                         SEQUENCE LISTING

<110>  Universit de Lige
 
<120>  Probiotic Bifidobacterial Species

<130>  Daube2004-21

<160>  47    

<170>  PatentIn version 3.3

<210>  1
<211>  1428
<212>  DNA
<213>  Bifidobacterium psychraerophilum

<400>  1
gtcaggatga acgctggcgg cgtgcttaac acatgcaagt cgaacgggat ccatcaagct     60

tgcttgatgg tgagagtggc gaacgggtga gtaatacgtg actaacctgc ctcatacacc    120

ggaatagctc ctggaaacgg gtggtaatgc cggatgctcc aacatttcac atgttttgtt    180

gggaaagcgt tagcggtatg agatggggtc gcgtcctatc agcttgttgg tgaggtaatg    240

gctcaccaag gcttcgacgg gtagccggcc tgagagggcg accggccaca ttgggactga    300

gatacggccc agactcctac gggaggcagc agtggggaat attgcacaat gggcgaaagc    360

ctgatgcagc gacgccgcgt gcgggatgaa ggccttcggg ttgtaaaccg cttttaattg    420

ggagcaagcg agagtgagtg taccttttga ataagcaccg gctaactacg tgccagcagc    480

cgcggtaata cgtagggtgc aagcgttatc cggaattatt gggcgtaaag agctcgtagg    540

cggtttgtca cgcctggtgt gaaagtccat cgcttaacgg tggatctgcg ccgggtacgg    600

gcaggctaga gtgcagtagg ggagattgga attcccggtg taacggtgga atgtgtagat    660

atcgggaaga acaccaatgg cgaaggcaga tctctgggct gttactgacg ctgaggagcg    720

aaagcatggg gagcgaacag gattagatac cctggtagtc catgccgtaa acggtggatg    780

ctggatgtgg ggcccttcca cgggctccgt gtcggagcta acgcgttaag catcccgcct    840

ggggagtacg gccgcaaggc taaaactcaa agaaattgac gggggcccgc acaagcggcg    900

gagcatgcgg attaattcga tgcaacgcga agaaccttac ctaggcttga catgtttcgg    960

acagccccag agatggggtc tcccttcggg gccgattcac aggtggtgca tggtcgtcgt   1020

cagctcgtgt cgtgagatgt tgggttaagt cccgcaacga gcgcaaccct cgccttgtgt   1080

tgccagcacg ttatggtggg aactcacaag ggaccgccgg ggttaactcg gaggaaggtg   1140

gggatgacgt cagatcatca tgccccttac gtctagggct tcacgcatgc tacaatggcc   1200

ggtacaacga gatgcgacat ggcgacatga agcgaatctc ttaaaaccgg tctcagttcg   1260

gattggagcc tgcaactcgg ctccatgaag gcggagtcgc tagtaatcgc gaatcagcaa   1320

cgtcgcggtg aatgcgttcc cgggccttgt acacaccgcc cgtcaagtca tgaaagtggg   1380

tagcacccga agccggtggc ctaacctttt ggagggagcc gtctaagg                1428


<210>  2
<211>  1372
<212>  DNA
<213>  Bifidobacterium GC56

<400>  2
gtcgaacggg atccatcaag cttgcttgat ggtgagagtg gcgaacgggt gagtaatgcg     60

tgactaacct gcctcataca ccggaatagc tcctggaaac gggtggtaat gccggatgct    120

ccaacatttc acatgttttg ttgggaaagc gttagcggta tgagatgggg tcgcgtccta    180

tcagcttgtt ggtgaggtaa tggctcacca aggcttcgac gggtagccgg cctgagaggg    240

cgaccggcca cattgggact gagatacggc ccagactcct acgggaggca gcagtgggga    300

atattgcaca atgggcgaaa gcctgatgca gcgacgccgc gtgcgggatg aaggccttcg    360

ggttgtaaac cgcttttaat tgggagcaag cgagagtgag tgtacctttt gaataagcac    420

cggctaacta cgtgccagca gccgcggtaa tacgtagggt gcaagcgtta tccggaatta    480

ttgggcgtaa agagctcgta ggcggtttgt cacgcctggt gtgaaagtcc atcgcttaac    540

ggtggatctg cgccgggtac gggcaggcta gagtgcagta ggggagattg gaattcccgg    600

tgtaacggtg gaatgtgtag atatcgggaa gaacaccaat ggcgaaggca gatctctggg    660

ctgttactga cgctgaggag cgaaagcatg gggagcgaac aggattagat accctggtag    720

tccatgccgt aaacggtgga tgctggatgt gggacccttc cacgggttcc gtgtcggagc    780

taacgcgtta agcatcccgc ctggggagta cggccgcaag gctaaaactc aaagaaattg    840

acgggggccc gcacaagcgg cggagcatgc ggattaattc gatgcaacgc gaagaacctt    900

acctaggctt gacatgtttc ggacagcccc agagatgggg tctcccttcg gggccgattc    960

acaggtggtg catggtcgtc gtcagctcgt gtcgtgagat gttgggttaa gtcccgcaac   1020

gagcgcaacc ctcgccttgt gttgccagca cgttatggtg ggaactcaca agggaccgcc   1080

ggggttaact cggaggaagg tggggatgac gtcagatcat catgcccctt acgtctaggg   1140

cttcacgcat gctacaatgg ccggtacaac gagatgcgac atggcgacat gaagcgaatc   1200

tcttaaaacc ggtctcagtt cggattggag cctgcaactc ggctccatga aggcggagtc   1260

gctagtaatc gcgaatcagc aacgtcgcgg tgaatgcgtt cccgggcctt gtacacaccg   1320

cccgtcaagt catgaaagtg ggtagcaccc gaagccggtg gcctaacctt tt           1372


<210>  3
<211>  1356
<212>  DNA
<213>  Bifidobacterium GC56

<400>  3
atccatcaag cttgcttgat ggtgagagtg gcgaacgggt gagtaatgcg tgactaacct     60

gcctcataca ccggaatagc tcctggaaac gggtggtaat gccggatgct ccaacatttc    120

acatgttttg ttgggaaagc gttagcggta tgagatgggg tcgcgtccta tcagcttgtt    180

ggtgaggtaa tggctcacca aggcttcgac gggtagccgg cctgagaggg cgaccggcca    240

cattgggact gagatacggc ccagactcct acgggaggca gcagtgggga atattgcaca    300

atgggcgaaa gcctgatgca gcgacgccgc gtgcgggatg aaggccttcg ggttgtaaac    360

cgcttttaat tgggagcaag cgagagtgag tgtacctttt gaataagcac cggctaacta    420

cgtgccagca gccgcggtaa tacgtagggt gcaagcgtta tccggaatta ttgggcgtaa    480

agagctcgta ggcggtttgt cacgcctggt gtgaaagtcc atcgcttaac ggtggatctg    540

cgccgggtac gggcaggcta gagtgcagta ggggagattg gaattcccgg tgtaacggtg    600

gaatgtgtag atatcgggaa gaacaccaat ggcgaaggca gatctctggg ctgttactga    660

cgctgaggag cgaaagcatg gggagcgaac aggattagat accctggtag tccatgccgt    720

aaacggtgga tgctggatgt gggacccttc cacgggttcc gtgtcggagc taacgcgtta    780

agcatcccgc ctggggagta cggccgcaag gctaaaactc aaagaaattg acgggggccc    840

gcacaagcgg cggagcatgc ggattaattc gatgcaacgc gaagaacctt acctaggctt    900

gacatgtttc ggacagcccc agagatgggg tctcccttcg gggccgattc acaggtggtg    960

catggtcgtc gtcagctcgt gtcgtgagat gttgggttaa gtcccgcaac gagcgcaacc   1020

ctcgccttgt gttgccagca cgttatggtg ggaactcaca agggaccgcc ggggttaact   1080

cggaggaagg tggggatgac gtcagatcat catgcccctt acgtctaggg cttcacgcat   1140

gctacaatgg ccggtacaac gagatgcgac atggcgacat gaagcgaatc tcttaaaacc   1200

ggtctcagtt cggattggag cctgcaactc ggctccatga aggcggagtc gctagtaatc   1260

gcgaatcagc aacgtcgcgg tgaatgcgtt cccgggcctt gtacacaccg cccgtcaagt   1320

catgaaagtg ggtagcaccc gaagccggtg gcctaa                             1356


<210>  4
<211>  1384
<212>  DNA
<213>  Bifidobacterium GC56

<400>  4
agggatccat caagcttgct tgatggtgag agtggcgaac gggtgagtaa tgcgtgacta     60

acctgcctca tacaccggaa tagctcctgg aaacgggtgg taatgccgga tgctccaaca    120

tttcacatgt tttgttggga aagcgttagc ggtatgagat ggggtcgcgt cctatcagct    180

tgttggtgag gtaatggctc accaaggctt cgacgggtag ccggcctgag agggcgaccg    240

gccacattgg gactgagata cggcccagac tcctacggga ggcagcagtg gggaatattg    300

cacaatgggc gaaagcctga tgcagcgacg ccgcgtgcgg gatgaaggcc ttcgggttgt    360

aaaccgcttt taattgggag caagcgagag tgagtgtacc ttttgaataa gcaccggcta    420

actacgtgcc agcagccgcg gtaatacgta gggtgcaagc gttatccgga attattgggc    480

gtaaagagct cgtaggcggt ttgtcacgcc tggtgtgaaa gtccatcgct taacggtgga    540

tctgcgccgg gtacgggcag gctagagtgc agtaggggag attggaattc ccggtgtaac    600

ggtggaatgt gtagatatcg ggaagaacac caatggcgaa ggcagatctc tgggctgtta    660

ctgacgctga ggagcgaaag catggggagc gaacaggatt agataccctg gtagtccatg    720

ccgtaaacgg tggatgctgg atgtgggacc cttccacggg ttccgtgtcg gagctaacgc    780

gttaagcatc ccgcctgggg agtacggccg caaggctaaa actcaaagaa attgacgggg    840

gcccgcacaa gcggcggagc atgcggatta attcgatgca acgcgaagaa ccttacctag    900

gcttgacatg tttcggacag ccccagagat ggggtctccc ttcggggccg attcacaggt    960

ggtgcatggt cgtcgtcagc tcgtgtcgtg agatgttggg ttaagtcccg caacgagcgc   1020

aaccctcgcc ttgtgttgcc agcacgttat ggtgggaact cacaagggac cgccggggtt   1080

aactcggagg aaggtgggga tgacgtcaga tcatcatgcc ccttacgtct agggcttcac   1140

gcatgctaca atggccggta caacgagatg cgacatggcg acatgaagcg aatctcttaa   1200

aaccggtctc agttcggatt ggagcctgca actcggctcc atgaaggcgg agtcgctagt   1260

aatcgcgaat cagcaacgtc gcggtgaatg cgttcccggg ccttgtacac accgcccgtc   1320

aagtcatgaa agtgggtagc acccgaagcc ggtggcctaa ccttttggag ggagccgtct   1380

aagg                                                                1384


<210>  5
<211>  20
<212>  DNA
<213>  Bifidobacterium GC56

<400>  5
aatagctcct ggaaacgggt                                                 20


<210>  6
<211>  20
<212>  DNA
<213>  Bifidobacterium GC56

<400>  6
cgtaaggggc atgatgatct                                                 20


<210>  7
<211>  50
<212>  DNA
<213>  Bifidobacterium pseudocatenulatum

<400>  7
cgtcaccgcc ggctccaacc cgatcgcttt gcgtcgtggt atcgagaagg                50


<210>  8
<211>  50
<212>  DNA
<213>  Bifidobacterium GC56

<400>  8
cgtcgttgcg ggctccaacc ccatcgctct tcgtcgcggc atcgagaagg                50


<210>  9
<211>  50
<212>  DNA
<213>  Bifidobacterium GC56

<400>  9
cgtcgttgcg ggctccaacc ccatcgctct tcgtcgcggc atcgagaagg                50


<210>  10
<211>  50
<212>  DNA
<213>  Bifidobacterium adolescentis

<400>  10
cgtcaccgcc ggttccaacc cgatcgcgct gcgtcgtggc atcgagaagg                50


<210>  11
<211>  50
<212>  DNA
<213>  Bifidobacterium ruminantium

<400>  11
cgtcaccgcc ggctccaacc cgatcgcgct gcgtcgcggc atcgaaaagg                50


<210>  12
<211>  50
<212>  DNA
<213>  Bifidobacterium merycicum

<400>  12
cgtggtcgcc ggctccaacc cgatcgctct gcgtcgcggt atcgagaagg                50


<210>  13
<211>  50
<212>  DNA
<213>  Bifidobacterium angulatum

<400>  13
cgtggtcgcc ggctccaacc cgattgcgct gcgccgcggc attgaaaagg                50


<210>  14
<211>  45
<212>  DNA
<213>  Bifidobacterium GC56


<220>
<221>  misc_feature
<222>  (11)..(11)
<223>  n is a, c, g, or t

<400>  14
cgtttgtggc nttagccatc gctcttcgtc gcggcatcga gaagg                     45


<210>  15
<211>  31
<212>  DNA
<213>  Bifidobacterium GC56

<400>  15
gccatcgctc ttcgtcgcgg catcgagaag g                                    31


<210>  16
<211>  50
<212>  DNA
<213>  Bifidobacterium pseudocatenulatum

<400>  16
cttccgaagc catcgtcaag gagcttatcg cagctgccaa ggacgttgag                50


<210>  17
<211>  50
<212>  DNA
<213>  Bifidobacterium GC56

<400>  17
cctcagacgc catcgtcaag gagctgattt ccgcagccaa ggacgttgag                50


<210>  18
<211>  50
<212>  DNA
<213>  Bifidobacterium GC56

<400>  18
cctcagacgc catcgtcaag gagctgattt ccgcagccaa ggacgttgag                50


<210>  19
<211>  50
<212>  DNA
<213>  Bifidobacterium adolescentis

<400>  19
ccgccgacgc catcgtcaag gaactcgtcg cagcggccaa ggacgttgag                50


<210>  20
<211>  50
<212>  DNA
<213>  Bifidobacterium ruminantium

<400>  20
cttccgacgc cattgtcaag gaacttgtcg cggccgccaa ggatgtcgag                50


<210>  21
<211>  50
<212>  DNA
<213>  Bifidobacterium merycicum

<400>  21
ccaccgaagt catcgtcaag gaactcgtcg ccgccgccaa ggacgtcgag                50


<210>  22
<211>  50
<212>  DNA
<213>  Bifidobacterium angulatum

<400>  22
ccgccgacgc catcgtcaag gaactcgtcg cagccgccaa ggacgtcgag                50


<210>  23
<211>  49
<212>  DNA
<213>  Bifidobacterium GC56

<400>  23
ctcagacgcc atcgtcaagg agctgatttc cgcagccaag gacgttgag                 49


<210>  24
<211>  50
<212>  DNA
<213>  Bifidobacterium GC56

<400>  24
cctcagacgc catcgtcaag gagctgattt ccgcagccaa ggacgttgag                50


<210>  25
<211>  50
<212>  DNA
<213>  Bifidobacterium pseudocatenulatum

<400>  25
accaaggatc agatcgccgc taccgcaacg atttccgccg ccgatccgga                50


<210>  26
<211>  50
<212>  DNA
<213>  Bifidobacterium GC56

<400>  26
accaaggatc agatcgccgc gacggcaacg atctccgcgg ccgatcccga                50


<210>  27
<211>  50
<212>  DNA
<213>  Bifidobacterium GC56

<400>  27
accaaggatc agatcgccgc gacggcaacg atctccgcgg ccgatcccga                50


<210>  28
<211>  50
<212>  DNA
<213>  Bifidobacterium adolescentis

<400>  28
accaaggatc agatcgctgc caccgcaacg atctccgccg ctgatccgga                50


<210>  29
<211>  50
<212>  DNA
<213>  Bifidobacterium ruminantium

<400>  29
accaaggacc agatcgctgc caccgcaacg atctccgccg ctgatccgga                50


<210>  30
<211>  50
<212>  DNA
<213>  Bifidobacterium merycicum

<400>  30
accaaggatc agatcgctgc cactgctacg atctccgccg ccgatcctga                50


<210>  31
<211>  50
<212>  DNA
<213>  Bifidobacterium angulatum

<400>  31
accaaggatc agatcgctgc caccgcaacg atttccgccg ccgatcccga                50


<210>  32
<211>  50
<212>  DNA
<213>  Bifidobacterium GC56

<400>  32
accaaggatc agatcgccgc gacggcaacg atctccgcgg ccgatcccga                50


<210>  33
<211>  50
<212>  DNA
<213>  Bifobacterium GC56

<400>  33
accaaggatc agatcgccgc gacggcaacg atctccgcgg ccgatcccga                50


<210>  34
<211>  50
<212>  DNA
<213>  Bifidobacterium pseudocatenulatum

<400>  34
agtcggcgag aagatcgccg aagctcttga caaggttggc caggacggcg                50


<210>  35
<211>  48
<212>  DNA
<213>  Bifidobacterium GC56

<400>  35
ggttggcgag aagatcgccg aagctctgga caaggtcggc caggacgg                  48


<210>  36
<211>  49
<212>  DNA
<213>  Bifidobacterium GC56

<400>  36
ggttggcgag aagatcgccg aagctctgga caaggtcggc caggacggt                 49


<210>  37
<211>  50
<212>  DNA
<213>  Bifidobacterium adolescentis

<400>  37
agtcggcgag aagatcgccg aagctctgga caaggtcggc caggatggcg                50


<210>  38
<211>  50
<212>  DNA
<213>  Bifidobacterium ruminantium

<400>  38
agtcggcgag aagatcgccg aagctctgga caaggtcggc caggacggtg                50


<210>  39
<211>  50
<212>  DNA
<213>  Bifidobacterium merycicum

<400>  39
ggttggtgag aagatcgccg aagccctgga caaggtcggc caggatggcg                50


<210>  40
<211>  50
<212>  DNA
<213>  Bifidobacterium angulatum

<400>  40
ggttggcgag aagatcgccg aagccctgga caaggttggc caggacggcg                50


<210>  41
<211>  48
<212>  DNA
<213>  Bifidobacterium GC56

<400>  41
ggttggcgag aagatcgccg aagctctgga caaggtcggc caggacgg                  48


<210>  42
<211>  49
<212>  DNA
<213>  Bifidobacterium GC56

<400>  42
ggttggcgag aagatcgccg aagctctgga caaggtcggc caggacggt                 49


<210>  43
<211>  23
<212>  DNA
<213>  Bifidobacterium GC56

<400>  43
atttccgcag ccaaggacgt tga                                             23


<210>  44
<211>  20
<212>  DNA
<213>  Bifidobacterium GC56

<400>  44
atttccgcag ccaaggacgt                                                 20


<210>  45
<211>  21
<212>  DNA
<213>  Bifidobacterium GC56

<400>  45
tccagagctt cggcgatctt c                                               21


<210>  46
<211>  20
<212>  DNA
<213>  Bifidobacterium 


<220>
<221>  misc_feature
<223>  s = g or c; y = c or t; r=g or a

<400>  46
gtscaygarg gyctsaagaa                                                 20


<210>  47
<211>  20
<212>  DNA
<213>  Bifidobacterium 

<400>  47
cgtaaggggc atgatgatct                                                 20


