Ala Ser Pro Ala Ser Leu Thr Ala Ser Gln Pro Ser Asp Phe Gln Ser Val Ser 
1               5                   10                  15

Ile Leu Gly Thr Ala Ala Glu Cys Thr Cys Asp Glu Lys Glu Cys Gln Cys Lys 
    20                  25                  30                  35

Asn Cys

<210> 13
<211> 294
<212> DNA
<213> Artificial


<220>
<223> derived from Homo sapiens

<220>
<221> CDS
<222> (1)..(95)

<220>
<221> CDS
<222> (98)..(98)

<400> 13

cat atg cag tat aaa ctg att ctg aac ggc aaa ccc ctg aaa ggc gaa      48
His Met Gln Tyr Lys Leu Ile Leu Asn Gly Lys Thr Leu Lys Gly Glu 
1               5                   10                  15

acc acc acc gaa gcg gtg gat gcg gcg acc gcg gaa aaa gtg ttt aaa      96
Thr Thr Thr Glu Ala Val Asp Ala Ala Thr Ala Glu Lys Val Phe Lys
            20                  25                  30

cag tat gcg aat gat aat ggc gtg gat ggc gaa tgg acc tat gat gat     144
Gln Tyr Ala Asn Asp Asn Gly Val Asp Gly Glu Trp Thr Tyr Asp Asp
        35                  40                  45

gcg acc aaa acc ttt acc gtg acc gaa gcg caa ttg acc cag gaa gat     192
Ala Thr Lys Thr Phe Thr Val Thr Glu Ala Gln Leu Thr Gln Glu Asp
    50                  55                  60



att cag cag att atg aaa caa ttg aat aaa aaa gaa ccg gtg gaa acc     240
Ile Gln Gln Ile Met Lys Gln Leu Asn Lys Lys Glu Pro Val Glu Thr
65                  70                  75                  80

att gaa tgc aac tgc att ccg ggc cag tgc gaa tgc aaa aaa cag taa    288
Ile Glu Cys Asn Cys Ile Pro Gly Gln Cys Glu Cys Lys Lys Gln
                85                  90                  95

tga tca                                                            294
    Ser

<210> 14
<211> 10
<212> PRT
<213> Artificial


<220>
<223> derived from bacteria

<400> 14

Cys Asn Cys Leu Pro Gly Gln Cys His Cys 
1               5                   10



<210> 15
<211> 12
<212> PRT
<213> Artificial


<220>
<223> derived from bacteria or plants

<220>
<221> MISC_FEATURE
<222> (2)..(2)
<223> xaa is any naturally occurring amino acid

<220>
<221> MISC_FEATURE
<222> (5)..(7)
<223> xaa is any naturally occurring amino acid

<220>
<221> MISC_FEATURE
<222> (9)..(9)
<223> xaa is any naturally occurring amino acid

<220>
<221> MISC_FEATURE
<222> (11)..(11)
<223> xaa is any naturally occurring amino acid

<400> 15

Cys Xaa Cys Pro Xaa Xaa Xaa Pro Xaa Cys Xaa Cys 
1               5                   10

<210> 16
<211> 11
<212> PRT
<213> Artificial

<220>
<223> derived from bacteria

<400> 16

Cys Thr Cys Pro Ser Ile Asp Ala Cys Thr Cys
1               5                   10

<210> 17
<211> 11
<212> PRT
<213> Artificial

<220>
<223> derived from archaean

<400> 17

Cys Lys Cys Arg Asp Ser Pro Phe Cys Gly Cys
1               5                   10

<210> 18
<211> 11
<212> PRT
<213> Artificial

<220>
<223> derived from eukaryotes

<220>
<221> MISC_FEATURE
<222> (2)..(2)
<223> xaa is any naturally occurring amino acid

<220>
<221> MISC_FEATURE
<222> (4)..(5)
<223> xaa is any naturally occurring amino acid

<220>
<221> MISC_FEATURE
<222> (10)..(10)
<223> xaa is any naturally occurring amino acid

<400> 18

Cys Xaa Cys Xaa Xaa Gln Lys Pro Cys Xaa Cys
1               5                   10

<210> 19
<211> 12
<212> PRT
<213> Artificial


<220>
<223> derived from eukaryotes


<400> 19

Cys Gln Cys Gly Pro Lys Phe Pro Glu Cys Asn Cys
1               5                   10

<210> 20
<211> 12
<212> PRT
<213> Artificial

<220>
<223> derived from eukaryotes


<400> 20

Cys Asp Cys Arg Pro Gly Gln Lys Lys Cys Thr Cys
1               5                   10

<210> 21
<211> 11
<212> PRT
<213> Artificial

<220>
<223> > derived from eukaryotes

<400> 21

Cys Asp Cys Lys Asn Asp Ala Asn Cys Asp Cys
1               5                   10

<210> 22
<211> 11
<212> PRT
<213> Artificial

<220>
<223> derived from eukaryotes




<400> 22

Cys Gln Cys Pro Ala Val Val Cys Cys Arg Cys
1               5                   10

<210> 23
<211> 6
<212> PRT
<213> Artificial

<220>
<223> Homo sapiens

<220>
<221> MISC_FEATURE
<222> (4)..(4)

<223> xaa can represent Lys or Arg

<400> 23

Leu Val Pro Xaa Gly Ser
1               5 

<210> 24
<211> 58
<212> PRT
<213> Artificial


<220>
<223> derived from E. hirae

<400> 24

Leu Phe Ser His Ile Cys Ala Lys Arg Val Gly Ala Thr Ile Ala Asp Leu Val 
1               5                   10                  15

Glu Glu Ala Thr Leu Thr Gln Gly Asp Ile Gln Gln Ile Met Lys Gln Leu Asn 
    20                  25                  30                  35

Lys Lys Glu Pro Val Gly Thr Ile Gly Cys Asn Cys Ile Pro Gly Gln Cys Gly 
            40                  45                  50

Cys Lys Lys Gln
55

<210> 25
<211> 59
<212> PRT
<213> Artificial

<220>
<223> derived from Lactobacillus sakei



<400> 25

Glu His Leu Cys Gly Met Lys Lys Gly Gln Thr Leu Ala Ala Leu Ile Asp Gln 
1                5                  10                  15

Thr Thr Leu Ser Gln Thr Asp Ile Leu Gln Leu Gln Gln Leu Leu Thr Ala Lys 
    20                  25                  30                  35

Ala Ala Thr Ala Pro Glu Lys Val Ala Cys Asp Cys Leu Pro Asn Lys Cys Asp 
            40                  45                  50

Cys Glu Lys Glu Glu 
55

<210> 26
<211> 59
<212> PRT
<213> Artificial

<220>
<223> derived from Streptococcus mutans

<400> 26

Ser Arg Ile Cys Val Thr Lys His Gln Ala Leu Ile Arg His Leu Val Glu Glu 
1               5                   10                  15

Thr Pro Met Thr Leu Ser Asp Ile Glu Lys Leu Glu Ala Leu Leu Leu Ser Lys 
    20                  25                  30                  35

Lys Ala Asn Ala Val Pro Glu Val Lys Cys Asn Cys Ile Val Gly Gln Cys Ser 
            40                  45                  50

Cys Tyr Glu His Leu 
55

<210> 27
<211> 47
<212> PRT
<213> Artificial


<220>
<223> derived from Arabidopsis thaliana

<400> 27

Met Leu Phe Ser Asn Lys Val Asn Ser Leu Thr Glu Gln Val Ser Arg Leu Asp 
1               5                   10                  15

Ile Asp Asp Asn Asp Met Gly Leu Gly Gly Ser Glu Thr Met Glu Cys Lys Cys 
    20                  25                  30                  35

Gly Met Pro Leu Cys Ile Cys Val Ala Pro Pro
            40                  45

<210> 28
<211> 59
<212> PRT
<213> Artificial

<220>
<223> derived from Zea mays

<400> 28

His Ala Asp Asn Pro Val Ser Ala Gly Ser Ile Ser Gly Ala Ala Asp Ser Phe 
1               5                   10                  15

Ser Gly Leu Ser Leu Gly Lys Glu Asp Asp Ser Ser Pro Met Lys Asn Ser Thr 
    20                  25                  30                  35

Val Gln Ser Thr Ala Ala Leu Ile Glu Cys Lys Cys Gly Met Pro Leu Cys Ile 
            40                  45                  50

Cys Glu Ala Pro Lys
55

<210> 29
<211> 59
<212> PRT
<213> Artificial

<220>
<223> derived from Oryza sativa

<400> 29

Gly Val Gly Asn Ala Gly Ser Pro Gly Ser Val Ser Ser Ala Ala Asp Ser Phe 
1               5                   10                  15

Ser Gly Leu Asn Leu Gly Glu Asp Asp Ala Ser Ser Pro Met Lys Asn Ser Ala 
    20                  25                  30                  35

Phe His Ser Ala Pro Ala Val Ile Glu Cys Lys Cys Gly Met Pro Leu Cys Ile 
            40                  45                  50

Cys Glu Ala Pro Lys 
55

<210> 30
<211> 59
<212> PRT
<213> Artificial

<220>
<223> derived from Homo sapiens

<400> 30

Ala Trp Cys Gln Val Ala Gln Lys Phe Thr Gly Gly Ile Gly Asn Lys Leu Cys 
1               5                   10                  15

Ala Leu Leu Tyr Gly Asp Ala Glu Lys Pro Ala Glu Ser Gly Gly Ser Gln Pro 
    20                  25                  30                  35

Pro Arg Ala Ala Ala Arg Lys Ala Ala Cys Ala Cys Asp Gln Lys Pro Cys Ser 
            40                  45                  50

Cys Ser Lys Val Asp 
55

<210> 31
<211> 59
<212> PRT
<213> Artificial

<220>
<223> derived from Rattus norvegicus

<400> 31

Ala Trp Cys Gln Val Ala Gln Lys Phe Thr Gly Gly Ile Gly Asn Lys Leu Cys 
1               5                   10                  15

Ala Leu Leu Tyr Gly Asp Ser Glu Lys Pro Ala Glu Ser Gly Gly Ser Val Thr 
    20                  25                  30                  35

Ser Arg Ala Ala Thr Arg Lys Val Ala Cys Thr Cys Asp Gln Lys Pro Cys Ser 
            40                  45                  50

Cys Pro Lys Gly Asp
55

<210> 32
<211> 59
<212> PRT
<213> Artificial

<220>
<223> derived from Mus musculus

<400> 32

Ala Trp Cys Gln Val Ala Gln Lys Phe Thr Gly Gly Ile Gly Asn Lys Leu Cys 
1               5                   10                  15

Ala Leu Leu Tyr Gly Asp Ser Gly Lys Pro Ala Glu Gly Gly Gly Ser Val Thr 
    20                  25                  30                  35

Ser Arg Ala Ala Thr Gly Lys Val Ala Cys Thr Cys Asp Gln Lys Pro Cys Asn 
            40                  45                  50

Cys Pro Lys Gly Asp

55

<210> 33
<211> 59
<212> PRT
<213> Artificial

<220>
<223> derived from Mus musculus

<400> 33

Thr Ser Val Pro Arg Leu Pro Ser Glu Ser Lys Lys Glu Asp Ser Ser Asp Ala 
1               5                   10                  15

Thr Gln Val Pro Gln Ala Ser Leu Lys Ala Ser Asp Leu Ser Asp Phe Gln Ser 
    20                  25                  30                  35

Val Ser Lys Leu Asn Gln Gly Lys Pro Cys Thr Cys Ile Gly Lys Glu Cys Gln 
            40                  45                  50


Cys Lys Arg Trp His
55


<210> 34
<211> 59
<212> PRT
<213> Artificial

<220>
<223> derived from Rattus norvegicus


<400> 34

Ser Ser Val Leu Arg Leu Pro Ser Glu Ser Lys Thr Glu Glu Leu Ser Asp Ala 
1               5                   10                  15

Thr Gln Val Ser Pro Glu Ser Leu Thr Ala Asn Asp Leu Ser Asp Phe Gln Ser 
    20                  25                  30                  35

Val Ser Lys Leu Ser Gln Gly Lys Pro Cys Val Cys Val Gly Lys Ala Cys Gln 
            40                  45                  50

Cys Lys Arg Trp His
55

<210> 35
<211> 59
<212> PRT
<213> Artificial

<220>
<223> derived from Mus musculus

<400> 35

Ser Ser Val Leu Arg Leu Pro Ser Glu Ser Lys Thr Glu Glu Leu Ser Asp Ala
1               5                   10                  15

Thr Gln Val Ser Gln Glu Ser Leu Thr Ala Asn Asp Leu Ser Asp Phe Gln Ser 
    20                  25                  30                  35

Val Ser Lys Leu Ser Gln Gly Lys Pro Cys Val Cys Val Gly Lys Glu Cys Gln 
            40                  45                  50

Cys Lys Arg Trp His
55

<210> 36
<211> 59
<212> PRT
<213> Artificial

<220>
<223> derived from X. tropicalis

<400> 36

Ser Ser Val Leu Arg Leu Pro Ser Glu Ser Lys Thr Glu Glu Leu Ser Asp Ala
1               5                   10                  15

Thr Gln Val Ser Gln Glu Ser Leu Thr Ala Asn Asp Leu Ser Asp Phe Gln Ser 
    20                  25                  30                  35
Val Ser Lys Leu Ser Gln Gly Lys Pro Cys Val Cys Val Gly Lys Glu Cys Gln 
            40                  45                  50

Cys Lys Arg Trp His
55

