Table 6.3. List of significantly associated haplotypes based on the Crohn's disease genome wide
scan (GWS) results using the German Population. Individual haplotypes with associated
relative risks are presented in each row of the table; these values were extracted from the
associated marker haplotype window with the most significant p value for each SNP in Table 6.2. The
first column lists the region ID as presented in Table 1. The Haplotype column lists the specific
nucleotides for the individual SNP alleles contributing to the haplotype reported. The Case and
Control columns correspond to the numbers of cases and controls, respectively, containing the
haplotype variant noted in the Haplotype column. The Total Case and Total Control columns list the
total numbers of cases and controls for which genotype data was available for the haplotype in
question. The RR column gives the relative risk for each particular haplotype. The remainder of the
columns lists the SeqIDs for the SNPs contributing to the haplotype and their relative location
with respect to the central marker. The Central marker (0) column lists the SeqID for the central
marker on which the haplotype is based. Flanking markers are identified by minus (-) or plus (+)
signs to indicate the relative location of flanking SNPs.

Region ID   Haplotype   Case   Control   TotalCase   TotalControl   RR      Central Marker (-4)   Central Marker (-3)   Central Marker (-2)   Central Marker (-1)   Central Marker (0)   Central Marker (1)   Central Marker (2)   Central Marker (3)   Central Marker (4)   
372         C           364    432       764         764            0.700                                                                                           10817                
372         T           400    332       764         764            1.430                                                                                           10817                
372         C           513    593       764         764            0.590                                                                                           10818                
372         T           251    171       764         764            1.700                                                                                           10818                
372         G           208    143       764         764            1.620                                                                                           10821                
372         A           556    621       764         764            0.620                                                                                           10821                
372         A           555    620       764         764            0.620                                                                                           10823                
372         G           209    144       764         764            1.620                                                                                           10823                
372         A           209    144       764         764            1.620                                                                                           10825                
372         G           555    620       764         764            0.620                                                                                           10825                
372         C           435    391       764         764            1.260                                                                                           10828                
372         T           329    373       764         764            0.790                                                                                           10828                
372         A           324    270       764         764            1.350                                                                                           10829                
372         G           440    494       764         764            0.740                                                                                           10829                
372         A           308    251       764         764            1.380                                                                                           10831                
372         C           456    513       764         764            0.720                                                                                           10831                
372         A           324    272       764         764            1.330                                                                                           10833                
372         G           440    492       764         764            0.750                                                                                           10833                
372         G           461    515       764         764            0.740                                                                                           10838                
372         A           303    249       764         764            1.360                                                                                           10838                
372         A           195    164       764         764            1.250                                                                                           10842                
372         C           569    600       764         764            0.800                                                                                           10842                
372         A           164    185       764         764            0.860                                                                                           10852                
372         G           600    579       764         764            1.170                                                                                           10852                
373         C           691    719       764         764            0.590                                                                                           11211                
373         T           73     45        764         764            1.690                                                                                           11211                
373         A           161    126       764         764            1.350                                                                                           11212                
373         G           603    638       764         764            0.740                                                                                           11212                
373         C           441    511       764         764            0.680                                                                                           11214                
373         T           323    253       764         764            1.480                                                                                           11214                
373         C           691    720       764         764            0.580                                                                                           11215                
373         T           73     44        764         764            1.730                                                                                           11215                
374         GTGCCAGGT   24     36        764         764            0.660   11919                 11920                 11921                 11922                 11925                11926                11929                11930                11931                
374         GCATTGGAT   49     64        764         764            0.750   11919                 11920                 11921                 11922                 11925                11926                11929                11930                11931                
374         GCGTTGAGC   12     4         764         764            3.030   11919                 11920                 11921                 11922                 11925                11926                11929                11930                11931                
374         CATTGGATG   54     68        764         764            0.780   11920                 11921                 11922                 11925                 11926                11929                11930                11931                11932                
374         TGCCAGGTG   24     37        764         764            0.640   11920                 11921                 11922                 11925                 11926                11929                11930                11931                11932                
374         CGTTGGATG   23     38        764         764            0.590   11920                 11921                 11922                 11925                 11926                11929                11930                11931                11932                
374         CGTTGAGCT   13     5         764         764            2.630   11920                 11921                 11922                 11925                 11926                11929                11930                11931                11932                
374         CGTTGGATT   21     6         764         764            3.570   11920                 11921                 11922                 11925                 11926                11929                11930                11931                11932                
374         TTGGATG     77     107       764         764            0.690                         11922                 11925                 11926                 11929                11930                11931                11932                
374         CCAGGTG     27     39        764         764            0.680                         11922                 11925                 11926                 11929                11930                11931                11932                
374         TTGGATT     29     10        764         764            2.970                         11922                 11925                 11926                 11929                11930                11931                11932                
374         TTGAGCT     71     55        764         764            1.320                         11922                 11925                 11926                 11929                11930                11931                11932                
374         TTAAGCG     8      3         764         764            2.680                         11922                 11925                 11926                 11929                11930                11931                11932                
374         CCAGATGCT   8      2         764         764            4.030   11922                 11925                 11926                 11929                 11930                11931                11932                11933                11934                
374         TTAAGCGCC   8      3         764         764            2.680   11922                 11925                 11926                 11929                 11930                11931                11932                11933                11934                
374         TTGGATTTT   30     11        764         764            2.800   11922                 11925                 11926                 11929                 11930                11931                11932                11933                11934                
374         CCAGGTGCC   27     39        764         764            0.680   11922                 11925                 11926                 11929                 11930                11931                11932                11933                11934                
374         TTGAGCTTT   70     54        764         764            1.330   11922                 11925                 11926                 11929                 11930                11931                11932                11933                11934                
374         TTGGATGCC   76     106       764         764            0.690   11922                 11925                 11926                 11929                 11930                11931                11932                11933                11934                
374         TGGATGCCT   76     104       764         764            0.700   11925                 11926                 11929                 11930                 11931                11932                11933                11934                11935                
374         CAGATGCTC   8      2         764         764            4.030   11925                 11926                 11929                 11930                 11931                11932                11933                11934                11935                
374         TAAGCGCCT   7      3         764         764            2.350   11925                 11926                 11929                 11930                 11931                11932                11933                11934                11935                
374         TGGATTTTC   30     10        764         764            3.080   11925                 11926                 11929                 11930                 11931                11932                11933                11934                11935                
374         TGAGCTTTC   71     55        764         764            1.320   11925                 11926                 11929                 11930                 11931                11932                11933                11934                11935                
374         CAGGTGCCC   25     35        764         764            0.700   11925                 11926                 11929                 11930                 11931                11932                11933                11934                11935                
374         GGTGCCC     25     35        764         764            0.700                         11929                 11930                 11931                 11932                11933                11934                11935                
374         AGCTTTC     71     57        764         764            1.270                         11929                 11930                 11931                 11932                11933                11934                11935                
374         GATTTTC     33     15        764         764            2.250                         11929                 11930                 11931                 11932                11933                11934                11935                
374         GATGCTC     8      2         764         764            4.030                         11929                 11930                 11931                 11932                11933                11934                11935                
374         GATGCCT     603    631       764         764            0.790                         11929                 11930                 11931                 11932                11933                11934                11935                
374         TGCTC       8      2         764         764            4.030                                               11931                 11932                 11933                11934                11935                
374         TGCCC       25     42        764         764            0.580                                               11931                 11932                 11933                11934                11935                
374         TTTTC       33     15        764         764            2.250                                               11931                 11932                 11933                11934                11935                
374         TGCCT       606    635       764         764            0.780                                               11931                 11932                 11933                11934                11935                
374         CTTTC       71     57        764         764            1.270                                               11931                 11932                 11933                11934                11935                
374         TGCCCCC     25     42        764         764            0.580                         11931                 11932                 11933                 11934                11935                11936                11937                
374         CTTTCCC     71     57        764         764            1.270                         11931                 11932                 11933                 11934                11935                11936                11937                
374         TTTTCCC     33     15        764         764            2.250                         11931                 11932                 11933                 11934                11935                11936                11937                
374         TGCTCCC     8      2         764         764            4.030                         11931                 11932                 11933                 11934                11935                11936                11937                
374         TTTTCCCTA   33     15        764         764            2.250   11931                 11932                 11933                 11934                 11935                11936                11937                11938                11939                
374         TGCCCCCTA   25     42        764         764            0.580   11931                 11932                 11933                 11934                 11935                11936                11937                11938                11939                
374         CTTTCCCTA   70     57        764         764            1.250   11931                 11932                 11933                 11934                 11935                11936                11937                11938                11939                
374         TGCTCCCTA   8      2         764         764            4.030   11931                 11932                 11933                 11934                 11935                11936                11937                11938                11939                
374         GCTCCCTAG   8      2         764         764            4.030   11932                 11933                 11934                 11935                 11936                11937                11938                11939                11940                
374         TTTCCCTAG   103    72        764         764            1.500   11932                 11933                 11934                 11935                 11936                11937                11938                11939                11940                
374         GCCCCCTAG   29     42        764         764            0.680   11932                 11933                 11934                 11935                 11936                11937                11938                11939                11940                
374         TTCCCTAGC   103    72        764         764            1.500   11933                 11934                 11935                 11936                 11937                11938                11939                11940                11941                
374         CCCCCTAGC   29     42        764         764            0.680   11933                 11934                 11935                 11936                 11937                11938                11939                11940                11941                
374         CTCCCTAGC   8      2         764         764            4.030   11933                 11934                 11935                 11936                 11937                11938                11939                11940                11941                
374         CCCCTAGCT   30     42        764         764            0.700   11934                 11935                 11936                 11937                 11938                11939                11940                11941                11942                
374         TCCCTAGCT   111    74        764         764            1.580   11934                 11935                 11936                 11937                 11938                11939                11940                11941                11942                
374         TTAAT       504    531       764         764            0.850                                               11937                 11938                 11939                11940                11941                
374         CTAGC       141    116       764         764            1.260                                               11937                 11938                 11939                11940                11941                
374         G           148    116       764         764            1.340                                                                                           11940                
374         A           616    648       764         764            0.750                                                                                           11940                
374         GCT         148    116       764         764            1.340                                                                     11940                 11941                11942                
374         ATC         616    648       764         764            0.750                                                                     11940                 11941                11942                
374         GCTTC       121    87        764         764            1.460                                               11940                 11941                 11942                11943                11944                
374         GCTGC       9      19        764         764            0.470                                               11940                 11941                 11942                11943                11944                
374         GCTGT       17     10        764         764            1.720                                               11940                 11941                 11942                11943                11944                
374         ATCTT       20     28        764         764            0.710                                               11940                 11941                 11942                11943                11944                
374         ATCGT       428    456       764         764            0.860                                               11940                 11941                 11942                11943                11944                
374         CTT         20     28        764         764            0.710                                                                     11942                 11943                11944                
374         CGT         430    456       764         764            0.870                                                                     11942                 11943                11944                
374         TTC         123    87        764         764            1.490                                                                     11942                 11943                11944                
374         TGC         9      19        764         764            0.470                                                                     11942                 11943                11944                
375         G           222    190       764         764            1.240                                                                                           12099                
375         A           540    574       764         764            0.810                                                                                           12099                
375         C           519    561       764         764            0.770                                                                                           12100                
375         T           243    203       764         764            1.290                                                                                           12100                
375         T           76     61        764         764            1.280                                                                                           12103                
375         C           686    703       764         764            0.780                                                                                           12103                
375         C           282    347       764         764            0.710                                                                                           12104                
375         A           480    417       764         764            1.420                                                                                           12104                
375         C           271    326       764         764            0.740                                                                                           12108                
375         T           491    438       764         764            1.350                                                                                           12108                
375         G           497    531       764         764            0.820                                                                                           12109                
375         T           265    233       764         764            1.220                                                                                           12109                
375         G           545    479       764         764            1.490                                                                                           12110                
375         A           217    285       764         764            0.670                                                                                           12110                
375         G           546    571       764         764            0.850                                                                                           12111                
375         T           216    193       764         764            1.170                                                                                           12111                
376         GTTGCGTCG   13     6         764         764            2.190   12664                 12665                 12666                 12667                 12668                12669                12670                12671                12672                
376         GTTGCATCA   89     124       764         764            0.680   12664                 12665                 12666                 12667                 12668                12669                12670                12671                12672                
376         GTTGCATAA   14     4         764         764            3.550   12664                 12665                 12666                 12667                 12668                12669                12670                12671                12672                
376         GCCAAATCG   154    132       764         764            1.210   12664                 12665                 12666                 12667                 12668                12669                12670                12671                12672                
376         ATTGCATAA   98     73        764         764            1.390   12664                 12665                 12666                 12667                 12668                12669                12670                12671                12672                
376         GCCAAATCA   81     98        764         764            0.810   12664                 12665                 12666                 12667                 12668                12669                12670                12671                12672                
376         GCATC       100    143       764         764            0.650                                               12667                 12668                 12669                12670                12671                
376         GCATA       120    81        764         764            1.570                                               12667                 12668                 12669                12670                12671                
376         CATAA       118    79        764         764            1.580                                               12668                 12669                 12670                12671                12672                
376         AATCG       166    144       764         764            1.200                                               12668                 12669                 12670                12671                12672                
376         CATCA       93     135       764         764            0.650                                               12668                 12669                 12670                12671                12672                
376         CGTCG       11     5         764         764            2.220                                               12668                 12669                 12670                12671                12672                
376         AATCA       141    161       764         764            0.850                                               12668                 12669                 12670                12671                12672                
376         A           175    129       764         764            1.460                                                                                           12671                
376         C           589    635       764         764            0.680                                                                                           12671                
376         CATCATACA   67     105       764         764            0.600   12668                 12669                 12670                 12671                 12672                12673                12674                12675                12676                
376         CATAACATA   118    81        764         764            1.540   12668                 12669                 12670                 12671                 12672                12673                12674                12675                12676                
376         CGTCGTGCA   11     5         764         764            2.220   12668                 12669                 12670                 12671                 12672                12673                12674                12675                12676                
376         CGTCATGCA   19     28        764         764            0.670   12668                 12669                 12670                 12671                 12672                12673                12674                12675                12676                
376         AATCGTGCA   168    143       764         764            1.220   12668                 12669                 12670                 12671                 12672                12673                12674                12675                12676                
376         AATCATGCG   78     102       764         764            0.740   12668                 12669                 12670                 12671                 12672                12673                12674                12675                12676                
376         CATGC       183    210       764         764            0.830                                               12671                 12672                 12673                12674                12675                
376         CGTGC       185    160       764         764            1.210                                               12671                 12672                 12673                12674                12675                
376         CATAC       105    142       764         764            0.700                                               12671                 12672                 12673                12674                12675                
376         AACAT       174    127       764         764            1.480                                               12671                 12672                 12673                12674                12675                
376         ATGCG       93     122       764         764            0.730                                               12672                 12673                 12674                12675                12676                
376         GTGCA       186    161       764         764            1.210                                               12672                 12673                 12674                12675                12676                
376         ACATA       213    170       764         764            1.350                                               12672                 12673                 12674                12675                12676                
376         ATACA       104    142       764         764            0.690                                               12672                 12673                 12674                12675                12676                
376         TACAG       104    142       764         764            0.690                                               12673                 12674                 12675                12676                12677                
376         CATAA       190    147       764         764            1.390                                               12673                 12674                 12675                12676                12677                
376         TGCGG       93     122       764         764            0.730                                               12673                 12674                 12675                12676                12677                
376         TGCAG       276    250       764         764            1.160                                               12673                 12674                 12675                12676                12677                
376         GCAGT       22     34        764         764            0.640                                               12674                 12675                 12676                12677                12678                
376         ATAAC       190    147       764         764            1.390                                               12674                 12675                 12676                12677                12678                
376         GCAGC       329    291       764         764            1.230                                               12674                 12675                 12676                12677                12678                
376         GCGGC       94     121       764         764            0.750                                               12674                 12675                 12676                12677                12678                
376         ACAGT       102    144       764         764            0.660                                               12674                 12675                 12676                12677                12678                
376         CAGCA       185    159       764         764            1.220                                               12675                 12676                 12677                12678                12679                
376         CAGTG       124    178       764         764            0.640                                               12675                 12676                 12677                12678                12679                
376         CGGCA       93     122       764         764            0.730                                               12675                 12676                 12677                12678                12679                
376         TAACG       189    146       764         764            1.390                                               12675                 12676                 12677                12678                12679                
376         AGCGG       41     29        764         764            1.440                                               12676                 12677                 12678                12679                12680                
376         AGTGA       124    177       764         764            0.640                                               12676                 12677                 12678                12679                12680                
376         AACGA       178    134       764         764            1.430                                               12676                 12677                 12678                12679                12680                
376         GGCAA       94     122       764         764            0.740                                               12676                 12677                 12678                12679                12680                
376         AGCAA       183    160       764         764            1.190                                               12676                 12677                 12678                12679                12680                
376         CGA         307    262       764         764            1.290                                                                     12678                 12679                12680                
376         CGG         53     41        764         764            1.310                                                                     12678                 12679                12680                
376         TGA         124    179       764         764            0.630                                                                     12678                 12679                12680                
376         AGCAATGTC   134    108       764         764            1.290   12676                 12677                 12678                 12679                 12680                12681                12682                12683                12684                
376         AGCGGTATC   41     29        764         764            1.440   12676                 12677                 12678                 12679                 12680                12681                12682                12683                12684                
376         AGTGATGTC   86     117       764         764            0.700   12676                 12677                 12678                 12679                 12680                12681                12682                12683                12684                
376         GGCAATGTT   88     117       764         764            0.720   12676                 12677                 12678                 12679                 12680                12681                12682                12683                12684                
376         AGTGATATC   38     60        764         764            0.610   12676                 12677                 12678                 12679                 12680                12681                12682                12683                12684                
376         AACGATGTC   10     4         764         764            2.520   12676                 12677                 12678                 12679                 12680                12681                12682                12683                12684                
376         AACGATATC   92     65        764         764            1.470   12676                 12677                 12678                 12679                 12680                12681                12682                12683                12684                
376         CAATGTC     137    109       764         764            1.310                         12678                 12679                 12680                 12681                12682                12683                12684                
376         TGATATC     38     59        764         764            0.630                         12678                 12679                 12680                 12681                12682                12683                12684                
376         CAATGTT     88     118       764         764            0.710                         12678                 12679                 12680                 12681                12682                12683                12684                
376         CGGTATC     52     41        764         764            1.290                         12678                 12679                 12680                 12681                12682                12683                12684                
376         TGATGTC     86     120       764         764            0.680                         12678                 12679                 12680                 12681                12682                12683                12684                
376         CGATATC     108    80        764         764            1.410                         12678                 12679                 12680                 12681                12682                12683                12684                
376         CGAGGTCTC   9      17        764         764            0.520   12678                 12679                 12680                 12681                 12682                12683                12684                12686                12687                
376         CGATATCTC   112    82        764         764            1.430   12678                 12679                 12680                 12681                 12682                12683                12684                12686                12687                
376         TGATGTCCT   83     116       764         764            0.680   12678                 12679                 12680                 12681                 12682                12683                12684                12686                12687                
376         CAATGTTTC   89     115       764         764            0.740   12678                 12679                 12680                 12681                 12682                12683                12684                12686                12687                
376         TGATATCTC   38     59        764         764            0.630   12678                 12679                 12680                 12681                 12682                12683                12684                12686                12687                
376         CAATGTCTC   116    87        764         764            1.390   12678                 12679                 12680                 12681                 12682                12683                12684                12686                12687                
376         ATGTCCT     87     123       764         764            0.670                         12680                 12681                 12682                 12683                12684                12686                12687                
376         AGGTCTC     9      17        764         764            0.520                         12680                 12681                 12682                 12683                12684                12686                12687                
376         ATGTCTC     161    129       764         764            1.310                         12680                 12681                 12682                 12683                12684                12686                12687                
376         ATGTTTC     91     115       764         764            0.760                         12680                 12681                 12682                 12683                12684                12686                12687                
376         TCT         544    487       764         764            1.410                                                                     12683                 12684                12686                
376         TCC         91     122       764         764            0.710                                                                     12683                 12684                12686                
376         TTT         92     120       764         764            0.730                                                                     12683                 12684                12686                
376         TGTCTCTTA   108    81        764         764            1.390   12681                 12682                 12683                 12684                 12686                12687                12688                12689                12690                
376         GGTCTCTCA   8      17        764         764            0.460   12681                 12682                 12683                 12684                 12686                12687                12688                12689                12690                
376         TGTTTCTTA   92     114       764         764            0.780   12681                 12682                 12683                 12684                 12686                12687                12688                12689                12690                
376         TATCTCTCA   251    229       764         764            1.140   12681                 12682                 12683                 12684                 12686                12687                12688                12689                12690                
376         TGTCCTCCG   51     76        764         764            0.650   12681                 12682                 12683                 12684                 12686                12687                12688                12689                12690                
376         CCTCC       52     77        764         764            0.650                                               12684                 12686                 12687                12688                12689                
376         CTCTT       109    80        764         764            1.420                                               12684                 12686                 12687                12688                12689                
376         TTCTT       92     118       764         764            0.750                                               12684                 12686                 12687                12688                12689                
376         CTCTTAC     109    82        764         764            1.380                         12684                 12686                 12687                 12688                12689                12690                12691                
376         CCTCCGC     52     73        764         764            0.690                         12684                 12686                 12687                 12688                12689                12690                12691                
376         TTCTTAC     92     118       764         764            0.750                         12684                 12686                 12687                 12688                12689                12690                12691                
376         TTCTTACAG   91     116       764         764            0.760   12684                 12686                 12687                 12688                 12689                12690                12691                12692                12693                
376         CTCTTACAG   107    81        764         764            1.370   12684                 12686                 12687                 12688                 12689                12690                12691                12692                12693                
376         CCTCCGCGA   50     71        764         764            0.680   12684                 12686                 12687                 12688                 12689                12690                12691                12692                12693                
377         G           552    530       764         764            1.150                                                                                           13073                
377         T           212    234       764         764            0.870                                                                                           13073                
377         C           618    586       764         764            1.290                                                                                           13074                
377         T           146    178       764         764            0.780                                                                                           13074                
377         T           146    177       764         764            0.780                                                                                           13075                
377         C           618    587       764         764            1.280                                                                                           13075                
377         C           253    230       764         764            1.150                                                                                           13076                
377         T           511    534       764         764            0.870                                                                                           13076                
377         A           567    592       764         764            0.840                                                                                           13078                
377         C           197    172       764         764            1.200                                                                                           13078                
377         A           105    149       764         764            0.660                                                                                           13081                
377         C           659    615       764         764            1.520                                                                                           13081                
377         A           565    521       764         764            1.320                                                                                           13082                
377         C           199    243       764         764            0.760                                                                                           13082                
377         C           653    603       764         764            1.570                                                                                           13084                
377         T           111    161       764         764            0.640                                                                                           13084                
377         C           611    545       764         764            1.600                                                                                           13085                
377         A           153    219       764         764            0.620                                                                                           13085                
377         T           214    267       764         764            0.720                                                                                           13088                
377         C           550    497       764         764            1.380                                                                                           13088                
377         T           610    542       764         764            1.620                                                                                           13089                
377         C           154    222       764         764            0.620                                                                                           13089                
377         C           548    494       764         764            1.390                                                                                           13090                
377         T           216    270       764         764            0.720                                                                                           13090                
377         C           132    157       764         764            0.810                                                                                           13095                
377         A           632    607       764         764            1.240                                                                                           13095                
377         C           131    157       764         764            0.800                                                                                           13099                
377         T           633    607       764         764            1.250                                                                                           13099                
378         C           79     57        764         764            1.430                                                                                           13239                
378         T           685    707       764         764            0.700                                                                                           13239                
378         TAC         479    444       764         764            1.210                                                                     13239                 13240                13241                
378         CAC         78     57        764         764            1.410                                                                     13239                 13240                13241                
378         TAT         120    166       764         764            0.670                                                                     13239                 13240                13241                
378         TATCT       121    166       764         764            0.680                                               13239                 13240                 13241                13242                13243                
378         CACTC       78     57        764         764            1.410                                               13239                 13240                 13241                13242                13243                
378         TACCT       441    391       764         764            1.300                                               13239                 13240                 13241                13242                13243                
378         TACCC       36     53        764         764            0.660                                               13239                 13240                 13241                13242                13243                
378         ACTCG       79     57        764         764            1.430                                               13240                 13241                 13242                13243                13244                
378         ACCCT       35     53        764         764            0.640                                               13240                 13241                 13242                13243                13244                
378         ACCTG       442    391       764         764            1.310                                               13240                 13241                 13242                13243                13244                
378         ATCTG       120    166       764         764            0.670                                               13240                 13241                 13242                13243                13244                
378         TCTGC       120    166       764         764            0.670                                               13241                 13242                 13243                13244                13245                
378         CCCTT       35     53        764         764            0.640                                               13241                 13242                 13243                13244                13245                
378         CTCGT       83     60        764         764            1.430                                               13241                 13242                 13243                13244                13245                
378         CCTGC       442    393       764         764            1.300                                               13241                 13242                 13243                13244                13245                
378         TCTGCCG     120    166       764         764            0.670                         13241                 13242                 13243                 13244                13245                13246                13247                
378         CTCGTAG     83     60        764         764            1.430                         13241                 13242                 13243                 13244                13245                13246                13247                
378         CCCTTCG     35     53        764         764            0.640                         13241                 13242                 13243                 13244                13245                13246                13247                
378         CCTGCCA     432    385       764         764            1.280                         13241                 13242                 13243                 13244                13245                13246                13247                
378         CCTGCCATC   432    385       764         764            1.280   13241                 13242                 13243                 13244                 13245                13246                13247                13248                13249                
378         CTCGTAGTA   83     60        764         764            1.430   13241                 13242                 13243                 13244                 13245                13246                13247                13248                13249                
378         TCTGCCGGC   120    166       764         764            0.670   13241                 13242                 13243                 13244                 13245                13246                13247                13248                13249                
378         CCCTTCGTC   35     53        764         764            0.640   13241                 13242                 13243                 13244                 13245                13246                13247                13248                13249                
378         CTGCCGGCC   120    167       764         764            0.670   13242                 13243                 13244                 13245                 13246                13247                13248                13249                13250                
378         TCGTAGTAT   83     60        764         764            1.430   13242                 13243                 13244                 13245                 13246                13247                13248                13249                13250                
378         CTGCCATCT   11     4         764         764            2.780   13242                 13243                 13244                 13245                 13246                13247                13248                13249                13250                
378         CTGCCATCC   421    381       764         764            1.230   13242                 13243                 13244                 13245                 13246                13247                13248                13249                13250                
378         CCTTCGTCT   36     53        764         764            0.660   13242                 13243                 13244                 13245                 13246                13247                13248                13249                13250                
378         TGCCGGCCT   120    164       764         764            0.680   13243                 13244                 13245                 13246                 13247                13248                13249                13250                13251                
378         CGTAGTATT   85     60        764         764            1.470   13243                 13244                 13245                 13246                 13247                13248                13249                13250                13251                
378         TGCCATCTT   11     4         764         764            2.780   13243                 13244                 13245                 13246                 13247                13248                13249                13250                13251                
378         TGCCATCCT   85     57        764         764            1.550   13243                 13244                 13245                 13246                 13247                13248                13249                13250                13251                
378         CTTCGTCTT   36     53        764         764            0.660   13243                 13244                 13245                 13246                 13247                13248                13249                13250                13251                
378         GCCATCTTC   11     4         764         764            2.780   13244                 13245                 13246                 13247                 13248                13249                13250                13251                13252                
378         TTCGTCTTC   36     52        764         764            0.680   13244                 13245                 13246                 13247                 13248                13249                13250                13251                13252                
378         GCCATCCTC   85     57        764         764            1.550   13244                 13245                 13246                 13247                 13248                13249                13250                13251                13252                
378         GTAGTATTT   86     60        764         764            1.490   13244                 13245                 13246                 13247                 13248                13249                13250                13251                13252                
378         GCCGGCCTC   120    165       764         764            0.680   13244                 13245                 13246                 13247                 13248                13249                13250                13251                13252                
378         ATCTT       11     4         764         764            2.780                                               13247                 13248                 13249                13250                13251                
378         GTCTT       36     52        764         764            0.680                                               13247                 13248                 13249                13250                13251                
378         GTATT       87     60        764         764            1.510                                               13247                 13248                 13249                13250                13251                
378         ATCCT       85     57        764         764            1.550                                               13247                 13248                 13249                13250                13251                
378         GGCCT       199    257       764         764            0.690                                               13247                 13248                 13249                13250                13251                
378         TATTT       86     60        764         764            1.490                                               13248                 13249                 13250                13251                13252                
378         TCCTC       85     57        764         764            1.550                                               13248                 13249                 13250                13251                13252                
378         GCCTC       199    257       764         764            0.690                                               13248                 13249                 13250                13251                13252                
378         ATCCTCTGA   73     49        764         764            1.540   13247                 13248                 13249                 13250                 13251                13252                13253                13254                13255                
378         GTATTTTAA   84     59        764         764            1.480   13247                 13248                 13249                 13250                 13251                13252                13253                13254                13255                
378         GGCCTCGAA   114    156       764         764            0.680   13247                 13248                 13249                 13250                 13251                13252                13253                13254                13255                
378         ATCTTCGAG   11     4         764         764            2.780   13247                 13248                 13249                 13250                 13251                13252                13253                13254                13255                
378         GTCTTCGAG   35     52        764         764            0.660   13247                 13248                 13249                 13250                 13251                13252                13253                13254                13255                
378         CTCGA       120    166       764         764            0.670                                               13250                 13251                 13252                13253                13254                
378         CTCTG       73     49        764         764            1.540                                               13250                 13251                 13252                13253                13254                
378         TTTTA       84     59        764         764            1.480                                               13250                 13251                 13252                13253                13254                
378         TCGAG       52     67        764         764            0.760                                               13251                 13252                 13253                13254                13255                
378         TTTAA       84     59        764         764            1.480                                               13251                 13252                 13253                13254                13255                
378         TCGAA       115    155       764         764            0.700                                               13251                 13252                 13253                13254                13255                
378         TCTGA       73     49        764         764            1.540                                               13251                 13252                 13253                13254                13255                
378         TTTTAACGG   83     59        764         764            1.460   13250                 13251                 13252                 13253                 13254                13255                13256                13257                13258                
378         CTCTGACGG   72     47        764         764            1.590   13250                 13251                 13252                 13253                 13254                13255                13256                13257                13258                
378         CTCGAACGA   111    150       764         764            0.700   13250                 13251                 13252                 13253                 13254                13255                13256                13257                13258                
378         CCCGAACGG   115    96        764         764            1.230   13250                 13251                 13252                 13253                 13254                13255                13256                13257                13258                
378         TTTAACGGG   83     59        764         764            1.460   13251                 13252                 13253                 13254                 13255                13256                13257                13258                13259                
378         CCGAACGGG   115    96        764         764            1.230   13251                 13252                 13253                 13254                 13255                13256                13257                13258                13259                
378         TCGAGCGGA   44     57        764         764            0.760   13251                 13252                 13253                 13254                 13255                13256                13257                13258                13259                
378         TCTGACGGG   72     47        764         764            1.590   13251                 13252                 13253                 13254                 13255                13256                13257                13258                13259                
378         TCGAACGAG   111    150       764         764            0.700   13251                 13252                 13253                 13254                 13255                13256                13257                13258                13259                
378         CGAACGAGG   123    168       764         764            0.680   13252                 13253                 13254                 13255                 13256                13257                13258                13259                13260                
378         TTAACGGGA   83     59        764         764            1.460   13252                 13253                 13254                 13255                 13256                13257                13258                13259                13260                
378         CGAGCGGAA   44     57        764         764            0.760   13252                 13253                 13254                 13255                 13256                13257                13258                13259                13260                
378         CGAACGGGG   116    96        764         764            1.250   13252                 13253                 13254                 13255                 13256                13257                13258                13259                13260                
378         GAGCGGAAC   44     57        764         764            0.760   13253                 13254                 13255                 13256                 13257                13258                13259                13260                13261                
378         TAACGGGAC   84     59        764         764            1.480   13253                 13254                 13255                 13256                 13257                13258                13259                13260                13261                
378         GAACGGGGT   116    96        764         764            1.250   13253                 13254                 13255                 13256                 13257                13258                13259                13260                13261                
378         GAACGAGGC   6      18        764         764            0.330   13253                 13254                 13255                 13256                 13257                13258                13259                13260                13261                
378         GAACGAGGT   119    150       764         764            0.760   13253                 13254                 13255                 13256                 13257                13258                13259                13260                13261                
378         CGAGG       132    178       764         764            0.690                                               13256                 13257                 13258                13259                13260                
378         CGGAA       49     65        764         764            0.740                                               13256                 13257                 13258                13259                13260                
378         CGGGG       406    362       764         764            1.260                                               13256                 13257                 13258                13259                13260                
378         CGGGA       84     60        764         764            1.450                                               13256                 13257                 13258                13259                13260                
378         ACGAGGCGC   4      18        764         764            0.220   13255                 13256                 13257                 13258                 13259                13260                13261                13262                13263                
378         ACGGGGCGT   288    265       764         764            1.140   13255                 13256                 13257                 13258                 13259                13260                13261                13262                13263                
378         ACGGGACAT   82     59        764         764            1.440   13255                 13256                 13257                 13258                 13259                13260                13261                13262                13263                
378         ACGAGGTAT   34     48        764         764            0.690   13255                 13256                 13257                 13258                 13259                13260                13261                13262                13263                
378         GCGGAACAT   44     56        764         764            0.770   13255                 13256                 13257                 13258                 13259                13260                13261                13262                13263                
378         ACGGGGTGT   116    96        764         764            1.250   13255                 13256                 13257                 13258                 13259                13260                13261                13262                13263                
378         ACGAGGTGC   80     100       764         764            0.780   13255                 13256                 13257                 13258                 13259                13260                13261                13262                13263                
378         GGGACAT     83     60        764         764            1.430                         13257                 13258                 13259                 13260                13261                13262                13263                
378         GAGGCGC     3      12        764         764            0.250                         13257                 13258                 13259                 13260                13261                13262                13263                
378         GGGGTGT     115    92        764         764            1.290                         13257                 13258                 13259                 13260                13261                13262                13263                
378         GAGGTGC     80     105       764         764            0.730                         13257                 13258                 13259                 13260                13261                13262                13263                
378         GGAACAT     48     64        764         764            0.730                         13257                 13258                 13259                 13260                13261                13262                13263                
378         GAGGTAT     34     48        764         764            0.690                         13257                 13258                 13259                 13260                13261                13262                13263                
378         GGGGCGTCC   75     46        764         764            1.700   13257                 13258                 13259                 13260                 13261                13262                13263                13264                13265                
378         GAGGTGCTT   78     98        764         764            0.770   13257                 13258                 13259                 13260                 13261                13262                13263                13264                13265                
378         GAGGTATTT   34     48        764         764            0.690   13257                 13258                 13259                 13260                 13261                13262                13263                13264                13265                
378         GAGGCGCTT   4      18        764         764            0.220   13257                 13258                 13259                 13260                 13261                13262                13263                13264                13265                
378         GGGGTGTCT   117    98        764         764            1.230   13257                 13258                 13259                 13260                 13261                13262                13263                13264                13265                
378         GGGACATTT   83     60        764         764            1.430   13257                 13258                 13259                 13260                 13261                13262                13263                13264                13265                
378         GGAACATTT   48     64        764         764            0.730   13257                 13258                 13259                 13260                 13261                13262                13263                13264                13265                
378         GGCGTCC     75     46        764         764            1.700                         13259                 13260                 13261                 13262                13263                13264                13265                
378         GGTGCTT     79     101       764         764            0.760                         13259                 13260                 13261                 13262                13263                13264                13265                
378         GACATTT     84     61        764         764            1.420                         13259                 13260                 13261                 13262                13263                13264                13265                
378         AACATTT     48     64        764         764            0.730                         13259                 13260                 13261                 13262                13263                13264                13265                
378         GGTATTT     34     46        764         764            0.730                         13259                 13260                 13261                 13262                13263                13264                13265                
378         GGTGTCT     116    97        764         764            1.230                         13259                 13260                 13261                 13262                13263                13264                13265                
378         GGCGCTT     4      15        764         764            0.260                         13259                 13260                 13261                 13262                13263                13264                13265                
378         CGTCC       75     46        764         764            1.700                                               13261                 13262                 13263                13264                13265                
378         CGCTT       5      16        764         764            0.310                                               13261                 13262                 13263                13264                13265                
378         TATTT       34     47        764         764            0.710                                               13261                 13262                 13263                13264                13265                
378         TGCTT       78     100       764         764            0.750                                               13261                 13262                 13263                13264                13265                
378         TACTT       7      3         764         764            2.350                                               13261                 13262                 13263                13264                13265                
378         TGTCT       118    97        764         764            1.260                                               13261                 13262                 13263                13264                13265                
378         GTCCT       74     46        764         764            1.670                                               13262                 13263                 13264                13265                13266                
378         ATTTC       113    134       764         764            0.820                                               13262                 13263                 13264                13265                13266                
378         GCTTC       6      18        764         764            0.330                                               13262                 13263                 13264                13265                13266                
378         GCTTT       77     98        764         764            0.760                                               13262                 13263                 13264                13265                13266                
378         ATTTT       53     38        764         764            1.420                                               13262                 13263                 13264                13265                13266                
378         T           689    716       764         764            0.620                                                                                           13265                
378         C           75     48        764         764            1.620                                                                                           13265                
378         ATTTCCTGC   34     47        764         764            0.710   13262                 13263                 13264                 13265                 13266                13267                13268                13269                13270                
378         GCTTTCTGC   41     56        764         764            0.720   13262                 13263                 13264                 13265                 13266                13267                13268                13269                13270                
378         GTCCTCTAT   73     45        764         764            1.690   13262                 13263                 13264                 13265                 13266                13267                13268                13269                13270                
378         GCTTCCCGC   4      14        764         764            0.280   13262                 13263                 13264                 13265                 13266                13267                13268                13269                13270                
378         ACTTCCTGC   7      3         764         764            2.350   13262                 13263                 13264                 13265                 13266                13267                13268                13269                13270                
378         TTTCCTGCT   27     39        764         764            0.680   13263                 13264                 13265                 13266                 13267                13268                13269                13270                13271                
378         TCCTCTATC   48     36        764         764            1.360   13263                 13264                 13265                 13266                 13267                13268                13269                13270                13271                
378         TCTCCTGCT   147    128       764         764            1.180   13263                 13264                 13265                 13266                 13267                13268                13269                13270                13271                
378         CTTTCTGCT   44     62        764         764            0.690   13263                 13264                 13265                 13266                 13267                13268                13269                13270                13271                
378         TCCTCTATT   25     10        764         764            2.550   13263                 13264                 13265                 13266                 13267                13268                13269                13270                13271                
378         CTTCCCGCT   4      15        764         764            0.260   13263                 13264                 13265                 13266                 13267                13268                13269                13270                13271                
378         TTTTCCGCT   50     39        764         764            1.300   13263                 13264                 13265                 13266                 13267                13268                13269                13270                13271                
