Supplementary Table 11:
 										
List of genes common or specific to FLU (Influenza A) and/or SLE (Lupus) groups (Data shown Figure 6)										
										
PROBE ID			DESCRIPTION								
										
OVER-EXPRESSED: 
P<0.01 SLE 
& FLU - IFN	uniGeneID
									
219519_s_at	Hs.31869	sialoadhesin
								
217933_s_at	Hs.479264	leucine aminopeptidase 3
								
205569_at	Hs.518448	"synonyms: LAMP, DCLAMP, TSC403, DC-LAMP; go_component: lysosomal membrane [goid 0005765] [evidence TAS] [pmid 9721848]; go_process: oncogenesis [goid 0007048] [evidence TAS] [pmid 9721848]; 						go_process: cell proliferation [goid 0008283] [evidence TAS] [pmid 9721848]; Homo sapiens lysosomal-associated membrane protein 3 (LAMP3), mRNA."
							
222036_s_at	Hs.460184	MCM4 minichromosome maintenance deficient 4 (S. cerevisiae)
								
217165_x_at	Hs.513626	human metallothionein-If; Human metallothionein-If gene (hMT-If).
								
212185_x_at	Hs.418241	metallothionein 2A	
							
205660_at	Hs.118633	2'-5'-oligoadenylate synthetase-like
								
204747_at	Hs.47338	interferon-induced protein with tetratricopeptide repeats 4
								
214453_s_at	Hs.82316	interferon-induced protein 44	
							
213294_at	Hs.546523	hypothetical protein FLJ38348							

204972_at	Hs.584785	"2'-5'-oligoadenylate synthetase 2, 69/71kDa"								

205483_s_at	Hs.458485	"interferon, alpha-inducible protein (clone IFI-15K)"								

219607_s_at	Hs.325960	"membrane-spanning 4-domains, subfamily A, member 4"								

212262_at	Hs.510324	"quaking homolog, KH domain RNA binding (mouse)"								

219211_at	Hs.38260	ubiquitin specific protease 18								

202086_at	Hs.517307	"myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)"								

204439_at	Hs.389724	chromosome 1 open reading frame 29								

218400_at	Hs.528634	"2'-5'-oligoadenylate synthetase 3, 100kDa"								

212099_at	Hs.502876	"ras homolog gene family, member B"								

218115_at	Hs.26516	ASF1 anti-silencing function 1 homolog B (S. cerevisiae)								

219863_at	Hs.26663	cyclin-E binding protein 1								

204415_at	Hs.523847	"interferon, alpha-inducible protein (clone IFI-6-16)"							

205552_s_at	Hs.524760	"2',5'-oligoadenylate synthetase 1, 40/46kDa"								

203595_s_at	Hs.252839	interferon-induced protein with tetratricopeptide repeats 5								

203236_s_at	Hs.81337	"lectin, galactoside-binding, soluble, 9 (galectin 9)"								

204170_s_at	Hs.83758	CDC28 protein kinase regulatory subunit 2								

222154_s_at	Hs.120323	DNA polymerase-transactivated protein 6								

220947_s_at	Hs.513498	DKFZP434P1750 protein								

203153_at	Hs.20315	interferon-induced protein with tetratricopeptide repeats 1								

202145_at	Hs.521903	"lymphocyte antigen 6 complex, locus E"								

207668_x_at	Hs.212102	protein disulfide isomerase-related protein								

44673_at	Hs.31869	sialoadhesin								

202107_s_at	Hs.477481	"MCM2 minichromosome maintenance deficient 2, mitotin (S. cerevisiae)"							

204211_x_at	Hs.131431	"protein kinase, interferon-inducible double stranded RNA dependent"								

208912_s_at	Hs.273621	"2',3'-cyclic nucleotide 3' phosphodiesterase"							

203342_at	Hs.30570	translocase of inner mitochondrial membrane 17 homolog B (yeast)		

202863_at	Hs.369056	nuclear antigen Sp100							

204994_at	Hs.926		myxovirus (influenza virus) resistance 2 (mouse)								

201890_at	Hs.226390	ribonucleotide reductase M2 polypeptide								

203744_at	Hs.19114	high-mobility group box 3								

218520_at	Hs.505874	TANK-binding kinase 1								

206491_s_at	Hs.126938	"N-ethylmaleimide-sensitive factor attachment protein, alpha"								

208676_s_at	Hs.524498	"proliferation-associated 2G4, 38kDa"								

204805_s_at	Hs.75307	"H1 histone family, member X"								

212203_x_at	Hs.374650	interferon induced transmembrane protein 3 (1-8U)								

200766_at	Hs.546248	cathepsin D (lysosomal aspartyl protease)								

200808_s_at	Hs.490415	zyxin								

202589_at	Hs.369762	thymidylate synthetase								

204858_s_at	Hs.546251	endothelial cell growth factor 1 (platelet-derived)								

38710_at	Hs.473788	ubiquitin-specific protease otubain 1								

214315_x_at	Hs.515162	calreticulin								

201119_s_at	Hs.433901	cytochrome c oxidase subunit VIII								

203254_s_at	Hs.375001	talin 1							

37965_at	Hs.475074	"parvin, beta"								

200948_at	Hs.524214	myeloid leukemia factor 2								

200649_at	Hs.515524	nucleobindin 1								

										
										
OVER-EXPRESSED: 
P<0.01 SLE; 
P>0.5 FLU - C1	
									
218935_at	Hs.368808	EH-domain containing 3								

200931_s_at	Hs.500101	vinculin								

211634_x_at	Hs.538461	"Homo sapiens partial mRNA for immunoglobulin heavy chain variable region (IGHV gene), isolate B-CLL G026"								

216401_x_at	Hs.429466 /// 	"Homo sapiens partial IGKV gene for immunoglobulin kappa chain variable region, clone 38."
		Hs.449621 /// 
		Hs.516184 /// 
		Hs.551722									

216576_x_at	Hs.552522	"Homo sapiens clone H10 anti-HLA-A2/A28 immunoglobulin light chain variable region mRNA, partial cds"								

201412_at	Hs.525232	low density lipoprotein receptor-related protein 10								

200634_at	Hs.494691	profilin 1								

213241_at	Hs.584845	plexin C1								

220496_at	Hs.409794	C-type lectin-like receptor-2								

202030_at	Hs.513520	branched chain alpha-ketoacid dehydrogenase kinase								

205936_s_at	Hs.411695	hexokinase 3 (white cell)								

217853_at	Hs.520814	tensin-like SH2 domain-containing 1								

209765_at	Hs.483944	a disintegrin and metalloproteinase domain 19 (meltrin beta)								

201186_at	Hs.533136	low density lipoprotein receptor-related protein associated protein 1								

204613_at	Hs.413111	"phospholipase C, gamma 2 (phosphatidylinositol-specific)"								

220964_s_at	Hs.300816	"RAB1B, member RAS oncogene family"								

211644_x_at	Hs.449621	"Homo sapiens immunoglobulin kappa light chain mRNA, partial cds"								

201301_s_at	Hs.422986	annexin A4								

201403_s_at	Hs.191734	microsomal glutathione S-transferase 3								

201903_at	Hs.119251	ubiquinol-cytochrome c reductase core protein I								

218482_at	Hs.492555	DC6 protein								

215379_x_at	Hs.449585	immunoglobulin lambda joining 3								

200055_at	Hs.584805	"TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa"								

202325_s_at	Hs.246310	"ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F6"								

35820_at	Hs.483873									

213113_s_at	Hs.99962	likely ortholog of mouse embryonic epithelial gene 1								

201302_at	Hs.422986	annexin A4								

218026_at	Hs.16059	HSPC009 protein								

207157_s_at	Hs.513557	"guanine nucleotide binding protein (G protein), gamma 5"								

203155_at	Hs.516278	"SET domain, bifurcated 1"								

208829_at	Hs.370937	TAP binding protein (tapasin)								

203880_at	Hs.534383	popeye domain containing 2								

205469_s_at	Hs.521181	interferon regulatory factor 5								

201234_at	Hs.5158		integrin-linked kinase								

216323_x_at	Hs.503749	"alpha-tubulin isotype H2-alpha; Human alpha-tubulin isotype H2-alpha gene, last exon."								

213011_s_at	Hs.524219	"7n79g04.x1 NCI_CGAP_Ov18 Homo sapiens cDNA clone IMAGE:3570991 3' similar to SW:TPIS_HUMAN P00938 TRIOSEPHOSPHATE ISOMERASE ;, mRNA sequence."								

211430_s_at	Hs.510635									

201264_at	Hs.10326	"coatomer protein complex, subunit epsilon"								

200737_at	Hs.78771	phosphoglycerate kinase 1								

203028_s_at	Hs.513803	"cytochrome b-245, alpha polypeptide"								

207571_x_at	Hs.10649	chromosome 1 open reading frame 38								

203617_x_at	Hs.181128	"ELK1, member of ETS oncogene family"								

202343_x_at	Hs.1342		cytochrome c oxidase subunit Vb								

217995_at	Hs.511251	sulfide quinone reductase-like (yeast)								

202110_at	Hs.522699	cytochrome c oxidase subunit VIIb								

201483_s_at	Hs.439481	suppressor of Ty 4 homolog 1 (S. cerevisiae)								

209628_at	Hs.25010	nuclear transport factor 2-like export factor 2								

211047_x_at	Hs.119591	"adaptor-related protein complex 2, sigma 1 subunit"								

217827_s_at	Hs.242458	acid cluster protein 33								

209397_at	Hs.233119	"malic enzyme 2, NAD(+)-dependent, mitochondrial"								

202675_at	Hs.465924	"succinate dehydrogenase complex, subunit B, iron sulfur (Ip)"								

219079_at	Hs.5741		NADPH cytochrome B5 oxidoreductase								

203781_at	Hs.515879	mitochondrial ribosomal protein L33								

202592_at	Hs.94672	GCN5 general control of amino-acid synthesis 5-like 1 (yeast)								

										
										
OVER-EXPRESSED: 
P<0.01 FLU; 
P>0.5 SLE - C2	
								
208087_s_at	Hs.302123	Z-DNA binding protein 1								

219996_at	Hs.31845	ankyrin repeat and SOCS box-containing 7								

203653_s_at	Hs.532795	coilin								

217765_at	Hs.515876	nuclear receptor binding protein								

210443_x_at	Hs.67896	opioid growth factor receptor								

212505_s_at	Hs.112751	KIAA0892 protein								

53720_at	Hs.175120	angiopoietin-like 6								

213893_x_at	Hs.397073	Homo sapiens transcribed sequence with strong similarity to protein pir:JC2399 (H.sapiens) JC2399 PMS4 homolog mismatch repair protein - human								

200675_at	Hs.54457	CD81 antigen (target of antiproliferative antibody 1)								

215364_s_at	Hs.301943	KIAA0467 protein								

212251_at	Hs.377155	LYRIC/3D3								

210846_x_at	Hs.555909	tripartite motif-containing 14								

203147_s_at	Hs.555909	tripartite motif-containing 14								

201680_x_at	Hs.111801	arsenate resistance protein ARS2								

219112_at	---		PDZ domain containing guanine nucleotide exchange factor (GEF) 2								

218143_s_at	Hs.458917	secretory carrier membrane protein 2								

202123_s_at	Hs.431048	v-abl Abelson murine leukemia viral oncogene homolog 1								

212101_at	Hs.470588	karyopherin alpha 6 (importin alpha 7)								

212601_at	Hs.277624	KIAA0399 protein								

32209_at	Hs.25723	Mouse Mammary Turmor Virus Receptor homolog 1							

218429_s_at	Hs.175120	hypothetical protein FLJ11286								

213763_at	Hs.397465	homeodomain interacting protein kinase 2								

202073_at	Hs.332706	optineurin								

219673_at	Hs.279008	chromosome 6 open reading frame 61								

219006_at	Hs.512144	chromosome 6 open reading frame 66								

208784_s_at	Hs.412468	kelch domain containing 3								

202841_x_at	Hs.67896	opioid growth factor receptor								

209518_at	Hs.79335	"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1"								

202269_x_at	Hs.62661	"guanylate binding protein 1, interferon-inducible, 67kDa"								

207824_s_at	Hs.23650	MYC-associated zinc finger protein (purine-binding transcription factor)								

211300_s_at	Hs.408312	tumor protein p53 (Li-Fraumeni syndrome)								

221851_at	Hs.443636	hypothetical protein BC002926								

204804_at	Hs.532357	"Sjogren syndrome antigen A1 (52kDa, ribonucleoprotein autoantigen SS-A/Ro)"								

212569_at	Hs.8118		KIAA0650 protein								

201246_s_at	Hs.473788	ubiquitin-specific protease otubain 1								

211136_s_at	Hs.444441	cleft lip and palate associated transmembrane protein 1								

201282_at	Hs.488181	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)								

209137_s_at	Hs.136778	ubiquitin specific protease 10								

219613_s_at	Hs.423756	sirtuin (silent mating type information regulation 2 homolog) 6 (S. cerevisiae)								

210378_s_at	Hs.530314	Sjogren's syndrome nuclear autoantigen 1								

205400_at	Hs.2157		Wiskott-Aldrich syndrome (eczema-thrombocytopenia)								

221882_s_at	Hs.288940	transmembrane protein 8 (five membrane-spanning domains)								

201864_at	Hs.74576	GDP dissociation inhibitor 1								

37462_i_at	Hs.115232	"Human spliceosomal protein (SAP 62) gene, complete cds."								

632_at		Hs.466828	glycogen synthase kinase 3 alpha								

201895_at	Hs.446641	v-raf murine sarcoma 3611 viral oncogene homolog 1								

218010_x_at	Hs.79625	chromosome 20 open reading frame 149								

209760_at	Hs.205572	"KIAA0922, elongation; Homo sapiens mRNA; cDNA DKFZp586H1322 (from clone DKFZp586H1322); complete cds."								

205207_at	Hs.512234	"interleukin 6 (interferon, beta 2)"								

201377_at	Hs.490551	NICE-4 protein								

205682_x_at	Hs.534468	apolipoprotein M								

203728_at	Hs.485139	BCL2-antagonist/killer 1								

211572_s_at	Hs.516866	"solute carrier family 23 (nucleobase transporters), member 2"								

212218_s_at	Hs.83190	F-box only protein 9								

55081_at	Hs.517610	molecule interacting with Rab13								

45572_s_at	Hs.499158	"golgi associated, gamma adaptin ear containing, ARF binding protein 1"								

217497_at	Hs.546251	endothelial cell growth factor 1 (platelet-derived)								

77508_r_at	Hs.555978	Fos-related antigen								

213931_at	Hs.148340	Homo sapiens transcribed sequence with strong similarity to protein pir:A40227 (H.sapiens) A40227 transcription repressor Id-2 - human		

1598_g_at	Hs.369201	growth arrest-specific 6								

213523_at	Hs.244723	cyclin E1								

209744_x_at	Hs.472509	itchy homolog E3 ubiquitin protein ligase (mouse)								

219040_at	Hs.7258		hypothetical protein FLJ22021								

218655_s_at	Hs.406223	hypothetical protein FLJ20291								

211947_s_at	Hs.494614	HBxAg transactivated protein 2								

212069_s_at	Hs.495349	hypothetical protein MGC10526								

220748_s_at	Hs.94392	LDL induced EC protein								

202725_at	Hs.270017	"polymerase (RNA) II (DNA directed) polypeptide A, 220kDa"								

214847_s_at	Hs.520046	"602281582F1 NIH_MGC_86 Homo sapiens cDNA clone IMAGE:4369100 5', mRNA sequence."								

208842_s_at	Hs.431317	"golgi reassembly stacking protein 2, 55kDa"								

203388_at	Hs.435811	"arrestin, beta 2"								

41386_i_at	---		KIAA0346 protein								

205909_at	Hs.162777	"polymerase (DNA directed), epsilon 2 (p59 subunit)"								

203052_at	Hs.408903	complement component 2								

212558_at	Hs.436944	ganglioside-induced differentiation-associated protein 1-like 1								

33768_at	Hs.584752	dystrophia myotonica-containing WD repeat motif								

217419_x_at	Hs.273330	agrin								

202221_s_at	Hs.517517	E1A binding protein p300								

222139_at	Hs.147710	KIAA1466 protein								

213504_at	Hs.15591	COP9 constitutive photomorphogenic homolog subunit 6 (Arabidopsis)								

206332_s_at	Hs.380250	"interferon, gamma-inducible protein 16"								

204001_at	Hs.546299	"small nuclear RNA activating complex, polypeptide 3, 50kDa"								

202270_at	Hs.62661	"guanylate binding protein 1, interferon-inducible, 67kDa"								

AFFX-HUMISGF3A/	---		"Homo sapiens transcription factor ISGF-3 mRNA, complete cds."	

M97935_5_at									

203593_at	Hs.485518	CD2-associated protein								

209100_at	Hs.315177	interferon-related developmental regulator 2							

208968_s_at	Hs.4900		hypothetical protein LOC57019								

212285_s_at	Hs.273330	agrin								

201378_s_at	Hs.490551	NICE-4 protein								

204813_at	Hs.125503	mitogen-activated protein kinase 10								

209011_at	Hs.130031	triple functional domain (PTPRF interacting)								

201128_s_at	Hs.387567	ATP citrate lyase								
		
										
										
UNDER-EXPRESSED:
P<0.01 SLE; 
P>0.5 FLU - C3	
									
222330_at	Hs.445711	Homo sapiens transcribed sequences								

205372_at	Hs.14968	pleiomorphic adenoma gene 1								

221311_x_at	Hs.112909	hypothetical protein dJ122O8.2								

209139_s_at	Hs.405537	"protein kinase, interferon-inducible double stranded RNA dependent activator"								

207755_at	---									

205559_s_at	Hs.368542	proprotein convertase subtilisin/kexin type 5								

214972_at	Hs.500842	meningioma expressed antigen 5 (hyaluronidase)								

76897_s_at	Hs.522351	KIAA0674 protein								

209504_s_at	Hs.445489	"pleckstrin homology domain containing, family B (evectins) member 1"								

210690_at	Hs.268510	"killer cell lectin-like receptor subfamily C, member 4"								

212966_at	Hs.517434	hypermethylated in cancer 2								

207596_at	---		"synonym: PRO2176; Homo sapiens OATPX protein (OATPX), mRNA."								

209574_s_at	Hs.149363	chromosome 18 open reading frame 1								

203203_s_at	Hs.584861	HIV-1 rev binding protein 2								

202268_s_at	Hs.460978	"amyloid beta precursor protein binding protein 1, 59kDa"								

213958_at	Hs.502710	CD6 antigen								

202969_at	Hs.173135	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2								

214252_s_at	Hs.30213	"AV700514 GKC Homo sapiens cDNA clone GKCDQC04 3', mRNA sequence."								

216823_at	Hs.356572									

213743_at	Hs.292754	cyclin T2								

208026_at	Hs.247816	"histone 1, H4f"								

215204_at	---		"Homo sapiens cDNA FLJ14090 fis, clone MAMMA1000264."								

205799_s_at	Hs.112916	"solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1"						

217353_at	Hs.556099	"Human DNA sequence from clone RP1-256G22 on chromosome 6p24.1-25.3, complete sequence."								

204432_at	Hs.43627	SRY (sex determining region Y)-box 12								

214848_at	Hs.492407	"Homo sapiens similar to 40S ribosomal protein S26 (LOC375677), mRNA"								

215718_s_at	Hs.348921	"wq20e12.x1 NCI_CGAP_Gas4 Homo sapiens cDNA clone IMAGE:2471854 3' similar to TR:Q92576 Q92576 MYELOBLAST KIAA0244 ;, mRNA sequence."								

212105_s_at	Hs.191518	DEAH (Asp-Glu-Ala-His) box polypeptide 9								

205934_at	Hs.153322	phospholipase C-like 1								

209913_x_at	---		KIAA0415 gene product								

216261_at	Hs.218040	"integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)"								

222370_x_at	Hs.369054	Homo sapiens transcribed sequence with weak  similarity to protein ref:NP_060312.1 (H.sapiens)  hypothetical protein FLJ20489 [Homo sapiens]								

212297_at	Hs.529609	ATPase family homolog up-regulated in senescence cells								

218277_s_at	Hs.29403	DEAH (Asp-Glu-Ala-His) box polypeptide 40								

215383_x_at	Hs.242458	acid cluster protein 33								

204793_at	Hs.522730	G protein-coupled receptor-associated sorting protein								

202266_at	Hs.403010	TRAF and TNF receptor associated protein								

213135_at	Hs.517228	T-cell lymphoma invasion and metastasis 1								

202524_s_at	Hs.523009	"sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2"								

203526_s_at	Hs.158932	adenomatosis polyposis coli								

203375_s_at	Hs.432424	tripeptidyl peptidase II								

214716_at	Hs.146551	BMP2 inducible kinase								

220460_at	Hs.47261	"solute carrier organic anion transporter family, member 1C1"								

214855_s_at	Hs.113150	GTPase activating RANGAP domain-like 2								

214688_at	Hs.444213	"transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)"								

207845_s_at	Hs.480876	anaphase-promoting complex subunit 10								

202183_s_at	Hs.119324	kinesin family member 22								

221919_at	---		heterogeneous nuclear ribonucleoprotein A1								

217142_at	---		"Human DNA sequence from clone RP1-142O9 on chromosome 6p11.1-12.3, complete sequence."								

200607_s_at	Hs.81848	RAD21 homolog (S. pombe)								

217713_x_at	Hs.369471	Homo sapiens transcribed sequence with weak  similarity to protein ref:NP_060312.1 (H.sapiens)  hypothetical protein FLJ20489 [Homo sapiens]								

209481_at	Hs.476052	"Homo sapiens HSNFRK (HSNFRK) mRNA, complete cds."								

202165_at	Hs.567321	"protein phosphatase 1, regulatory (inhibitor) subunit 2"								

202747_s_at	Hs.17109	integral membrane protein 2A								

212413_at	Hs.496666	septin 6								

221905_at	Hs.432993	cylindromatosis (turban tumor syndrome)								

203874_s_at	Hs.152292	"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1"								

215366_at	Hs.487648	KIAA0713 (Homo sapiens); Homo sapiens mRNA; cDNA DKFZp761E0611 (from clone DKFZp761E0611).								

214081_at	Hs.125036	plexin domain containing 1								

203387_s_at	Hs.210891	"TBC1 domain family, member 4"								

210424_s_at	Hs.182982	golgin-67								

209726_at	Hs.428446	carbonic anhydrase XI								

213370_s_at	Hs.343679	Scm-like with four mbt domains 1								

221207_s_at	Hs.491172	neurobeachin								

212107_s_at	Hs.191518	DEAH (Asp-Glu-Ala-His) box polypeptide 9								

211681_s_at	Hs.480311	LIM protein (similar to rat protein kinase C-binding enigma)								

221508_at	---		STE20-like kinase								

208410_x_at	Hs.46329	"amelogenin (amelogenesis imperfecta 1, X-linked)"								

209997_x_at	Hs.491148	pericentriolar material 1								

205218_at	Hs.472227	"polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa"							

216220_s_at	Hs.77867	adenosine A1 receptor								

220115_s_at	Hs.92489	"cadherin 10, type 2 (T2-cadherin)"								

204992_s_at	Hs.91747	profilin 2								

211721_s_at	Hs.184846	hypothetical protein BC005868								

56919_at	Hs.109778	"golgi reassembly stacking protein 1, 65kDa"								

202970_at	Hs.173135	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2								

78383_at	Hs.535961	"Homo sapiens, clone IMAGE:4152599, mRNA, partial cds"								

201139_s_at	Hs.546301	Sjogren syndrome antigen B (autoantigen La)								

203188_at	Hs.8526		"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6"								

217659_at	Hs.203099	Homo sapiens transcribed sequence with weak  similarity to protein ref:NP_060312.1 (H.sapiens)  hypothetical protein FLJ20489 [Homo sapiens]								

207216_at	Hs.494901	"tumor necrosis factor (ligand) superfamily, member 8"								

211828_s_at	Hs.34024	Traf2 and NCK interacting kinase								

210034_s_at	Hs.449095	ribosomal protein L5								

207283_at	Hs.567545	"spectrin, beta, non-erythrocytic 1"								

209953_s_at	Hs.160958	CDC37 cell division cycle 37 homolog (S. cerevisiae)								

215009_s_at	Hs.370024	yeast Sec31p homolog								

219535_at	Hs.109437	hormonally upregulated Neu-associated kinase								

221537_at	Hs.585335	hypothetical protein DKFZp564A176								

217394_at	Hs.508883									

214823_at	Hs.8198		"Homo sapiens C2H2 zinc finger protein pseudogene, mRNA sequence"								

215262_at	Hs.142570	Homo sapiens clone 24629 mRNA sequence								

206546_at	Hs.202676	synaptonemal complex protein 2								

219495_s_at	Hs.130683	zinc finger protein 180 (HHZ168)								

204699_s_at	Hs.194754	hypothetical protein MGC29875								

203202_at	Hs.584861	HIV-1 rev binding protein 2								

206744_s_at	Hs.530988	zinc finger protein 237							

202407_s_at	Hs.515598	PRP31 pre-mRNA processing factor 31 homolog (yeast)								

33148_at	Hs.435231	zinc finger RNA binding protein								

201070_x_at	Hs.567433	"splicing factor 3b, subunit 1, 155kDa"								

210268_at	Hs.413074	"nuclear transcription factor, X-box binding 1"								

200751_s_at	Hs.508848	heterogeneous nuclear ribonucleoprotein C (C1/C2)								

205245_at	Hs.112933	par-6 partitioning defective 6 homolog alpha (C.elegans)								

201182_s_at	Hs.162233	chromodomain helicase DNA binding protein 4								

205511_at	Hs.511316	"GA binding protein transcription factor, beta subunit 2, 47kDa"								

221757_at	Hs.26670									

217610_at	---		"Homo sapiens cDNA FLJ38765 fis, clone KIDNE2014489."								

202979_s_at	Hs.535319	HCF-binding transcription factor Zhangfei								

222099_s_at	Hs.407368	DKFZP434D1335 protein								

216288_at	Hs.201300	"AU159276 THYRO1 Homo sapiens cDNA clone THYRO1001262 3', mRNA sequence."								

207735_at	Hs.272800	ring finger protein 125								

208120_x_at	---									

211085_s_at	Hs.472838	serine/threonine kinase 4								

220796_x_at	Hs.134074	"solute carrier family 35, member E1"								

208994_s_at	Hs.470544	peptidyl-prolyl isomerase G (cyclophilin G)								

206648_at	Hs.567496	HSPC059 protein								

206636_at	Hs.98445	RAS p21 protein activator 2								

220368_s_at	Hs.533887	KIAA2010								

206792_x_at	Hs.437211	"phosphodiesterase 4C, cAMP-specific (phosphodiesterase E1 dunce homolog, Drosophila)"								

216242_x_at	Hs.571355	Homo sapiens mRNA; cDNA DKFZp686J18198 (from clone DKFZp686J18198)								

214066_x_at	Hs.78518	natriuretic peptide receptor B/guanylate cyclase B (atrionatriuretic peptide receptor B)								

221558_s_at	Hs.555947	lymphoid enhancer-binding factor 1								

219864_s_at	Hs.468261	"synonym: MCIP3; putative; Down syndrome candidate region 1-like 2; go_function: RNA binding [goid 0003723] [evidence TAS] [pmid 10756093]; go_process: embryogenesis and morphogenesis       						[goid 0007345] [evidence TAS] [pmid 10756093]; go_process: calcium-mediated signaling [goid 0019722] [evidence IEA]; Homo sapiens Down syndrome critical region gene 1-like 2 (DSCR1L2), mRNA."		

200914_x_at	Hs.509414	"naa40c08.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:3258639 3' similar to TR:Q13999 Q13999 CG1 PROTEIN ;, mRNA sequence."								

210892_s_at	Hs.520459	"general transcription factor II, i"								

220048_at	Hs.171971	"ectodysplasin 1, anhidrotic receptor"								

209746_s_at	Hs.157113	"coenzyme Q7 homolog, ubiquinone (yeast)"								

214197_s_at	Hs.516278	"SET domain, bifurcated 1"								

205510_s_at	Hs.511316	"GA binding protein transcription factor, beta subunit 2, 47kDa"								

209023_s_at	Hs.496710	stromal antigen 2								

212744_at	Hs.208681	Bardet-Biedl syndrome 4								

221826_at	Hs.157078	similar to RIKEN cDNA 2610307I21								

208903_at	Hs.557301	FLJ46061 protein								

202137_s_at	Hs.292265	adenovirus 5 E1A binding protein								

218259_at	Hs.49143	myocardin-related transcription factor B								

218425_at	Hs.487458	TRIAD3 protein								

210568_s_at	Hs.235069	RecQ protein-like (DNA helicase Q1-like)								

210607_at	Hs.428		fms-related tyrosine kinase 3 ligand								

218532_s_at	Hs.481704	hypothetical protein FLJ20152								

206976_s_at	Hs.36927	heat shock 105kDa/110kDa protein 1								

218754_at	Hs.59425	hypothetical protein FLJ23323								

205250_s_at	Hs.150444	KIAA0373 gene product								

206337_at	Hs.370036	chemokine (C-C motif) receptor 7								

214251_s_at	Hs.558362	nuclear mitotic apparatus protein 1								

202479_s_at	Hs.467751	tribbles homolog 2								

201115_at	Hs.306791	"polymerase (DNA directed), delta 2, regulatory subunit 50kDa"								

202971_s_at	Hs.173135	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2								

211464_x_at	Hs.3280		"caspase 6, apoptosis-related cysteine protease"								

219156_at	Hs.443661	synaptojanin 2 binding protein								

201837_s_at	Hs.6232		SPTF-associated factor 65 gamma								

201977_s_at	Hs.210532	KIAA0141 gene product								

203580_s_at	Hs.559983	"solute carrier family 7 (cationic amino acid transporter, y+ system), member 6"								

201836_s_at	Hs.6232		SPTF-associated factor 65 gamma								

221899_at	Hs.507680	hypothetical protein from BCRA2 region								

202182_at	Hs.463045	GCN5 general control of amino-acid synthesis 5-like 2 (yeast)								

217729_s_at	Hs.515053	amino-terminal enhancer of split								

211795_s_at	Hs.370503	FYN binding protein (FYB-120/130)								

217547_x_at	Hs.264345	TRAF6-inhibitory zinc finger protein								

218510_x_at	Hs.481704	hypothetical protein FLJ20152								

41329_at	Hs.435560	ezrin-binding partner PACE-1								

213803_at	Hs.532793	karyopherin (importin) beta 1							

218428_s_at	Hs.443077	REV1-like (yeast)								

212454_x_at	Hs.527105	heterogeneous nuclear ribonucleoprotein D-like								

218430_s_at	Hs.282855	hypothetical protein FLJ12994								

203579_s_at	Hs.559983	"solute carrier family 7 (cationic amino acid transporter, y+ system), member 6"								

203804_s_at	Hs.130293	cisplatin resistance-associated overexpressed protein								

212709_at	Hs.372099	nucleoporin 160kDa								

221221_s_at	Hs.434434	kelch-like 3 (Drosophila)								

209927_s_at	Hs.371788	DKFZP547E1010 protein								

201424_s_at	Hs.339735	cullin 4A								

209884_s_at	Hs.250072	"solute carrier family 4, sodium bicarbonate cotransporter, member 7"								

218764_at	Hs.333907	"synonyms: PKCL, PKC-L, PRKCL, MGC5363; go_function: protein kinase C activity [goid 0004697] [evidence E] [pmid 1986216]; go_process: protein amino acid phosphorylation [goid 0006468]  						[evidence E] [pmid 1986216]; go_process: signal transduction [goid 0007165] [evidence P] [pmid 1986216]; Homo sapiens protein kinase C, eta (PRKCH), mRNA."						

218124_at	Hs.440401	hypothetical protein FLJ20296								

204651_at	Hs.298069	nuclear respiratory factor 1								

204773_at	Hs.558346	"interleukin 11 receptor, alpha"								

213278_at	Hs.528673	myotubularin related protein 9								

205661_s_at	Hs.118666	FAD-synthetase								
										
										
									
UNDER-EXPRESSED: 
P<0.01 FLU; 
P>0.5 SLE - C4	
									
206100_at	Hs.567251	0.00918		carboxypeptidase M							

201506_at	Hs.369397	0.000506	"transforming growth factor, beta-induced, 68kDa"							

37384_at	Hs.112728	0.00687		protein phosphatase 1F (PP2C domain containing)							

207573_x_at	Hs.486360	3.03E-05	"ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g"							

210241_s_at	Hs.274329	0.00178		TP53 activated protein 1							

212829_at	Hs.57079	0.00921		"Homo sapiens cDNA FLJ13267 fis, clone OVARC1000964."							

204227_s_at	Hs.512619	0.00921		"thymidine kinase 2, mitochondrial"							

208370_s_at	Hs.282326	0.00918		Down syndrome critical region gene 1							

209513_s_at	Hs.59486	3.03E-05	hypothetical protein MGC10940							

204906_at	Hs.147119	0.00257		"ribosomal protein S6 kinase, 90kDa, polypeptide 2"							

218557_at	Hs.439152	0.00257		Nit protein 2							

202929_s_at	Hs.433902	0.00257		D-dopachrome tautomerase							

209318_x_at	Hs.444975	0.00687		pleiomorphic adenoma gene-like 1							

203621_at	Hs.518424	0.0012		"NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa"							

212526_at	Hs.440414	0.00685		"spastic paraplegia 20, spartin (Troyer syndrome)"							

218502_s_at	Hs.253594	0.00178		trichorhinophalangeal syndrome I							

221472_at	Hs.272168	0.00921		tumor differentially expressed 1							

200760_s_at	Hs.518060	0.00079		cytoskeleton related vitamin A responsive protein							

200761_s_at	Hs.518060	0.000313	cytoskeleton related vitamin A responsive protein							

201413_at	Hs.406861	0.000313	hydroxysteroid (17-beta) dehydrogenase 4							

208877_at	Hs.518530	0.0012		p21 (CDKN1A)-activated kinase 2							

204559_s_at	Hs.512610	0.00363		"LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)"							

208643_s_at	Hs.388739	0.00257		"X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining; Ku autoantigen, 80kDa)"							

209934_s_at	Hs.584884	0.00687		"ATPase, Ca++ transporting, type 2C, member 1"							

217790_s_at	Hs.518346	0.00504		"signal sequence receptor, gamma (translocon-associated protein gamma)"							

218450_at	Hs.294133	0.00687		heme binding protein 1							

212010_s_at	Hs.518265	0.00504		hypothetical protein H41							

217982_s_at	Hs.374503	0.00178		mortality factor 4 like 1							

210774_s_at	Hs.522932	0.0012		nuclear receptor coactivator 4							

208746_x_at	Hs.486360	1.47E-05	"ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g"							

202279_at	Hs.109052	0.000107	chromosome 14 open reading frame 2							

200833_s_at	Hs.369920	0.00363		"RAP1B, member of RAS oncogene family"							

200080_s_at	Hs.533624	0.00257		"H3 histone, family 3A"							

204319_s_at	Hs.501200	0.00687		regulator of G-protein signalling 10							

211671_s_at	Hs.122926	0.000187								

217989_at	Hs.282984	0.000313	dehydrogenase/reductase (SDR family) member 8							

210453_x_at	Hs.486360	0.000506	"ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g"							

200008_s_at	Hs.299055	0.00921		GDP dissociation inhibitor 2							

202416_at	Hs.500156	0.00178		"DnaJ (Hsp40) homolog, subfamily C, member 7"							

201398_s_at	Hs.491988	0.000187	translocation associated membrane protein 1							

210759_s_at	Hs.102798	0.00687		"proteasome (prosome, macropain) subunit, alpha type, 1"							

208742_s_at	Hs.524899	0.00921		"sin3-associated polypeptide, 18kDa"							

218228_s_at	Hs.329327	0.00687		"tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2"							

200969_at	Hs.518326	0.00921		stress-associated endoplasmic reticulum protein 1							

208405_s_at	Hs.520313	0.00921		"CD164 antigen, sialomucin"							

217983_s_at	Hs.529989	0.00921		ribonuclease T2							

204690_at	Hs.431109	0.00687		syntaxin 8							

203265_s_at	Hs.514681	0.00921		mitogen-activated protein kinase kinase 4							

200981_x_at	Hs.125898	0.00687		GNAS complex locus							

201581_at	Hs.169358	0.000187	hypothetical protein DJ971N18.2							

208755_x_at	Hs.533624	3.03E-05	"H3 histone, family 3A"							

221607_x_at	Hs.514581	3.03E-05	"actin, gamma 1"							

213828_x_at	Hs.533624	0.000107	"H3 histone, family 3A"							

214097_at	Hs.190968	0.00079		ribosomal protein S21							

211997_x_at	Hs.180877	0.00921		"H3 histone, family 3B (H3.3B)"							

215313_x_at	Hs.584763	0.00363		"major histocompatibility complex, class I, A"							

209480_at	Hs.409934	0.00858		"major histocompatibility complex, class II, DQ beta 1"							

208623_s_at	Hs.487027	0.00921		villin 2 (ezrin)							

212886_at	Hs.132994	0.00363		DKFZP434C171 protein							

211654_x_at	Hs.409934	0.00079		"major histocompatibility complex, class II, DQ beta 1"							

213513_x_at	Hs.529303	0.00687		"actin related protein 2/3 complex, subunit 2, 34kDa"							

208756_at	Hs.530096	0.00257		"eukaryotic translation initiation factor 3, subunit 2 beta, 36kDa"							

217779_s_at	Hs.512636	0.00504		proline-rich nuclear receptor coactivator 2							

221791_s_at	Hs.356440	0.000107	hypothetical protein HSPC016												

										
