                         SEQUENCE LISTING

<110>  VERIDEX, LLC
       BADEN, Jonathan F.
       MAZUMDER, Abhijit
       VENER, Tatiana
       MEHROTRA, Jyoti
       VARDE, Shobha
       PAINTER, Jennifer
 
<120>  METHODS OF DETECTING METHYLATION PATTERNS WITHIN A CpG ISLAND

<130>  VDX5043

<150>  60/889,944
<151>  2007-02-15

<160>  24    

<170>  PatentIn version 3.4

<210>  1
<211>  497
<212>  DNA
<213>  human

<400>  1
aatttttttt tttttaagcg gtttttattt tttttttttg ttttgtgaag cgggtgtgta     60

agtttcggga tcgtagcggt tttagggaat tttttttcgc gatgtttcgg cgcgttagtt    120

cgttgcgtat atttcgttgc ggtttttttt ttgttgtttg tttatttttt aggtttcgtt    180

ggggatttgg gaaagaggga aaggtttttt cggttagttg cgcggcgatt tcggggattt    240

tagggcgttt ttttgcggtc gacgttcggg gtgtagcggt cgtcggggtt ggggtcggcg    300

ggagttcgcg ggatttttta gaagagcggt cggcgtcgtg atttagtatt ggggcggagc    360

ggggcgggat tatttttata aggttcggag gtcgcgaggt tttcgttgga gtttcgtcgt    420

cgtagttttc gttattagtg agtacgcgcg gttcgttttt cggggatggg gtttagagtt    480

tttagtatgg ggttaat                                                   497


<210>  2
<211>  106
<212>  DNA
<213>  human

<400>  2
cggggcggga ttatttttat aaggttcgga ggtcgcgagg ttttcgttgg agtttcgtcg     60

tcgtagtttt cgttattagt gagtacgcgc ggttcgcgtt ttcggg                   106


<210>  3
<211>  106
<212>  DNA
<213>  human

<400>  3
cggggcggga ttatttttat aaggttcgga ggtcgcgagg ttttcgttgg agtttcgtcg     60

tcgtagtttt cgttattagt gagtacgcgc ggttcgcgtt ttcggg                   106


<210>  4
<211>  106
<212>  DNA
<213>  human

<400>  4
cggggcggga ttatttttat aaggttcgga ggtcgcgagg ttttcgttgg agtttcgtcg     60

tcgtagtttt cgttattagt gagtacgcgc ggttcgcgtt ttcggg                   106


<210>  5
<211>  106
<212>  DNA
<213>  human

<400>  5
cggggcggga ttatttttat aaggttcgga ggtcgcgagg ttttcgttgg agtttcgtcg     60

tcgtagtttt cgttattagt gagtacgcgc ggttcgcgtt ttcggg                   106


<210>  6
<211>  106
<212>  DNA
<213>  human

<400>  6
cggggcggga ttatttttat aaggttcgga ggtcgcgagg ttttcgttgg agcttcgtcg     60

tcgtagtttt cgttattagt gagtacgcgc ggttcgcgtt ttcggg                   106


<210>  7
<211>  86
<212>  DNA
<213>  human

<400>  7
tgtagtggtt gttggggttg gggttggtgg gagtttgtgg gattttttag aagagtggtt     60

ggtgttgtga tttagtattg gggcgg                                          86


<210>  8
<211>  86
<212>  DNA
<213>  human

<400>  8
tgtagtggtc gtcggggttg gggtcggtgg gagttcgcgg gattttttag gagagcggtc     60

ggcgtcgtga tttagtattg gggcgg                                          86


<210>  9
<211>  86
<212>  DNA
<213>  human

<400>  9
tgtagcggtc gtcggggtta gggccggcgg gagttcgcgg gattttttag aagagcggtc     60

ggcgtcgtga tttagtattg gggcgg                                          86


<210>  10
<211>  86
<212>  DNA
<213>  human

<400>  10
tgtagcggtc gtcggggttg gggtcggcgg gagttcgcgg gattttttag aagagcggtc     60

ggcgtcgtga tttagtattg gggcgg                                          86


<210>  11
<211>  86
<212>  DNA
<213>  human

<400>  11
tgtagcggtc gtcggggttg gggtcggcgg gagttcgcgg gattttttag aagagcggtc     60

ggcgtcgtga tttagtattg gggcgg                                          86


<210>  12
<211>  92
<212>  DNA
<213>  human

<400>  12
tgaagtggtt gtgtaagttt tgggattgta gtggttttag ggaatttttt tttgtgatgt     60

tttggtgtgt tagtagttgt gtatattttg tt                                   92


<210>  13
<211>  92
<212>  DNA
<213>  human

<400>  13
tgaagtggtt gtgtaagttt tgggattgta gtggttttag ggaatttttt tttgtgatgt     60

tttggtgtgt tagtagttgt gtatattttg tt                                   92


<210>  14
<211>  92
<212>  DNA
<213>  human


<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (10)..(10)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (12)..(12)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (14)..(14)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (29)..(30)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (38)..(39)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (52)..(52)
<223>  n is a, c, g, or t

<400>  14
tgangcggtn gngnaagttt cgggatcgnn gcggtttnng ggaatttttt tntgcgatgt     60

ttcggcgcga tagtagttgt gtatatttcg tt                                   92


<210>  15
<211>  92
<212>  DNA
<213>  human

<400>  15
tgaagcggtt gtgtaagttt cgggatcgta gcggttttag ggaatttttt tttgcgatgt     60

ttcggcgcgt tagtagttgt gtatatttcg tt                                   92


<210>  16
<211>  92
<212>  DNA
<213>  human

<400>  16
tgaagcggtt gtgtaagttt cgggatcgta gcggttttag ggaatttttt ttcgcgatgt     60

ttcggcgcgt tagtagttgt gtatatttcg tt                                   92


<210>  17
<211>  47
<212>  DNA
<213>  human

<400>  17
cgcacggcga actcccgccg acgtgcgtgt agcggtcgtc ggggttg                   47


<210>  18
<211>  22
<212>  DNA
<213>  human

<400>  18
gccccaatac taaatcacga cg                                              22


<210>  19
<211>  44
<212>  DNA
<213>  human

<400>  19
ccggtcgcga ggttttcgac cggccgaaaa acgaaccgcg cgta                      44


<210>  20
<211>  27
<212>  DNA
<213>  human

<400>  20
gggcgggatt atttttataa ggttcgg                                         27


<210>  21
<211>  48
<212>  DNA
<213>  human

<400>  21
cggccctaaa accgctacga gggccggaag cgggtgtgta agtttcgg                  48


<210>  22
<211>  26
<212>  DNA
<213>  human

<400>  22
acgaaatata cgcaacgaac taacgc                                          26


<210>  23
<211>  52
<212>  DNA
<213>  human

<400>  23
ccgcgcatca ccaccccaca cgcgcgggga gtatataggt tggggaagtt tg             52


<210>  24
<211>  27
<212>  DNA
<213>  human

<400>  24
aacacacaat aacaaacaca aattcac                                         27


